FFCP PHASE1:Hg19::chr12:52881094..52881129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52881094..52881129,- | |||
|coexpression_cluster_id=C594 | |coexpression_cluster_id=C594 | ||
|description=CAGE_peak_at_chr12:52881094..52881129,- | |description=CAGE_peak_at_chr12:52881094..52881129,- | ||
|id=chr12:52881094..52881129,- | |id=chr12:52881094..52881129,- | ||
|ontology_enrichment_celltype=CL:0002076!5.24e-30!43;CL:0000223!3.84e-20!59;CL:0000066!3.94e-18!254;CL:0002368!1.86e-17!13;CL:0002159!1.69e-16!13;CL:0002251!2.45e-14!21;CL:0002328!4.41e-10!3;CL:0002621!6.50e-10!3;CL:0000349!1.17e-09!3;CL:0002577!1.17e-09!3;CL:0000622!1.32e-09!5;CL:0002623!2.34e-09!3;CL:0002231!4.76e-09!3;CL:0002166!1.22e-08!3;CL:0000240!1.59e-08!6;CL:0000311!1.59e-08!6;CL:0000079!1.59e-08!6;CL:0000237!1.59e-08!6;CL:0000036!1.59e-08!6;CL:0000357!1.59e-08!6;CL:0000114!1.59e-08!6;CL:0002202!1.98e-08!9;CL:0002632!1.98e-08!9;CL:0002077!2.66e-08!33;CL:0000154!5.30e-08!6;CL:0000244!1.48e-07!4;CL:0000731!1.48e-07!4;CL:0000575!7.75e-07!2;CL:0002327!9.76e-07!4 | |ontology_enrichment_celltype=CL:0002076!5.24e-30!43;CL:0000223!3.84e-20!59;CL:0000066!3.94e-18!254;CL:0002368!1.86e-17!13;CL:0002159!1.69e-16!13;CL:0002251!2.45e-14!21;CL:0002328!4.41e-10!3;CL:0002621!6.50e-10!3;CL:0000349!1.17e-09!3;CL:0002577!1.17e-09!3;CL:0000622!1.32e-09!5;CL:0002623!2.34e-09!3;CL:0002231!4.76e-09!3;CL:0002166!1.22e-08!3;CL:0000240!1.59e-08!6;CL:0000311!1.59e-08!6;CL:0000079!1.59e-08!6;CL:0000237!1.59e-08!6;CL:0000036!1.59e-08!6;CL:0000357!1.59e-08!6;CL:0000114!1.59e-08!6;CL:0002202!1.98e-08!9;CL:0002632!1.98e-08!9;CL:0002077!2.66e-08!33;CL:0000154!5.30e-08!6;CL:0000244!1.48e-07!4;CL:0000731!1.48e-07!4;CL:0000575!7.75e-07!2;CL:0002327!9.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.34e-28;13!CL:0002076;1.46e-23;42!CL:0002328;2.00e-15;3!CL:0002621;2.00e-15;3!CL:0002577;9.85e-15;3!CL:0002202;1.58e-13;9!CL:0002632;1.58e-13;9!CL:0000240;1.99e-13;6!CL:0000311;1.99e-13;6!CL:0000079;1.99e-13;6!CL:0000237;1.99e-13;6!CL:0000349;1.23e-11;19!CL:0000244;1.96e-11;4!CL:0000731;1.96e-11;4!CL:0002251;3.47e-11;20!CL:0000312;2.15e-09;5!CL:0000622;3.58e-09;5!CL:0000362;9.42e-09;9!CL:0002159;1.89e-08;14!CL:0000154;1.03e-07;6!CL:0000307;1.64e-07;3!CL:0002623;1.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.67e-29,42;CL:0002368,1.61e-28,13;CL:0000223,2.74e-20,58;CL:0002328,1.53e-15,3;CL:0002621,2.90e-15,3;CL:0002577,7.60e-15,3;CL:0000066,1.04e-13,253;CL:0002202,1.65e-13,9;CL:0002632,1.65e-13,9;CL:0000240,2.10e-13,6;CL:0000311,2.10e-13,6;CL:0000079,2.10e-13,6;CL:0000237,2.10e-13,6;CL:0000036,2.10e-13,6;CL:0000357,2.10e-13,6;CL:0000114,2.10e-13,6;CL:0000349,1.13e-11,19;CL:0000244,1.23e-11,4;CL:0000731,1.23e-11,4;CL:0002251,4.38e-11,20;CL:0000312,2.24e-09,5;CL:0000622,3.25e-09,5;CL:0000362,8.43e-09,9;CL:0002159,1.77e-08,14;CL:0000154,9.46e-08,6;CL:0000068,2.06e-07,3;CL:0000069,2.06e-07,3;CL:0000307,2.06e-07,3;CL:0000377,2.06e-07,3;CL:0002623,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.99e-13;6!CL:0000114;1.99e-13;6!CL:0000223;2.50e-12;58!CL:0000377;1.64e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.11e-08!14 | |ontology_enrichment_disease=DOID:1749!1.11e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.07e-19!14;UBERON:0000158!4.07e-19!14;UBERON:0000161!1.14e-16!35;UBERON:0004119!1.34e-14!169;UBERON:0000925!1.34e-14!169;UBERON:0006595!1.34e-14!169;UBERON:0003124!1.96e-14!7;UBERON:0000166!2.74e-14!21;UBERON:0001004!9.66e-14!72;UBERON:0000165!2.86e-12!28;UBERON:0000930!2.86e-12!28;UBERON:0001987!8.71e-12!4;UBERON:0004340!8.71e-12!4;UBERON:0003102!3.74e-11!95;UBERON:0000478!2.99e-10!24;UBERON:0004815!4.41e-10!3;UBERON:0002031!4.41e-10!3;UBERON:0001949!6.50e-10!3;UBERON:0000365!1.00e-09!5;UBERON:0001444!1.53e-08!48;UBERON:0005910!4.24e-08!6;UBERON:0002185!1.22e-07!4;UBERON:0004923!1.22e-07!57;UBERON:0000065!1.43e-07!53;UBERON:0000077!2.84e-07!130;UBERON:0007196!3.45e-07!14;UBERON:0001558!3.45e-07!14;UBERON:0000305!4.51e-07!7;UBERON:0001911!9.76e-07!4;UBERON:0005333!9.76e-07!4;UBERON:0008425!9.76e-07!4;UBERON:0005311!9.76e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!4.07e-19!14;UBERON:0000158!4.07e-19!14;UBERON:0000161!1.14e-16!35;UBERON:0004119!1.34e-14!169;UBERON:0000925!1.34e-14!169;UBERON:0006595!1.34e-14!169;UBERON:0003124!1.96e-14!7;UBERON:0000166!2.74e-14!21;UBERON:0001004!9.66e-14!72;UBERON:0000165!2.86e-12!28;UBERON:0000930!2.86e-12!28;UBERON:0001987!8.71e-12!4;UBERON:0004340!8.71e-12!4;UBERON:0003102!3.74e-11!95;UBERON:0000478!2.99e-10!24;UBERON:0004815!4.41e-10!3;UBERON:0002031!4.41e-10!3;UBERON:0001949!6.50e-10!3;UBERON:0000365!1.00e-09!5;UBERON:0001444!1.53e-08!48;UBERON:0005910!4.24e-08!6;UBERON:0002185!1.22e-07!4;UBERON:0004923!1.22e-07!57;UBERON:0000065!1.43e-07!53;UBERON:0000077!2.84e-07!130;UBERON:0007196!3.45e-07!14;UBERON:0001558!3.45e-07!14;UBERON:0000305!4.51e-07!7;UBERON:0001911!9.76e-07!4;UBERON:0005333!9.76e-07!4;UBERON:0008425!9.76e-07!4;UBERON:0005311!9.76e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.00e-15;3!UBERON:0002031;2.00e-15;3!UBERON:0001949;2.00e-15;3!UBERON:0000486;4.40e-14;12!UBERON:0001987;3.53e-11;4!UBERON:0000165;5.16e-10;28!UBERON:0002185;1.91e-09;5!UBERON:0000365;3.06e-09;5!UBERON:0000478;5.13e-09;24!UBERON:0005911;1.94e-08;36!UBERON:0005631;3.96e-08;10!UBERON:0000158;3.96e-08;10!UBERON:0007196;5.30e-08;15!UBERON:0001558;5.30e-08;15!UBERON:0005910;9.02e-08;6!UBERON:0004807;1.73e-07;22!UBERON:0001723;1.75e-07;3!UBERON:0001033;1.75e-07;3!UBERON:0001043;2.78e-07;3!UBERON:0000305;5.98e-07;7!UBERON:0000485;7.32e-07;7!UBERON:0003929;7.32e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.54e-16,14;UBERON:0000158,3.54e-16,14;UBERON:0004815,1.53e-15,3;UBERON:0002031,1.53e-15,3;UBERON:0001949,2.90e-15,3;UBERON:0004119,2.14e-14,160;UBERON:0000925,2.14e-14,160;UBERON:0006595,2.14e-14,160;UBERON:0001004,4.16e-13,74;UBERON:0001987,2.91e-11,4;UBERON:0004340,2.91e-11,4;UBERON:0003124,3.11e-11,7;UBERON:0000166,5.83e-10,22;UBERON:0000165,1.41e-09,29;UBERON:0000930,1.41e-09,29;UBERON:0002185,1.64e-09,5;UBERON:0000365,2.12e-09,5;UBERON:0000478,4.79e-09,24;UBERON:0000065,1.14e-08,54;UBERON:0007196,5.43e-08,15;UBERON:0001558,5.43e-08,15;UBERON:0005910,6.65e-08,6;UBERON:0003102,8.69e-08,99;UBERON:0001723,1.64e-07,3;UBERON:0001033,1.64e-07,3;UBERON:0010056,1.64e-07,3;UBERON:0000161,1.78e-07,36;UBERON:0001043,3.42e-07,3;UBERON:0009143,3.42e-07,3;UBERON:0000305,6.97e-07,7;UBERON:0004923,8.56e-07,66 | |||
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| ||
|short_description=p@chr12:52881094..52881129,- | |short_description=p@chr12:52881094..52881129,- | ||
}} | }} |
Latest revision as of 09:32, 24 July 2015
Short description: | p@chr12:52881094..52881129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52881094..52881129, - |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.54e-16 | 14 |
membranous layer | 3.54e-16 | 14 |
lower respiratory tract epithelium | 1.53e-15 | 3 |
epithelium of bronchus | 1.53e-15 | 3 |
gingival epithelium | 2.90e-15 | 3 |
endoderm-derived structure | 2.14e-14 | 160 |
endoderm | 2.14e-14 | 160 |
presumptive endoderm | 2.14e-14 | 160 |
respiratory system | 4.16e-13 | 74 |
placenta | 2.91e-11 | 4 |
allantois | 2.91e-11 | 4 |
chorion | 3.11e-11 | 7 |
oral opening | 5.83e-10 | 22 |
mouth | 1.41e-09 | 29 |
stomodeum | 1.41e-09 | 29 |
bronchus | 1.64e-09 | 5 |
urothelium | 2.12e-09 | 5 |
extraembryonic structure | 4.79e-09 | 24 |
respiratory tract | 1.14e-08 | 54 |
tracheobronchial tree | 5.43e-08 | 15 |
lower respiratory tract | 5.43e-08 | 15 |
transitional epithelium | 6.65e-08 | 6 |
surface structure | 8.69e-08 | 99 |
tongue | 1.64e-07 | 3 |
gustatory system | 1.64e-07 | 3 |
future tongue | 1.64e-07 | 3 |
orifice | 1.78e-07 | 36 |
esophagus | 3.42e-07 | 3 |
esophageal region | 3.42e-07 | 3 |
amnion | 6.97e-07 | 7 |
organ component layer | 8.56e-07 | 66 |