FFCP PHASE1:Hg19::chr20:55091919..55091934,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:55091919..55091934,+
|short_description=p1@FAM209A
|description=CAGE_peak_1_at_FAM209A_5end
|association_with_transcript=-308bp_to_ENST00000481560_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=200232 | |EntrezGene=200232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |HGNC=16100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_ENST00000481560_5end | |||
|cluster_id=chr20:55091919..55091934,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_1_at_FAM209A_5end | |||
|id=chr20:55091919..55091934,+ | |||
|ontology_enrichment_celltype=CL:0000148!4.13e-15!10;CL:0000541!4.13e-15!10;CL:0002567!1.39e-10!3;CL:0000147!1.90e-10!14;CL:0000710!5.84e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.22e-29;10!CL:0000147;2.21e-20;14!CL:0002567;5.28e-19;3!CL:0000710;5.25e-14;20!CL:0000075;3.83e-10;27!CL:0002566;1.05e-07;1!CL:0002077;4.43e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.40e-29,10;CL:0000541,5.40e-29,10;CL:0000147,1.80e-20,14;CL:0002567,3.67e-19,3;CL:0000710,4.57e-14,20;CL:0000075,3.46e-10,27;CL:0002077,6.65e-08,34;CL:0002566,1.06e-07,1 | |||
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|ontology_enrichment_disease=DOID:1909!1.22e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.19e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.00e-13,2 | |||
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| ||
|short_description=p1@FAM209A | |||
}} | }} |
Latest revision as of 03:20, 17 September 2015
Short description: | p1@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM209A_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -308bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.40e-29 | 10 |
melanoblast | 5.40e-29 | 10 |
pigment cell | 1.80e-20 | 14 |
light melanocyte | 3.67e-19 | 3 |
neurecto-epithelial cell | 4.57e-14 | 20 |
columnar/cuboidal epithelial cell | 3.46e-10 | 27 |
ecto-epithelial cell | 6.65e-08 | 34 |
dark melanocyte | 1.06e-07 | 1 |
Ontology term | p-value | n |
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