FFCP PHASE1:Hg19::chr1:17528221..17528228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:17528221..17528228,- | |||
|description=CAGE_peak_at_chr1:17528221..17528228,- | |||
|id=chr1:17528221..17528228,- | |||
|ontology_enrichment_celltype=CL:0002603!8.73e-12!3;CL:1000507!3.59e-11!12;CL:1000494!3.59e-11!12;CL:1000497!1.16e-09!18;CL:0002518!1.16e-09!18;CL:0000632!7.02e-09!2;CL:1000449!3.42e-08!16;CL:0002681!3.30e-07!13;CL:0002584!3.30e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.68e-30;10!CL:1000494;1.68e-30;10!CL:1000449;1.20e-20;15!CL:1000497;2.54e-18;17!CL:0002518;2.54e-18;17!CL:0000650;7.05e-18;2!CL:1000500;7.05e-18;2!CL:1000618;7.05e-18;2!CL:1001318;7.05e-18;2!CL:0002173;7.05e-18;2!CL:0000239;2.19e-12;3!CL:1000615;2.19e-12;3!CL:0002306;2.19e-12;3!CL:0000632;2.89e-12;3!CL:0002681;4.54e-12;12!CL:0002584;4.54e-12;12!CL:0000669;1.27e-09;4!CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.68e-30,10;CL:1000494,1.68e-30,10;CL:1000449,1.20e-20,15;CL:1000497,2.54e-18,17;CL:0002518,2.54e-18,17;CL:0000650,7.67e-18,2;CL:1000500,7.67e-18,2;CL:1000618,7.67e-18,2;CL:1001318,7.67e-18,2;CL:0002173,7.67e-18,2;CL:0000239,2.07e-12,3;CL:1000615,2.07e-12,3;CL:0002306,2.07e-12,3;CL:0000632,2.89e-12,3;CL:0002681,4.54e-12,12;CL:0002584,4.54e-12,12;CL:0000669,1.32e-09,4;CL:0000083,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!6.76e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.07e-17;2!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.27e-17,2;DOID:1793,1.70e-09,4;DOID:170,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.59e-11!12;UBERON:0001231!3.59e-11!12;UBERON:0004810!3.59e-11!12;UBERON:0000058!2.09e-10!26;UBERON:0000489!1.08e-09!32;UBERON:0003127!4.97e-09!2;UBERON:0000488!5.14e-09!4;UBERON:0004211!3.42e-08!16;UBERON:0001285!3.42e-08!16;UBERON:0007684!3.42e-08!16;UBERON:0003220!3.42e-08!16;UBERON:0004208!3.42e-08!16;UBERON:0000466!5.85e-08!126;UBERON:0006554!7.13e-08!44;UBERON:0001255!7.99e-08!2;UBERON:0001556!7.99e-08!2;UBERON:0002113!9.91e-08!27;UBERON:0003918!9.91e-08!27;UBERON:0005095!9.91e-08!27;UBERON:0007687!9.91e-08!27;UBERON:0006555!1.15e-07!17;UBERON:0005103!1.15e-07!17;UBERON:0000083!1.15e-07!17;UBERON:0009201!1.15e-07!17;UBERON:0004819!1.15e-07!17;UBERON:0006553!1.15e-07!17;UBERON:0003074!1.15e-07!17;UBERON:0003060!1.15e-07!17;UBERON:0001008!1.19e-07!45;UBERON:0001225!3.30e-07!13;UBERON:0008987!3.30e-07!13;UBERON:0000080!3.36e-07!18;UBERON:0002120!3.36e-07!18;UBERON:0004875!3.36e-07!18;UBERON:0005721!3.36e-07!18;UBERON:0005754!3.36e-07!18;UBERON:0007297!3.36e-07!18;UBERON:0002553!3.47e-07!70;UBERON:0003886!4.08e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.68e-30;10!UBERON:0009773;1.68e-30;10!UBERON:0001231;1.68e-30;10!UBERON:0004810;1.68e-30;10!UBERON:0006555;1.20e-20;15!UBERON:0004819;1.20e-20;15!UBERON:0001285;1.20e-20;15!UBERON:0007684;1.20e-20;15!UBERON:0003567;7.05e-18;2!UBERON:0003838;7.05e-18;2!UBERON:0003586;7.05e-18;2!UBERON:0005169;7.05e-18;2!UBERON:0002321;7.05e-18;2!UBERON:0005215;7.05e-18;2!UBERON:0002303;7.05e-18;2!UBERON:0002319;7.05e-18;2!UBERON:0003127;1.07e-17;2!UBERON:0002113;3.20e-13;24!UBERON:0011143;3.20e-13;24!UBERON:0006853;2.19e-12;3!UBERON:0007685;2.19e-12;3!UBERON:0004134;2.19e-12;3!UBERON:0001225;4.54e-12;12!UBERON:0008987;4.54e-12;12!UBERON:0000489;4.48e-11;29!UBERON:0006554;9.89e-11;30!UBERON:0001008;9.89e-11;30!UBERON:0001851;7.41e-10;15!UBERON:0000353;7.41e-10;15!UBERON:0005172;9.35e-10;52!UBERON:0005173;9.35e-10;52!UBERON:0003891;1.27e-09;4!UBERON:0005177;3.56e-07;99!UBERON:0002417;3.61e-07;58!UBERON:0000916;3.61e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.68e-30,10;UBERON:0004211,1.20e-20,15;UBERON:0009773,1.20e-20,15;UBERON:0001231,1.20e-20,15;UBERON:0001285,1.20e-20,15;UBERON:0007684,1.20e-20,15;UBERON:0004208,1.20e-20,15;UBERON:0006555,2.06e-19,16;UBERON:0004819,2.06e-19,16;UBERON:0003567,7.67e-18,2;UBERON:0003838,7.67e-18,2;UBERON:0003586,7.67e-18,2;UBERON:0005169,7.67e-18,2;UBERON:0002321,7.67e-18,2;UBERON:0005215,7.67e-18,2;UBERON:0002303,7.67e-18,2;UBERON:0002319,7.67e-18,2;UBERON:0003127,9.07e-18,2;UBERON:0006853,2.07e-12,3;UBERON:0007685,2.07e-12,3;UBERON:0004134,2.07e-12,3;UBERON:0002113,2.90e-12,26;UBERON:0003918,2.90e-12,26;UBERON:0011143,2.90e-12,26;UBERON:0005095,2.90e-12,26;UBERON:0007687,2.90e-12,26;UBERON:0005177,3.45e-12,101;UBERON:0001225,4.54e-12,12;UBERON:0008987,4.54e-12,12;UBERON:0000489,2.08e-10,31;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0001851,7.41e-10,15;UBERON:0000353,7.41e-10,15;UBERON:0003891,1.32e-09,4;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0003103,2.29e-08,68;UBERON:0009569,7.95e-08,112;UBERON:0006554,4.22e-07,47;UBERON:0001008,5.76e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,3.92174884588428,0,0,0,0,0,0,0,2.50844886927427,0.254876273045038,0,2.91037181138832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.539210106883961,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,1.5061663132462,0.665320713092027,0.162806537221949,0,0,1.43720323370539,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:17528221..17528228,- | |||
}} |
Latest revision as of 00:40, 28 July 2015
Short description: | p@chr1:17528221..17528228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:17528221..17528228, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.68e-30 | 10 |
nephron tubule epithelial cell | 1.68e-30 | 10 |
epithelial cell of nephron | 1.20e-20 | 15 |
kidney cell | 2.54e-18 | 17 |
kidney epithelial cell | 2.54e-18 | 17 |
mesangial cell | 7.67e-18 | 2 |
kidney interstitial cell | 7.67e-18 | 2 |
juxtaglomerular complex cell | 7.67e-18 | 2 |
renal interstitial pericyte | 7.67e-18 | 2 |
extraglomerular mesangial cell | 7.67e-18 | 2 |
brush border epithelial cell | 2.07e-12 | 3 |
kidney cortex tubule cell | 2.07e-12 | 3 |
epithelial cell of proximal tubule | 2.07e-12 | 3 |
hepatic stellate cell | 2.89e-12 | 3 |
kidney cortical cell | 4.54e-12 | 12 |
renal cortical epithelial cell | 4.54e-12 | 12 |
pericyte cell | 1.32e-09 | 4 |
epithelial cell of pancreas | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.27e-17 | 2 |
pancreatic cancer | 1.70e-09 | 4 |
endocrine gland cancer | 9.49e-07 | 6 |