FFCP PHASE1:Hg19::chr3:195515602..195515617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:195515602..195515617,- | |||
|coexpression_cluster_id=C1270 | |||
|description=CAGE_peak_at_chr3:195515602..195515617,- | |description=CAGE_peak_at_chr3:195515602..195515617,- | ||
|id=chr3:195515602..195515617,- | |id=chr3:195515602..195515617,- | ||
|ontology_enrichment_celltype=CL:0000039!7.79e-13!7;CL:0000586!7.79e-13!7;CL:0000349!1.19e-07!3;CL:0002577!1.19e-07!3 | |ontology_enrichment_celltype=CL:0000039!7.79e-13!7;CL:0000586!7.79e-13!7;CL:0000349!1.19e-07!3;CL:0002577!1.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.12e-29;7!CL:0000586;1.12e-29;7!CL:1000415;4.16e-13;2!CL:0002536;1.21e-12;2!CL:0002577;2.64e-08;3!CL:1001319;4.30e-07;1!CL:1000600;4.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.01e-30,7;CL:0000586,9.01e-30,7;CL:1000415,4.42e-13,2;CL:0002536,1.07e-12,2;CL:0002577,2.45e-08,3;CL:1001319,4.57e-07,1;CL:1000600,4.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.34e-14;10!UBERON:0005564;1.34e-14;10!UBERON:0004874;4.30e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.54e-11!106;DOID:1749!7.94e-09!14;DOID:0050687!9.49e-09!143 | |ontology_enrichment_disease=DOID:305!1.54e-11!106;DOID:1749!7.94e-09!14;DOID:0050687!9.49e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.54e-09;22!DOID:2994;4.54e-09;22!DOID:3111;3.20e-07;1!DOID:3603;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.45e-12,106;DOID:0050687,1.05e-10,143;DOID:3095,4.25e-09,22;DOID:2994,4.25e-09,22;DOID:3111,3.01e-07,1;DOID:3603,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.54e-11!169;UBERON:0000925!5.54e-11!169;UBERON:0006595!5.54e-11!169;UBERON:0001987!3.47e-09!4;UBERON:0004340!3.47e-09!4;UBERON:0000077!4.65e-09!130;UBERON:0004921!5.80e-09!129;UBERON:0004185!5.80e-09!129;UBERON:0000464!6.80e-09!104;UBERON:0001007!3.04e-08!155;UBERON:0001555!3.04e-08!155;UBERON:0007026!3.04e-08!155;UBERON:0000466!1.05e-07!126;UBERON:0003133!1.96e-07!48;UBERON:0005631!3.53e-07!14;UBERON:0000158!3.53e-07!14;UBERON:0005178!5.65e-07!34;UBERON:0002224!5.65e-07!34;UBERON:0000065!7.73e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!5.54e-11!169;UBERON:0000925!5.54e-11!169;UBERON:0006595!5.54e-11!169;UBERON:0001987!3.47e-09!4;UBERON:0004340!3.47e-09!4;UBERON:0000077!4.65e-09!130;UBERON:0004921!5.80e-09!129;UBERON:0004185!5.80e-09!129;UBERON:0000464!6.80e-09!104;UBERON:0001007!3.04e-08!155;UBERON:0001555!3.04e-08!155;UBERON:0007026!3.04e-08!155;UBERON:0000466!1.05e-07!126;UBERON:0003133!1.96e-07!48;UBERON:0005631!3.53e-07!14;UBERON:0000158!3.53e-07!14;UBERON:0005178!5.65e-07!34;UBERON:0002224!5.65e-07!34;UBERON:0000065!7.73e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;6.19e-14;7!UBERON:0001173;6.19e-14;7!UBERON:0003135;3.39e-13;11!UBERON:0000341;8.48e-13;2!UBERON:0006562;1.07e-12;2!UBERON:0003127;1.81e-12;2!UBERON:0000473;5.08e-12;8!UBERON:0002110;5.06e-09;3!UBERON:0004913;1.64e-07;1!UBERON:0003703;1.64e-07;1!UBERON:0001174;1.64e-07;1!UBERON:0004914;1.64e-07;1!UBERON:0000997;2.23e-07;1!UBERON:0005056;2.23e-07;1!UBERON:0004176;2.23e-07;1!UBERON:0000989;4.30e-07;1!UBERON:0004645;4.30e-07;1!UBERON:0008811;4.30e-07;1!UBERON:0001256;4.30e-07;1!UBERON:0001259;4.30e-07;1!UBERON:0002323;6.69e-07;45!UBERON:0002394;7.10e-07;4!UBERON:0003928;7.10e-07;4!UBERON:0002372;7.72e-07;1!UBERON:0001961;7.72e-07;1!UBERON:0001744;7.72e-07;1!UBERON:0001042;7.72e-07;1!UBERON:0001735;7.72e-07;1!UBERON:0000991;8.13e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.06e-13,11;UBERON:0000341,8.00e-13,2;UBERON:0003127,1.81e-12,2;UBERON:0000473,4.94e-12,8;UBERON:0002294,7.32e-11,9;UBERON:0001173,7.32e-11,9;UBERON:0004912,7.32e-11,9;UBERON:0003133,2.70e-10,48;UBERON:0004176,3.72e-09,22;UBERON:0002110,5.26e-09,3;UBERON:0006242,5.26e-09,3;UBERON:0005156,4.76e-08,59;UBERON:0000990,4.76e-08,59;UBERON:0004913,1.65e-07,1;UBERON:0003703,1.65e-07,1;UBERON:0001174,1.65e-07,1;UBERON:0004914,1.65e-07,1;UBERON:0000997,2.37e-07,1;UBERON:0005056,2.37e-07,1;UBERON:0000989,3.60e-07,1;UBERON:0008811,3.60e-07,1;UBERON:0006258,3.60e-07,1;UBERON:0005876,3.60e-07,1;UBERON:0004874,3.60e-07,1;UBERON:0004645,4.57e-07,1;UBERON:0001256,4.57e-07,1;UBERON:0001259,4.57e-07,1;UBERON:0002323,5.02e-07,46;UBERON:0002372,5.78e-07,1;UBERON:0001961,5.78e-07,1;UBERON:0001744,5.78e-07,1;UBERON:0001735,5.78e-07,1;UBERON:0000991,7.92e-07,21;UBERON:0009196,7.92e-07,21;UBERON:0009117,7.92e-07,21;UBERON:0005564,7.92e-07,21;UBERON:0004119,9.40e-07,160;UBERON:0000925,9.40e-07,160;UBERON:0006595,9.40e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,3.71350332621293,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0,0,2.78591888556713,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,1.61394733071642,6.73182333073291,0,0,0,0,0,0.941881538370149,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,4.97630965539252,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,5.29158946037639,0.174118413160805,0,0,0,0,0,0.387956065953678,0,1.12990370390266,0,0,0.0633107959558787,18.7729327425411,3.60714691131902,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.533937062838473,0.628817220398664,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,11.2370625524954,0,0,0,0,0,0.548257766857182,2.97726707033577,0,14.3093918956347,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,6.17858523506596,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.764859003745869,0,1.52983244612973,9.35260918429462,4.13527047906802,5.51556586443225,0,0,0,0,5.5440835294255,2.14257988317366,0,0.0620747142958579,0,0,0,1.08858373948481,0,1.75115337837928,4.44677673434593,1.33064142618405,2.11648498388534,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,3.71350332621293,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0.552567831062295,0,0,0,0,2.78591888556713,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,1.61394733071642,6.73182333073291,0,0,0,0,0,0.941881538370149,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,4.97630965539252,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,5.29158946037639,0.174118413160805,0,0,0,0,0,0.387956065953678,0,1.12990370390266,0,0,0.0633107959558787,18.7729327425411,3.60714691131902,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.533937062838473,0.628817220398664,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,11.2370625524954,0,0,0,0,0,0.548257766857182,2.97726707033577,0,14.3093918956347,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,6.17858523506596,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.764859003745869,0,1.52983244612973,9.35260918429462,4.13527047906802,5.51556586443225,0,0,0,0,5.5440835294255,2.14257988317366,0,0.0620747142958579,0,0,0,1.08858373948481,0,1.75115337837928,4.44677673434593,1.33064142618405,2.11648498388534,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr3:195515602..195515617,- | |short_description=p@chr3:195515602..195515617,- | ||
}} | }} |
Latest revision as of 19:45, 29 July 2015
Short description: | p@chr3:195515602..195515617, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:195515602..195515617, - |
Coexpression cluster: | C1270_papillotubular_gall_epidermoid_mucinous_trachea_throat_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.01e-30 | 7 |
germ cell | 9.01e-30 | 7 |
epithelial cell of gall bladder | 4.42e-13 | 2 |
amniotic epithelial cell | 1.07e-12 | 2 |
placental epithelial cell | 2.45e-08 | 3 |
bladder cell | 4.57e-07 | 1 |
lower urinary tract cell | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.45e-12 | 106 |
cell type cancer | 1.05e-10 | 143 |
germ cell and embryonal cancer | 4.25e-09 | 22 |
germ cell cancer | 4.25e-09 | 22 |
cystadenocarcinoma | 3.01e-07 | 1 |
mucinous cystadenocarcinoma | 3.01e-07 | 1 |