FFCP PHASE1:Hg19::chr14:56585183..56585203,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:56585183..56585203,+
|short_description=p3@PELI2
|description=CAGE_peak_3_at_PELI2_5end
|association_with_transcript=90bp_to_ENST00000267460,NM_021255,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57161 | |EntrezGene=57161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8828 | |HGNC=8828 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAT8,Q9H716 | |UniProt=Q9HAT8,Q9H716 | ||
|association_with_transcript=90bp_to_ENST00000267460,NM_021255,uc001xch.2_5end | |||
|cluster_id=chr14:56585183..56585203,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_PELI2_5end | |||
|id=chr14:56585183..56585203,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.52e-29!76;CL:0002057!2.13e-28!42;CL:0000860!4.81e-27!45;CL:0000738!8.91e-26!140;CL:0000839!2.79e-23!70;CL:0002194!1.10e-22!63;CL:0000576!1.10e-22!63;CL:0000040!1.10e-22!63;CL:0000559!1.10e-22!63;CL:0000557!1.93e-22!71;CL:0002009!1.02e-21!65;CL:0002087!2.75e-21!119;CL:0002031!8.51e-21!124;CL:0000037!4.10e-20!172;CL:0000566!4.10e-20!172;CL:0002032!1.16e-18!165;CL:0000837!1.16e-18!165;CL:0000763!3.99e-18!112;CL:0000049!3.99e-18!112;CL:0000988!4.95e-18!182;CL:0002393!4.39e-07!9;CL:0002397!4.39e-07!9;CL:0000094!5.12e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-49;33!CL:0002057;2.24e-49;33!CL:0000576;2.96e-40;48!CL:0000473;7.44e-36;39!CL:0000234;7.44e-36;39!CL:0000766;1.27e-28;69!CL:0002087;1.09e-14;104!CL:0000763;5.46e-14;100!CL:0000094;3.99e-13;8!CL:0000738;5.89e-13;136!CL:0002393;7.19e-12;6!CL:0002397;7.19e-12;6!CL:0000081;3.89e-09;11!CL:0000775;1.06e-07;3!CL:0000988;3.04e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-70,42;CL:0002057,1.23e-70,42;CL:0000766,1.26e-63,72;CL:0000473,5.51e-63,48;CL:0000234,5.51e-63,48;CL:0002194,1.49e-52,59;CL:0000576,1.49e-52,59;CL:0000040,1.49e-52,59;CL:0000559,1.49e-52,59;CL:0002009,2.15e-50,61;CL:0000839,7.15e-50,66;CL:0000738,7.18e-50,136;CL:0000557,6.39e-49,67;CL:0002087,1.20e-43,115;CL:0002031,3.23e-39,120;CL:0000763,1.15e-38,108;CL:0000049,1.15e-38,108;CL:0000037,6.17e-38,168;CL:0002032,3.44e-36,161;CL:0000837,3.44e-36,161;CL:0000988,5.31e-35,177;CL:0002393,3.39e-16,9;CL:0002397,3.39e-16,9;CL:0000094,3.26e-13,8;CL:0000134,2.22e-10,354;CL:0000219,7.08e-10,386;CL:0002320,7.84e-10,361;CL:0000081,3.37e-09,11;CL:0000775,1.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.86e-50;42!CL:0000049;9.86e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-24!102;UBERON:0003061!2.12e-24!102;UBERON:0002193!4.79e-22!112;UBERON:0002371!1.69e-17!80;UBERON:0001474!4.97e-17!86;UBERON:0007023!2.65e-16!115;UBERON:0004765!4.37e-13!101;UBERON:0001434!4.37e-13!101;UBERON:0002405!8.18e-12!115;UBERON:0000178!5.95e-08!15;UBERON:0000179!5.95e-08!15;UBERON:0000463!5.95e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.32e-13;15!UBERON:0000179;2.32e-13;15!UBERON:0000463;2.32e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.43e-51,98;UBERON:0003061,2.43e-51,98;UBERON:0002193,5.39e-45,108;UBERON:0002371,1.75e-41,76;UBERON:0001474,2.84e-39,82;UBERON:0004765,1.58e-34,90;UBERON:0002405,5.42e-33,93;UBERON:0001434,1.12e-29,100;UBERON:0003081,4.12e-17,203;UBERON:0000178,1.56e-13,15;UBERON:0000179,1.56e-13,15;UBERON:0000463,1.56e-13,15;UBERON:0002204,2.84e-13,167;UBERON:0002384,1.29e-09,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.753255837568817,0,0,0,0.786728553697808,2.68680578668049,3.8704030829019,0,0,0,0,0,0,5.53995408531877,3.60980005446255,2.82114131930607,0.671746422719773,0.971680998056939,1.80302897343931,4.07115068582781,4.1566353805769,2.42584061187816,1.62700325833979,3.70051099219643,0.619412741790207,3.74000110018796,2.56160706529101,1.41889337933151,2.41321976515633,5.16387746867061,2.70852973188684,2.07066573496865,2.18324920046277,3.14612878223118,2.14258724659632,1.60464513538047,2.55734850319616,2.30895910130701,1.59570926097305,2.13112375266347,2.90209238628584,5.10646702222026,4.35975574296902,2.26123798731069,4.17186334736161,4.56096573880745,2.42159801053347,2.20966581592539,1.58231193720442,2.5350634357433,2.12604299965044,1.25795187305026,1.90958672949042,3.90459921387916,4.98249318760948,1.14005097496499,3.18266683518544,1.46131323011707,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.27685187643779,1.17447437874188,1.14681968437569,1.32171328579026,1.12101712596307,0.263384084775077,1.37696839079683,1.57204305099666,1.85041349099558,0,0.651844533267181,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0,0,0.276350017785848,0,1.03800594213442,0.802622484269139,0,0,1.53288197440768,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.639933055772092,1.24930726552346,0.947109008176067,0,0.604820229674197,1.33720097891754,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.982343066232845,0,0.370784442784429,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0.949265659568129,0.183201743930407,10.5424333948851,7.75560528296651,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0,0,0,0.622422070799533,0.538842688278752,0.326923806226917,0.151357427644931,0.576175924479999,0.70296429550139,0,0,0,0,0.323745888736263,0,0,0.368502951935304,0.723280468230358,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0.831192346452549,0,0,0.150238058906597,0.226864366320042,0,0.640672166455702,0.211931901159562,0,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0.231860809950154,0.234817388471643,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,1.24396869324463,1.00883967391873,0.75745460055828,0.698476837213859,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.710783897485092,0,0.602878754119172,0,0,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,1.37921532141349,0.862510299438069,1.79680250791648,0.76228387266739,0,0.773288812777695,0.167516265334349,0,11.2351053592077,8.97484377612075,14.5045429702612,0.24538298343828,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0,1.86091223510599,1.50999940573032,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0.393373244878272,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0.330037999682352,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.537101224341368,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,5.58192370155386,3.82318603571188,2.27858874869665,1.19115887728894,2.46817363851717,2.59389324477087,0.540031437238115,2.37937552888281,0,0,0,0,0.28853842595289,0.426851060090485,0.478278818186467,0,0.191505370132367,1.2700414963433,0,0.561594356226918,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0.80719882876419,0.851692475380653,0.687010689511529,1.22896305723383,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,0.422250816255987,0.19924798825107,0.828851746593443,0.75579824356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| ||
|short_description=p3@PELI2 | |||
}} | }} |
Latest revision as of 17:04, 24 September 2015
Short description: | p3@PELI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PELI2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 90bp_to_ENST00000267460, NM_021255, uc001xch.2_5end |
EntrezGene: | PELI2 |
HGNC: | 8828 |
UniProt: | Q9HAT8Q9H716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-70 | 42 |
myeloid leukocyte | 1.26e-63 | 72 |
defensive cell | 5.51e-63 | 48 |
phagocyte | 5.51e-63 | 48 |
monopoietic cell | 1.49e-52 | 59 |
monocyte | 1.49e-52 | 59 |
monoblast | 1.49e-52 | 59 |
promonocyte | 1.49e-52 | 59 |
macrophage dendritic cell progenitor | 2.15e-50 | 61 |
myeloid lineage restricted progenitor cell | 7.15e-50 | 66 |
leukocyte | 7.18e-50 | 136 |
granulocyte monocyte progenitor cell | 6.39e-49 | 67 |
nongranular leukocyte | 1.20e-43 | 115 |
hematopoietic lineage restricted progenitor cell | 3.23e-39 | 120 |
myeloid cell | 1.15e-38 | 108 |
common myeloid progenitor | 1.15e-38 | 108 |
hematopoietic stem cell | 6.17e-38 | 168 |
hematopoietic oligopotent progenitor cell | 3.44e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-36 | 161 |
hematopoietic cell | 5.31e-35 | 177 |
intermediate monocyte | 3.39e-16 | 9 |
CD14-positive, CD16-positive monocyte | 3.39e-16 | 9 |
granulocyte | 3.26e-13 | 8 |
mesenchymal cell | 2.22e-10 | 354 |
motile cell | 7.08e-10 | 386 |
connective tissue cell | 7.84e-10 | 361 |
blood cell | 3.37e-09 | 11 |
neutrophil | 1.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.43e-51 | 98 |
blood island | 2.43e-51 | 98 |
hemolymphoid system | 5.39e-45 | 108 |
bone marrow | 1.75e-41 | 76 |
bone element | 2.84e-39 | 82 |
skeletal element | 1.58e-34 | 90 |
immune system | 5.42e-33 | 93 |
skeletal system | 1.12e-29 | 100 |
lateral plate mesoderm | 4.12e-17 | 203 |
blood | 1.56e-13 | 15 |
haemolymphatic fluid | 1.56e-13 | 15 |
organism substance | 1.56e-13 | 15 |
musculoskeletal system | 2.84e-13 | 167 |
connective tissue | 1.29e-09 | 371 |