FFCP PHASE1:Hg19::chr19:48994556..48994562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48994556..48994562,- | |||
|description=CAGE_peak_at_chr19:48994556..48994562,- | |description=CAGE_peak_at_chr19:48994556..48994562,- | ||
|id=chr19:48994556..48994562,- | |id=chr19:48994556..48994562,- | ||
|ontology_enrichment_celltype=CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:1000449!5.86e-09!16;CL:0000066!1.09e-08!254;CL:1000497!9.87e-08!18;CL:0002518!9.87e-08!18;CL:0002076!1.52e-07!43;CL:0002681!5.45e-07!13;CL:0002584!5.45e-07!13;CL:0000239!6.23e-07!3;CL:1000615!6.23e-07!3;CL:0002306!6.23e-07!3;CL:0000068!8.67e-07!3;CL:0000069!8.67e-07!3;CL:0000307!8.67e-07!3;CL:0000377!8.67e-07!3 | |ontology_enrichment_celltype=CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:1000449!5.86e-09!16;CL:0000066!1.09e-08!254;CL:1000497!9.87e-08!18;CL:0002518!9.87e-08!18;CL:0002076!1.52e-07!43;CL:0002681!5.45e-07!13;CL:0002584!5.45e-07!13;CL:0000239!6.23e-07!3;CL:1000615!6.23e-07!3;CL:0002306!6.23e-07!3;CL:0000068!8.67e-07!3;CL:0000069!8.67e-07!3;CL:0000307!8.67e-07!3;CL:0000377!8.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;4.02e-21;3!CL:1000615;4.02e-21;3!CL:0002306;4.02e-21;3!CL:0000307;4.02e-21;3!CL:1000507;2.99e-14;10!CL:1000494;2.99e-14;10!CL:0002681;5.56e-12;12!CL:0002584;5.56e-12;12!CL:1000449;1.05e-09;15!CL:0000575;4.34e-09;2!CL:1000497;1.25e-08;17!CL:0002518;1.25e-08;17!CL:0002202;1.13e-07;9!CL:0002632;1.13e-07;9 | |ontology_enrichment_celltype_v019=CL:0000239;4.02e-21;3!CL:1000615;4.02e-21;3!CL:0002306;4.02e-21;3!CL:0000307;4.02e-21;3!CL:1000507;2.99e-14;10!CL:1000494;2.99e-14;10!CL:0002681;5.56e-12;12!CL:0002584;5.56e-12;12!CL:1000449;1.05e-09;15!CL:0000575;4.34e-09;2!CL:1000497;1.25e-08;17!CL:0002518;1.25e-08;17!CL:0002202;1.13e-07;9!CL:0002632;1.13e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-21,3;CL:1000615,2.17e-21,3;CL:0002306,2.17e-21,3;CL:0000068,5.47e-21,3;CL:0000069,5.47e-21,3;CL:0000307,5.47e-21,3;CL:0000377,5.47e-21,3;CL:1000507,2.67e-14,10;CL:1000494,2.67e-14,10;CL:0002681,5.06e-12,12;CL:0002584,5.06e-12,12;CL:1000449,9.76e-10,15;CL:0000575,4.34e-09,2;CL:1000497,1.17e-08,17;CL:0002518,1.17e-08,17;CL:0002202,1.25e-07,9;CL:0002632,1.25e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;4.02e-21;3!UBERON:0008425;1.78e-16;1 | |ontology_enrichment_development_v019=CL:0000377;4.02e-21;3!UBERON:0008425;1.78e-16;1 | ||
|ontology_enrichment_disease=DOID:5093!2.26e-09!4;DOID:1612!2.26e-09!4;DOID:299!1.83e-07!25 | |ontology_enrichment_disease=DOID:5093!2.26e-09!4;DOID:1612!2.26e-09!4;DOID:299!1.83e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.16e-35;4!DOID:1612;3.16e-35;4!DOID:6193;5.52e-17;1!DOID:3350;3.71e-09;2 | |ontology_enrichment_disease_v019=DOID:5093;3.16e-35;4!DOID:1612;3.16e-35;4!DOID:6193;5.52e-17;1!DOID:3350;3.71e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.66e-35,4;DOID:1612,2.66e-35,4;DOID:6193,5.53e-17,1;DOID:3350,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!5.86e-10!12;UBERON:0001231!5.86e-10!12;UBERON:0004810!5.86e-10!12;UBERON:0002113!1.63e-09!27;UBERON:0003918!1.63e-09!27;UBERON:0005095!1.63e-09!27;UBERON:0007687!1.63e-09!27;UBERON:0006554!2.43e-09!44;UBERON:0001008!4.97e-09!45;UBERON:0004211!5.86e-09!16;UBERON:0001285!5.86e-09!16;UBERON:0007684!5.86e-09!16;UBERON:0003220!5.86e-09!16;UBERON:0004208!5.86e-09!16;UBERON:0009569!8.34e-09!113;UBERON:0000489!1.18e-08!32;UBERON:0005177!1.98e-08!107;UBERON:0006555!2.62e-08!17;UBERON:0005103!2.62e-08!17;UBERON:0000083!2.62e-08!17;UBERON:0009201!2.62e-08!17;UBERON:0004819!2.62e-08!17;UBERON:0006553!2.62e-08!17;UBERON:0003074!2.62e-08!17;UBERON:0003060!2.62e-08!17;UBERON:0000080!9.87e-08!18;UBERON:0002120!9.87e-08!18;UBERON:0004875!9.87e-08!18;UBERON:0005721!9.87e-08!18;UBERON:0005754!9.87e-08!18;UBERON:0007297!9.87e-08!18;UBERON:0003103!1.80e-07!69;UBERON:0000464!1.83e-07!104;UBERON:0000020!2.78e-07!23;UBERON:0000058!4.32e-07!26;UBERON:0001225!5.45e-07!13;UBERON:0008987!5.45e-07!13;UBERON:0006853!6.23e-07!3;UBERON:0007685!6.23e-07!3;UBERON:0004134!6.23e-07!3;UBERON:0001032!7.03e-07!24;UBERON:0004456!7.03e-07!24;UBERON:0003064!7.51e-07!37;UBERON:0003126!8.28e-07!7;UBERON:0001005!8.28e-07!7;UBERON:0004876!9.32e-07!20 | |ontology_enrichment_uberon=UBERON:0009773!5.86e-10!12;UBERON:0001231!5.86e-10!12;UBERON:0004810!5.86e-10!12;UBERON:0002113!1.63e-09!27;UBERON:0003918!1.63e-09!27;UBERON:0005095!1.63e-09!27;UBERON:0007687!1.63e-09!27;UBERON:0006554!2.43e-09!44;UBERON:0001008!4.97e-09!45;UBERON:0004211!5.86e-09!16;UBERON:0001285!5.86e-09!16;UBERON:0007684!5.86e-09!16;UBERON:0003220!5.86e-09!16;UBERON:0004208!5.86e-09!16;UBERON:0009569!8.34e-09!113;UBERON:0000489!1.18e-08!32;UBERON:0005177!1.98e-08!107;UBERON:0006555!2.62e-08!17;UBERON:0005103!2.62e-08!17;UBERON:0000083!2.62e-08!17;UBERON:0009201!2.62e-08!17;UBERON:0004819!2.62e-08!17;UBERON:0006553!2.62e-08!17;UBERON:0003074!2.62e-08!17;UBERON:0003060!2.62e-08!17;UBERON:0000080!9.87e-08!18;UBERON:0002120!9.87e-08!18;UBERON:0004875!9.87e-08!18;UBERON:0005721!9.87e-08!18;UBERON:0005754!9.87e-08!18;UBERON:0007297!9.87e-08!18;UBERON:0003103!1.80e-07!69;UBERON:0000464!1.83e-07!104;UBERON:0000020!2.78e-07!23;UBERON:0000058!4.32e-07!26;UBERON:0001225!5.45e-07!13;UBERON:0008987!5.45e-07!13;UBERON:0006853!6.23e-07!3;UBERON:0007685!6.23e-07!3;UBERON:0004134!6.23e-07!3;UBERON:0001032!7.03e-07!24;UBERON:0004456!7.03e-07!24;UBERON:0003064!7.51e-07!37;UBERON:0003126!8.28e-07!7;UBERON:0001005!8.28e-07!7;UBERON:0004876!9.32e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.02e-21;3!UBERON:0007685;4.02e-21;3!UBERON:0004134;4.02e-21;3!UBERON:0000310;1.58e-14;10!UBERON:0004211;2.99e-14;10!UBERON:0009773;2.99e-14;10!UBERON:0001231;2.99e-14;10!UBERON:0004810;2.99e-14;10!UBERON:0001443;2.89e-13;11!UBERON:0001225;5.56e-12;12!UBERON:0008987;5.56e-12;12!UBERON:0001851;1.05e-09;15!UBERON:0006555;1.05e-09;15!UBERON:0000353;1.05e-09;15!UBERON:0004819;1.05e-09;15!UBERON:0001285;1.05e-09;15!UBERON:0007684;1.05e-09;15!UBERON:0003126;1.29e-09;7!UBERON:0001005;1.29e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0006853;4.02e-21;3!UBERON:0007685;4.02e-21;3!UBERON:0004134;4.02e-21;3!UBERON:0000310;1.58e-14;10!UBERON:0004211;2.99e-14;10!UBERON:0009773;2.99e-14;10!UBERON:0001231;2.99e-14;10!UBERON:0004810;2.99e-14;10!UBERON:0001443;2.89e-13;11!UBERON:0001225;5.56e-12;12!UBERON:0008987;5.56e-12;12!UBERON:0001851;1.05e-09;15!UBERON:0006555;1.05e-09;15!UBERON:0000353;1.05e-09;15!UBERON:0004819;1.05e-09;15!UBERON:0001285;1.05e-09;15!UBERON:0007684;1.05e-09;15!UBERON:0003126;1.29e-09;7!UBERON:0001005;1.29e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.17e-21,3;UBERON:0007685,2.17e-21,3;UBERON:0004134,2.17e-21,3;UBERON:0000310,1.47e-14,10;UBERON:0004810,2.67e-14,10;UBERON:0001443,2.71e-13,11;UBERON:0001225,5.06e-12,12;UBERON:0008987,5.06e-12,12;UBERON:0001851,9.76e-10,15;UBERON:0004211,9.76e-10,15;UBERON:0009773,9.76e-10,15;UBERON:0000353,9.76e-10,15;UBERON:0001231,9.76e-10,15;UBERON:0001285,9.76e-10,15;UBERON:0007684,9.76e-10,15;UBERON:0004208,9.76e-10,15;UBERON:0003126,1.47e-09,7;UBERON:0001005,1.47e-09,7;UBERON:0006555,3.65e-09,16;UBERON:0004819,3.65e-09,16;UBERON:0009569,4.56e-08,112;UBERON:0000915,2.29e-07,52 | |||
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| ||
|short_description=p@chr19:48994556..48994562,- | |short_description=p@chr19:48994556..48994562,- | ||
}} | }} |
Latest revision as of 15:44, 27 July 2015
Short description: | p@chr19:48994556..48994562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48994556..48994562, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.17e-21 | 3 |
kidney cortex tubule cell | 2.17e-21 | 3 |
epithelial cell of proximal tubule | 2.17e-21 | 3 |
duct epithelial cell | 5.47e-21 | 3 |
branched duct epithelial cell | 5.47e-21 | 3 |
tracheal epithelial cell | 5.47e-21 | 3 |
tracheoblast | 5.47e-21 | 3 |
kidney tubule cell | 2.67e-14 | 10 |
nephron tubule epithelial cell | 2.67e-14 | 10 |
kidney cortical cell | 5.06e-12 | 12 |
renal cortical epithelial cell | 5.06e-12 | 12 |
epithelial cell of nephron | 9.76e-10 | 15 |
corneal epithelial cell | 4.34e-09 | 2 |
kidney cell | 1.17e-08 | 17 |
kidney epithelial cell | 1.17e-08 | 17 |
epithelial cell of tracheobronchial tree | 1.25e-07 | 9 |
epithelial cell of lower respiratory tract | 1.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.17e-21 | 3 |
region of nephron tubule | 2.17e-21 | 3 |
proximal tubule | 2.17e-21 | 3 |
breast | 1.47e-14 | 10 |
nephron tubule epithelium | 2.67e-14 | 10 |
chest | 2.71e-13 | 11 |
cortex of kidney | 5.06e-12 | 12 |
renal parenchyma | 5.06e-12 | 12 |
cortex | 9.76e-10 | 15 |
nephron epithelium | 9.76e-10 | 15 |
renal tubule | 9.76e-10 | 15 |
parenchyma | 9.76e-10 | 15 |
nephron tubule | 9.76e-10 | 15 |
nephron | 9.76e-10 | 15 |
uriniferous tubule | 9.76e-10 | 15 |
nephrogenic mesenchyme | 9.76e-10 | 15 |
trachea | 1.47e-09 | 7 |
respiratory airway | 1.47e-09 | 7 |
excretory tube | 3.65e-09 | 16 |
kidney epithelium | 3.65e-09 | 16 |
subdivision of trunk | 4.56e-08 | 112 |
thoracic segment of trunk | 2.29e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.66e-35 | 4 |
breast cancer | 2.66e-35 | 4 |
epithelioid sarcoma | 5.53e-17 | 1 |
mesenchymal cell neoplasm | 3.71e-09 | 2 |