FFCP PHASE1:Hg19::chr16:68270072..68270086,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:68270072..68270086,-
|short_description=p2@ESRP2
|description=CAGE_peak_2_at_ESRP2_5end
|association_with_transcript=49bp_to_NM_024939,uc002evq.1,uc010cfa...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80004 | |EntrezGene=80004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26152 | |HGNC=26152 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6T0 | |UniProt=Q9H6T0 | ||
|association_with_transcript=49bp_to_NM_024939,uc002evq.1,uc010cfa.1_5end | |||
|cluster_id=chr16:68270072..68270086,- | |||
|description=CAGE_peak_2_at_ESRP2_5end | |||
|id=chr16:68270072..68270086,- | |||
|ontology_enrichment_celltype=CL:0000066!4.20e-46!254;CL:0000223!9.72e-24!59;CL:0002076!9.53e-21!43;CL:0002368!2.60e-12!13;CL:0002202!1.06e-08!9;CL:0002632!1.06e-08!9;CL:0002251!3.19e-08!21;CL:0000039!4.92e-08!7;CL:0000586!4.92e-08!7;CL:0000082!2.37e-07!19;CL:1000507!4.57e-07!12;CL:1000494!4.57e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.45e-12;3!CL:1000615;1.45e-12;3!CL:0002306;1.45e-12;3!CL:0002368;1.11e-10;13!CL:1000507;1.31e-09;10!CL:1000494;1.31e-09;10!CL:0000575;4.38e-09;2!CL:1000449;5.28e-09;15!CL:0002535;1.18e-08;2!CL:0002076;2.00e-08;42!CL:0002681;3.65e-08;12!CL:0002584;3.65e-08;12!CL:1000497;7.26e-08;17!CL:0002518;7.26e-08;17!CL:0002202;1.44e-07;9!CL:0002632;1.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.81e-19,253;CL:0000223,1.81e-15,58;CL:0000239,5.45e-13,3;CL:1000615,5.45e-13,3;CL:0002306,5.45e-13,3;CL:0002368,6.71e-11,13;CL:1000507,1.02e-09,10;CL:1000494,1.02e-09,10;CL:0002076,3.54e-09,42;CL:1000449,4.30e-09,15;CL:0000575,5.62e-09,2;CL:0002535,1.89e-08,2;CL:0002681,3.32e-08,12;CL:0002584,3.32e-08,12;CL:1000497,6.07e-08,17;CL:0002518,6.07e-08,17;CL:0002202,1.44e-07,9;CL:0002632,1.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;4.80e-12;58 | |||
|ontology_enrichment_disease=DOID:305!2.03e-38!106;DOID:0050687!1.16e-26!143;DOID:1749!1.26e-13!14;DOID:162!1.34e-11!235;DOID:14566!6.80e-11!239;DOID:299!1.55e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.56e-09;4!DOID:1612;1.56e-09;4!DOID:1749;2.61e-09;14!DOID:4362;1.85e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.33e-09,106;DOID:5093,1.48e-09,4;DOID:1612,1.48e-09,4;DOID:1749,2.36e-09,14;DOID:0050687,1.03e-08,143;DOID:4362,2.50e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.22e-26!169;UBERON:0000925!2.22e-26!169;UBERON:0006595!2.22e-26!169;UBERON:0001007!4.06e-22!155;UBERON:0001555!4.06e-22!155;UBERON:0007026!4.06e-22!155;UBERON:0004921!1.22e-20!129;UBERON:0004185!1.22e-20!129;UBERON:0000077!6.16e-19!130;UBERON:0001041!3.57e-18!98;UBERON:0000065!1.75e-17!53;UBERON:0001004!4.23e-17!72;UBERON:0000466!5.73e-17!126;UBERON:0005911!2.33e-15!82;UBERON:0005177!1.06e-14!107;UBERON:0008947!1.43e-14!38;UBERON:0003258!1.43e-14!38;UBERON:0000464!7.31e-14!104;UBERON:0000072!8.58e-14!46;UBERON:0009569!2.14e-13!113;UBERON:0001048!1.21e-10!168;UBERON:0005153!5.91e-10!37;UBERON:0003104!1.61e-09!238;UBERON:0009142!1.61e-09!238;UBERON:0005178!3.83e-09!34;UBERON:0002224!3.83e-09!34;UBERON:0006554!7.61e-09!44;UBERON:0005172!7.64e-09!55;UBERON:0005173!7.64e-09!55;UBERON:0005181!1.04e-08!35;UBERON:0001008!1.71e-08!45;UBERON:0000063!2.87e-08!97;UBERON:0002048!5.63e-08!22;UBERON:0000117!5.63e-08!22;UBERON:0000171!5.63e-08!22;UBERON:0000170!5.63e-08!22;UBERON:0005597!5.63e-08!22;UBERON:0000118!5.63e-08!22;UBERON:0000064!8.27e-08!219;UBERON:0000058!1.42e-07!26;UBERON:0003929!1.58e-07!54;UBERON:0002113!2.27e-07!27;UBERON:0003918!2.27e-07!27;UBERON:0005095!2.27e-07!27;UBERON:0007687!2.27e-07!27;UBERON:0004802!2.37e-07!19;UBERON:0000115!2.37e-07!19;UBERON:0001737!2.78e-07!9;UBERON:0002417!3.29e-07!61;UBERON:0000916!3.29e-07!61;UBERON:0004807!3.34e-07!28;UBERON:0005157!3.41e-07!51;UBERON:0000481!3.65e-07!347;UBERON:0000915!4.17e-07!52;UBERON:0009773!4.57e-07!12;UBERON:0001231!4.57e-07!12;UBERON:0004810!4.57e-07!12;UBERON:0001557!4.78e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.45e-12;3!UBERON:0007685;1.45e-12;3!UBERON:0004134;1.45e-12;3!UBERON:0004211;1.31e-09;10!UBERON:0009773;1.31e-09;10!UBERON:0001231;1.31e-09;10!UBERON:0004810;1.31e-09;10!UBERON:0006555;5.28e-09;15!UBERON:0004819;5.28e-09;15!UBERON:0001285;5.28e-09;15!UBERON:0007684;5.28e-09;15!UBERON:0006955;1.18e-08;2!UBERON:0004801;1.18e-08;2!UBERON:0001225;3.65e-08;12!UBERON:0008987;3.65e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.45e-13,3;UBERON:0007685,5.45e-13,3;UBERON:0004134,5.45e-13,3;UBERON:0005177,7.25e-11,101;UBERON:0009569,1.59e-10,112;UBERON:0004810,1.02e-09,10;UBERON:0004211,4.30e-09,15;UBERON:0009773,4.30e-09,15;UBERON:0001231,4.30e-09,15;UBERON:0001285,4.30e-09,15;UBERON:0007684,4.30e-09,15;UBERON:0004208,4.30e-09,15;UBERON:0006555,1.76e-08,16;UBERON:0004819,1.76e-08,16;UBERON:0006955,1.89e-08,2;UBERON:0004801,1.89e-08,2;UBERON:0001225,3.32e-08,12;UBERON:0008987,3.32e-08,12;UBERON:0005172,5.36e-08,54;UBERON:0005173,5.36e-08,54;UBERON:0002417,5.87e-07,60;UBERON:0000916,5.87e-07,60 | |||
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| ||
|short_description=p2@ESRP2 | |||
}} | }} |
Latest revision as of 13:08, 17 September 2015
Short description: | p2@ESRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ESRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_NM_024939, uc002evq.1, uc010cfa.1_5end |
EntrezGene: | ESRP2 |
HGNC: | 26152 |
UniProt: | Q9H6T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.81e-19 | 253 |
endodermal cell | 1.81e-15 | 58 |
brush border epithelial cell | 5.45e-13 | 3 |
kidney cortex tubule cell | 5.45e-13 | 3 |
epithelial cell of proximal tubule | 5.45e-13 | 3 |
respiratory epithelial cell | 6.71e-11 | 13 |
kidney tubule cell | 1.02e-09 | 10 |
nephron tubule epithelial cell | 1.02e-09 | 10 |
endo-epithelial cell | 3.54e-09 | 42 |
epithelial cell of nephron | 4.30e-09 | 15 |
corneal epithelial cell | 5.62e-09 | 2 |
epithelial cell of cervix | 1.89e-08 | 2 |
kidney cortical cell | 3.32e-08 | 12 |
renal cortical epithelial cell | 3.32e-08 | 12 |
kidney cell | 6.07e-08 | 17 |
kidney epithelial cell | 6.07e-08 | 17 |
epithelial cell of tracheobronchial tree | 1.44e-07 | 9 |
epithelial cell of lower respiratory tract | 1.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 5.45e-13 | 3 |
region of nephron tubule | 5.45e-13 | 3 |
proximal tubule | 5.45e-13 | 3 |
trunk region element | 7.25e-11 | 101 |
subdivision of trunk | 1.59e-10 | 112 |
nephron tubule epithelium | 1.02e-09 | 10 |
nephron epithelium | 4.30e-09 | 15 |
renal tubule | 4.30e-09 | 15 |
nephron tubule | 4.30e-09 | 15 |
nephron | 4.30e-09 | 15 |
uriniferous tubule | 4.30e-09 | 15 |
nephrogenic mesenchyme | 4.30e-09 | 15 |
excretory tube | 1.76e-08 | 16 |
kidney epithelium | 1.76e-08 | 16 |
uterine epithelium | 1.89e-08 | 2 |
cervix epithelium | 1.89e-08 | 2 |
cortex of kidney | 3.32e-08 | 12 |
renal parenchyma | 3.32e-08 | 12 |
abdomen element | 5.36e-08 | 54 |
abdominal segment element | 5.36e-08 | 54 |
abdominal segment of trunk | 5.87e-07 | 60 |
abdomen | 5.87e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.33e-09 | 106 |
thoracic cancer | 1.48e-09 | 4 |
breast cancer | 1.48e-09 | 4 |
squamous cell carcinoma | 2.36e-09 | 14 |
cell type cancer | 1.03e-08 | 143 |
cervical cancer | 2.50e-07 | 5 |