FFCP PHASE1:Hg19::chr17:74128596..74128610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:74128596..74128610,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr17:74128596..74128610,- | |description=CAGE_peak_at_chr17:74128596..74128610,- | ||
|id=chr17:74128596..74128610,- | |id=chr17:74128596..74128610,- | ||
|ontology_enrichment_celltype=CL:0000039!9.58e-16!7;CL:0000586!9.58e-16!7;CL:0002322!1.09e-15!5;CL:0000066!1.28e-08!254;CL:0000223!1.93e-08!59 | |ontology_enrichment_celltype=CL:0000039!9.58e-16!7;CL:0000586!9.58e-16!7;CL:0002322!1.09e-15!5;CL:0000066!1.28e-08!254;CL:0000223!1.93e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0000159;1.82e-11;2!CL:0002178;4.84e-08;3!CL:0000239;7.26e-08;3!CL:1000615;7.26e-08;3!CL:0002306;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0000159,1.82e-11,2;CL:0002178,4.84e-08,3;CL:0000239,6.34e-08,3;CL:1000615,6.34e-08,3;CL:0002306,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.82e-21;1!UBERON:0005425;6.31e-21;1!UBERON:0009117;6.04e-09;10!UBERON:0005564;6.04e-09;10!UBERON:0003056;7.26e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.03e-17!106;DOID:0050687!1.97e-14!143;DOID:299!4.07e-11!25;DOID:162!4.97e-07!235;DOID:14566!9.95e-07!239 | |ontology_enrichment_disease=DOID:305!1.03e-17!106;DOID:0050687!1.97e-14!143;DOID:299!4.07e-11!25;DOID:162!4.97e-07!235;DOID:14566!9.95e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1!DOID:299;6.97e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1;DOID:299,7.14e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.58e-10!11;UBERON:0000473!8.15e-10!8;UBERON:0005156!1.03e-09!59;UBERON:0000990!1.03e-09!59;UBERON:0003133!1.52e-09!48;UBERON:0000466!1.57e-08!126;UBERON:0000991!2.08e-08!21;UBERON:0009196!2.08e-08!21;UBERON:0009117!2.08e-08!21;UBERON:0005564!2.08e-08!21;UBERON:0003101!5.42e-08!22;UBERON:0000079!5.42e-08!22;UBERON:0004176!5.77e-08!22;UBERON:0000341!7.86e-08!2;UBERON:0000464!1.90e-07!104 | |ontology_enrichment_uberon=UBERON:0003135!5.58e-10!11;UBERON:0000473!8.15e-10!8;UBERON:0005156!1.03e-09!59;UBERON:0000990!1.03e-09!59;UBERON:0003133!1.52e-09!48;UBERON:0000466!1.57e-08!126;UBERON:0000991!2.08e-08!21;UBERON:0009196!2.08e-08!21;UBERON:0009117!2.08e-08!21;UBERON:0005564!2.08e-08!21;UBERON:0003101!5.42e-08!22;UBERON:0000079!5.42e-08!22;UBERON:0004176!5.77e-08!22;UBERON:0000341!7.86e-08!2;UBERON:0000464!1.90e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0004909;1.82e-11;2!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0006853;7.26e-08;3!UBERON:0007685;7.26e-08;3!UBERON:0004134;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0000941,6.31e-21,1;UBERON:0001785,6.31e-21,1;UBERON:0002464,6.31e-21,1;UBERON:0004904,6.31e-21,1;UBERON:0001021,6.31e-21,1;UBERON:0003902,6.31e-21,1;UBERON:0005425,6.31e-21,1;UBERON:0004909,1.82e-11,2;UBERON:0003714,3.70e-11,2;UBERON:0005162,3.70e-11,2;UBERON:0000122,3.70e-11,2;UBERON:0006853,6.34e-08,3;UBERON:0007685,6.34e-08,3;UBERON:0004134,6.34e-08,3 | |||
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| ||
|short_description=p@chr17:74128596..74128610,- | |short_description=p@chr17:74128596..74128610,- | ||
}} | }} |
Latest revision as of 21:20, 25 July 2015
Short description: | p@chr17:74128596..74128610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74128596..74128610, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
seromucus secreting cell | 1.82e-11 | 2 |
epithelial cell of stomach | 4.84e-08 | 3 |
brush border epithelial cell | 6.34e-08 | 3 |
kidney cortex tubule cell | 6.34e-08 | 3 |
epithelial cell of proximal tubule | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
cranial nerve II | 6.31e-21 | 1 |
cranial nerve | 6.31e-21 | 1 |
nerve trunk | 6.31e-21 | 1 |
nerve connecting eye with brain | 6.31e-21 | 1 |
nerve | 6.31e-21 | 1 |
retinal neural layer | 6.31e-21 | 1 |
presumptive neural retina | 6.31e-21 | 1 |
epithelium of gonad | 1.82e-11 | 2 |
neural tissue | 3.70e-11 | 2 |
multi cell component structure | 3.70e-11 | 2 |
neuron projection bundle | 3.70e-11 | 2 |
renal cortex tubule | 6.34e-08 | 3 |
region of nephron tubule | 6.34e-08 | 3 |
proximal tubule | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |
adenocarcinoma | 7.14e-08 | 25 |