FFCP PHASE1:Hg19::chr17:46670740..46670767,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46670740..46670767,-
|short_description=p1@AB464575
|description=CAGE_peak_1_at_AB464575_5end
|association_with_transcript=276bp_to_AB464575_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=276bp_to_AB464575_5end | |||
|cluster_id=chr17:46670740..46670767,- | |||
|description=CAGE_peak_1_at_AB464575_5end | |||
|id=chr17:46670740..46670767,- | |||
|ontology_enrichment_celltype=CL:1000449!4.48e-12!16;CL:0002681!3.07e-10!13;CL:0002584!3.07e-10!13;CL:1000497!4.37e-10!18;CL:0002518!4.37e-10!18;CL:1000507!1.27e-09!12;CL:1000494!1.27e-09!12;CL:0000183!1.68e-07!59;CL:0002539!4.01e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.80e-14;15!CL:0002681;6.25e-12;12!CL:0002584;6.25e-12;12!CL:1000497;8.38e-12;17!CL:0002518;8.38e-12;17!CL:0002539;2.54e-11;10!CL:1000507;6.49e-09;10!CL:1000494;6.49e-09;10!CL:0002334;1.31e-07;12!CL:0000239;2.49e-07;3!CL:1000615;2.49e-07;3!CL:0002306;2.49e-07;3!CL:0002582;3.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.56e-13,15;CL:0002681,1.05e-11,12;CL:0002584,1.05e-11,12;CL:1000497,1.25e-11,17;CL:0002518,1.25e-11,17;CL:0002539,1.47e-11,10;CL:1000507,6.46e-09,10;CL:1000494,6.46e-09,10;CL:0002334,1.81e-07,12;CL:0000239,3.19e-07,3;CL:1000615,3.19e-07,3;CL:0002306,3.19e-07,3;CL:0002582,3.46e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@AB464575 | |||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p1@AB464575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464575_5end |
Coexpression cluster: | NA |
Association with transcript: | 276bp_to_AB464575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.56e-13 | 15 |
kidney cortical cell | 1.05e-11 | 12 |
renal cortical epithelial cell | 1.05e-11 | 12 |
kidney cell | 1.25e-11 | 17 |
kidney epithelial cell | 1.25e-11 | 17 |
aortic smooth muscle cell | 1.47e-11 | 10 |
kidney tubule cell | 6.46e-09 | 10 |
nephron tubule epithelial cell | 6.46e-09 | 10 |
preadipocyte | 1.81e-07 | 12 |
brush border epithelial cell | 3.19e-07 | 3 |
kidney cortex tubule cell | 3.19e-07 | 3 |
epithelial cell of proximal tubule | 3.19e-07 | 3 |
visceral preadipocyte | 3.46e-07 | 3 |