FFCP PHASE1:Hg19::chr17:37894206..37894222,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4567 | |||
|TSSclassifier=strong | |||
|UniProt=Q14451 | |||
|association_with_transcript=3bp_to_ENST00000309156_5end | |||
|cluster_id=chr17:37894206..37894222,+ | |||
|coexpression_cluster_id=C3629 | |||
|description=CAGE_peak_2_at_GRB7_5end | |||
|id=chr17:37894206..37894222,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.49e-37!254;CL:0000223!2.84e-19!59;CL:0002076!7.96e-17!43;CL:0002251!3.66e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.03e-14;42!CL:1000507;7.65e-10;10!CL:1000494;7.65e-10;10!CL:0002251;1.39e-09;20!CL:1000497;4.16e-08;17!CL:0002518;4.16e-08;17!CL:0000039;8.27e-08;7!CL:0000586;8.27e-08;7!CL:1000449;5.15e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.33e-39,253;CL:0000223,1.13e-20,58;CL:0002076,5.21e-19,42;CL:1000507,7.34e-10,10;CL:1000494,7.34e-10,10;CL:0002251,1.80e-09,20;CL:1000497,4.19e-08,17;CL:0002518,4.19e-08,17;CL:0000039,8.29e-08,7;CL:0000586,8.29e-08,7;CL:1000449,5.05e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;1.59e-11;58!UBERON:0006595;2.01e-10;86!UBERON:0001041;2.94e-09;30!UBERON:0008947;2.29e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.52e-32!106;DOID:0050687!3.18e-23!143;DOID:299!2.02e-11!25;DOID:1749!5.04e-09!14;DOID:162!2.01e-08!235;DOID:14566!6.45e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:299;7.37e-14;25!DOID:1749;1.58e-11;14!DOID:305;3.07e-11;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.59e-35,106;DOID:0050687,7.17e-25,143;DOID:299,4.93e-14,25;DOID:1749,1.65e-11,14;DOID:162,4.91e-09,235;DOID:14566,2.14e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.58e-30!169;UBERON:0000925!4.58e-30!169;UBERON:0006595!4.58e-30!169;UBERON:0001007!8.19e-27!155;UBERON:0001555!8.19e-27!155;UBERON:0007026!8.19e-27!155;UBERON:0004921!5.19e-25!129;UBERON:0004185!5.19e-25!129;UBERON:0000077!1.94e-22!130;UBERON:0000466!1.91e-19!126;UBERON:0001041!6.93e-19!98;UBERON:0000464!8.10e-17!104;UBERON:0005177!1.44e-16!107;UBERON:0000062!5.84e-15!511;UBERON:0000481!5.00e-14!347;UBERON:0001004!5.13e-14!72;UBERON:0001048!2.44e-12!168;UBERON:0005911!3.54e-12!82;UBERON:0000064!7.68e-12!219;UBERON:0009569!1.29e-11!113;UBERON:0000065!3.46e-11!53;UBERON:0003104!5.19e-11!238;UBERON:0009142!5.19e-11!238;UBERON:0001008!8.33e-11!45;UBERON:0002553!1.24e-10!70;UBERON:0006554!3.11e-10!44;UBERON:0008947!5.75e-10!38;UBERON:0003258!5.75e-10!38;UBERON:0000922!3.83e-09!612;UBERON:0005409!6.26e-09!35;UBERON:0000160!8.74e-09!27;UBERON:0005172!1.43e-08!55;UBERON:0005173!1.43e-08!55;UBERON:0000468!1.44e-08!659;UBERON:0003886!1.86e-08!63;UBERON:0000072!2.43e-08!46;UBERON:0000063!3.62e-08!97;UBERON:0005153!4.03e-08!37;UBERON:0000161!5.07e-08!35;UBERON:0000058!5.37e-08!26;UBERON:0002113!6.87e-08!27;UBERON:0003918!6.87e-08!27;UBERON:0005095!6.87e-08!27;UBERON:0007687!6.87e-08!27;UBERON:0005156!1.02e-07!59;UBERON:0000990!1.02e-07!59;UBERON:0002050!2.42e-07!605;UBERON:0005423!2.42e-07!605;UBERON:0000489!2.73e-07!32;UBERON:0003133!2.76e-07!48;UBERON:0004175!3.36e-07!25;UBERON:0002108!3.40e-07!14;UBERON:0000467!3.50e-07!625;UBERON:0003064!3.93e-07!37;UBERON:0005178!4.03e-07!34;UBERON:0002224!4.03e-07!34;UBERON:0000475!4.36e-07!365;UBERON:0000923!4.37e-07!604;UBERON:0005291!4.37e-07!604;UBERON:0006598!4.37e-07!604;UBERON:0002532!4.37e-07!604;UBERON:0000480!4.53e-07!626;UBERON:0002417!4.96e-07!61;UBERON:0000916!4.96e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.79e-11;30!UBERON:0001008;4.79e-11;30!UBERON:0004211;7.65e-10;10!UBERON:0009773;7.65e-10;10!UBERON:0001231;7.65e-10;10!UBERON:0004810;7.65e-10;10!UBERON:0004921;2.86e-09;33!UBERON:0002113;6.49e-08;24!UBERON:0011143;6.49e-08;24!UBERON:0005178;1.06e-07;34!UBERON:0002224;1.06e-07;34!UBERON:0000489;1.18e-07;29!UBERON:0000065;1.70e-07;44!UBERON:0002048;2.91e-07;22!UBERON:0000117;2.91e-07;22!UBERON:0000171;2.91e-07;22!UBERON:0000170;2.91e-07;22!UBERON:0005409;3.25e-07;22!UBERON:0006555;5.15e-07;15!UBERON:0004819;5.15e-07;15!UBERON:0001285;5.15e-07;15!UBERON:0007684;5.15e-07;15!UBERON:0005181;5.84e-07;35!UBERON:0005177;5.98e-07;99!UBERON:0003101;7.40e-07;22!UBERON:0000079;7.40e-07;22!UBERON:0005911;8.31e-07;36!UBERON:0004807;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.22e-25,160;UBERON:0000925,1.22e-25,160;UBERON:0006595,1.22e-25,160;UBERON:0001007,1.71e-22,145;UBERON:0001555,1.71e-22,145;UBERON:0007026,1.71e-22,145;UBERON:0004921,2.31e-21,118;UBERON:0005177,9.73e-20,101;UBERON:0001008,8.11e-15,48;UBERON:0006554,4.62e-14,47;UBERON:0001041,5.49e-14,87;UBERON:0009569,7.30e-13,112;UBERON:0005911,1.12e-12,82;UBERON:0001004,1.90e-11,74;UBERON:0005153,6.02e-10,37;UBERON:0000065,6.28e-10,54;UBERON:0004810,7.34e-10,10;UBERON:0008947,1.23e-09,38;UBERON:0003258,1.23e-09,38;UBERON:0002113,3.77e-09,26;UBERON:0003918,3.77e-09,26;UBERON:0011143,3.77e-09,26;UBERON:0005095,3.77e-09,26;UBERON:0007687,3.77e-09,26;UBERON:0000489,8.07e-09,31;UBERON:0005172,9.69e-09,54;UBERON:0005173,9.69e-09,54;UBERON:0005156,1.11e-08,59;UBERON:0000990,1.11e-08,59;UBERON:0005178,1.18e-08,34;UBERON:0002224,1.18e-08,34;UBERON:0000161,1.20e-08,36;UBERON:0005181,3.20e-08,35;UBERON:0002100,5.60e-08,199;UBERON:0005157,5.98e-08,47;UBERON:0003133,1.50e-07,48;UBERON:0006555,1.85e-07,16;UBERON:0004819,1.85e-07,16;UBERON:0000072,2.73e-07,47;UBERON:0002048,2.93e-07,22;UBERON:0000117,2.93e-07,22;UBERON:0000171,2.93e-07,22;UBERON:0000170,2.93e-07,22;UBERON:0005597,2.93e-07,22;UBERON:0000118,2.93e-07,22;UBERON:0001048,4.68e-07,160;UBERON:0004211,5.05e-07,15;UBERON:0009773,5.05e-07,15;UBERON:0001231,5.05e-07,15;UBERON:0001285,5.05e-07,15;UBERON:0007684,5.05e-07,15;UBERON:0004208,5.05e-07,15;UBERON:0002417,5.12e-07,60;UBERON:0000916,5.12e-07,60;UBERON:0004175,8.36e-07,25;UBERON:0003101,8.37e-07,22;UBERON:0000079,8.37e-07,22;UBERON:0000915,8.58e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,10.4670175195864,2.18441372130172,3.16520373874144,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.410623275218653,0.87879847716362,0,0,0,0,0,0,1.83884244895785,2.409647350226,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.567208902984407,0.221729397462564,0.43917392846563,2.22664428346111,6.55731518926576,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,3.05265836499774,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,5.60456474173561,2.18196896472668,2.00763216772303,5.3668430697022,2.12047629314376,3.71820617182459,4.66474747569167,6.30802127189071,1.09493207722749,0,0,0,0,0,0.709840800239063,1.68584690078102,0.964044119533928,1.54411561825352,1.30727666455444,0.474541238222193,2.42696354688296,1.56977172100277,1.53898862778556,0,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0,16.9724045189497,0.514703430895577,0.658501712451753,4.49607013030478,1.70899253099772,3.33318402570707,0,0,0,0,0,0,0,0,4.74122638775565,2.57545848628462,0,0,0,0.93733833986777,0.839910640994298,1.84307626415102,2.14940454486836,1.74380363108377,1.15014803749563,0,0,0.621984346622316,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.904318131178758,0,4.1988656296464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,2.12189300012382,0,1.5119514666484,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0.355123450626254,0,0,0,13.6571178038533,2.20557117333613,9.02393691571784,0,0,0,5.86559496779635,4.62092022626489,5.49044838423799,11.6911379722609,4.3276167846079,0,0,0.431831832204279,0,4.6060894382455,11.5388647986616,6.626783099171,13.2972161428596,7.38786690583188,0,0,1.28225062558195,4.92021968549559,4.22991913063594,13.7044545491471,0,0,2.87132768998086,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,2.64455864577565,0.768760269460425,2.55225424989168,3.74283789165535,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,2.4055528181378,3.35151137767894,3.26672954583968,13.8391387141865,3.01353760869861,1.68471475667626,2.66058092122005,2.29723400206959,0,0,0,0,0,0,0,0,0.213648142254946,3.84991942105343,5.14584453560167,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0.146508179271894,0,0,0.284136146806413,3.58116727106535,2.96964680832639,3.68592842519078,0,0,0,0,0,0.398495976502139,2.48655523978033,0.251932747854276,0,0,0,3.6846023970404,4.65455054156584,0,3.45251919729268,0,0,0,0.278304294485554,0,2.86470537193757,16.529939999281,10.1499940560871,2.61724931056649,3.81380475439149,8.50995654364571,0.344743373241465,0.291604613383254,0,0,0.120596438625408,1.52581736317083,3.98085335752409,1.18219047581419,0,0,15.1971881263678,3.46276163267087,0,3.22789466143284,8.97576444097721,9.12637924144868,4.78501739597879,5.95384357112105,15.4580085045404,0,0,0,0.676786981851542,0.588187602953219,0,0,0,2.95397290339238,66.7622185370914,10.8841865004134,0,4.97630965539252,8.66884132132724,9.77648231893801,0,0,0,0.134802265961354,0,0,0,26.8060527936963,0.242780379534093,16.177960516825,6.04953580243319,0,0.063186579628488,0,0,1.99396161812156,1.98595173525299,0.627865836814451,5.97362148864794,7.39984819677461,0,2.2562765983567,14.1109052276704,7.05179573301261,2.09672001890436,0.687944129886466,2.12863928835987,2.77739404927505,1.06750094169172,33.6551887214815,0.176512253383001,3.38971111170799,0,0,0.126621591911757,14.4708023223754,1.44285876452761,6.61704283691993,3.19695375331408,10.0863292007874,0,0,4.46569873763264,0,9.42776138467182,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.687481272035051,0,3.39454300848285,0,0.669514372325618,0.268733889946905,0,2.32991899054908,15.2839373676014,13.4337849161301,14.4917619286498,4.13395422361945,0.0846733320657845,0,0,1.44677833618517,1.65047323916681,4.15440338029185,0.674921674654501,14.702237136601,0.0607495566580247,7.71499781478312,11.1904104364861,22.3981091336442,0,0,10.7472510498889,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0.113312091520126,1.02586563574658,1.32506888912221,0.129282956361551,0,0.684347351537318,4.22889013390003,6.51403216662938,8.17462386518263,7.45630299624952,0,0,0,16.5968727020247,0,0,0,0,0.785270481251171,0,0.244052529803926,0.1251909307065,1.14681839138014,1.55300672151593,0.124192805882767,0.138348634936231,0,0,0,1.41159491818903,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p2@GRB7 | |||
}} |
Latest revision as of 22:44, 19 September 2015
Short description: | p2@GRB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRB7_5end |
Coexpression cluster: | C3629_clear_serous_papillotubular_testicular_signet_breast_esophagus |
Association with transcript: | 3bp_to_ENST00000309156_5end |
EntrezGene: | GRB7 |
HGNC: | 4567 |
UniProt: | Q14451 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.33e-39 | 253 |
endodermal cell | 1.13e-20 | 58 |
endo-epithelial cell | 5.21e-19 | 42 |
kidney tubule cell | 7.34e-10 | 10 |
nephron tubule epithelial cell | 7.34e-10 | 10 |
epithelial cell of alimentary canal | 1.80e-09 | 20 |
kidney cell | 4.19e-08 | 17 |
kidney epithelial cell | 4.19e-08 | 17 |
germ line cell | 8.29e-08 | 7 |
germ cell | 8.29e-08 | 7 |
epithelial cell of nephron | 5.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.59e-35 | 106 |
cell type cancer | 7.17e-25 | 143 |
adenocarcinoma | 4.93e-14 | 25 |
squamous cell carcinoma | 1.65e-11 | 14 |
cancer | 4.91e-09 | 235 |
disease of cellular proliferation | 2.14e-08 | 239 |