FFCP PHASE1:Hg19::chr4:185772449..185772460,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-185bp_to_NR_037510_5end | |||
|cluster_id=chr4:185772449..185772460,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_MIR3945_5end | |||
|id=chr4:185772449..185772460,- | |||
|ontology_enrichment_celltype=CL:0002057!3.28e-90!42;CL:0000860!1.41e-83!45;CL:0000766!2.51e-75!76;CL:0002194!2.13e-59!63;CL:0000576!2.13e-59!63;CL:0000040!2.13e-59!63;CL:0000559!2.13e-59!63;CL:0002009!2.60e-57!65;CL:0000839!1.31e-52!70;CL:0000557!9.56e-52!71;CL:0000738!5.41e-51!140;CL:0000763!7.58e-48!112;CL:0000049!7.58e-48!112;CL:0000988!7.07e-42!182;CL:0002087!3.05e-41!119;CL:0000037!2.25e-39!172;CL:0000566!2.25e-39!172;CL:0002032!8.86e-36!165;CL:0000837!8.86e-36!165;CL:0002031!6.02e-33!124;CL:0000094!4.99e-27!8;CL:0000081!5.02e-24!11;CL:0000080!9.20e-19!6;CL:0000134!7.51e-13!358;CL:0002393!8.10e-13!9;CL:0002397!8.10e-13!9;CL:0002320!2.22e-12!365;CL:0000775!7.89e-12!3;CL:0000219!1.81e-11!390;CL:0000842!9.88e-11!3;CL:0000767!3.21e-10!3;CL:0000048!9.31e-09!430;CL:0000723!1.77e-08!436;CL:0000771!1.79e-08!2;CL:0000224!3.79e-08!4;CL:0000034!4.05e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.08e-65;33!CL:0002057;4.08e-65;33!CL:0000473;1.68e-45;39!CL:0000234;1.68e-45;39!CL:0000576;1.48e-39;48!CL:0000766;2.38e-29;69!CL:0000094;3.34e-21;8!CL:0000775;4.64e-21;3!CL:0000226;3.46e-19;3!CL:0000842;3.46e-19;3!CL:0000763;7.28e-18;100!CL:0002087;1.23e-15;104!CL:0000081;2.27e-15;11!CL:0000771;9.64e-15;2!CL:0002393;1.90e-10;6!CL:0002397;1.90e-10;6!CL:0000738;1.97e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-76,42;CL:0002057,1.01e-76,42;CL:0000473,1.35e-66,48;CL:0000234,1.35e-66,48;CL:0000766,4.46e-65,72;CL:0002194,2.08e-52,59;CL:0000576,2.08e-52,59;CL:0000040,2.08e-52,59;CL:0000559,2.08e-52,59;CL:0002009,1.41e-50,61;CL:0000839,1.78e-46,66;CL:0000557,9.94e-46,67;CL:0000763,5.46e-42,108;CL:0000049,5.46e-42,108;CL:0000738,1.79e-40,136;CL:0002087,1.31e-32,115;CL:0000037,7.30e-32,168;CL:0000988,5.36e-30,177;CL:0002032,1.23e-26,161;CL:0000837,1.23e-26,161;CL:0002031,9.37e-24,120;CL:0000094,2.95e-21,8;CL:0000775,3.80e-21,3;CL:0000226,4.76e-19,3;CL:0000842,4.76e-19,3;CL:0000081,2.08e-15,11;CL:0000771,9.65e-15,2;CL:0000134,1.89e-12,354;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441;CL:0002393,4.14e-07,9;CL:0002397,4.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-54;42!CL:0000049;2.34e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-52!102;UBERON:0003061!1.89e-52!102;UBERON:0002193!7.56e-47!112;UBERON:0002371!6.02e-45!80;UBERON:0001474!3.38e-41!86;UBERON:0004765!9.29e-34!101;UBERON:0001434!9.29e-34!101;UBERON:0002405!1.47e-28!115;UBERON:0003081!3.09e-19!216;UBERON:0002204!6.89e-17!167;UBERON:0000178!2.00e-12!15;UBERON:0000179!2.00e-12!15;UBERON:0000463!2.00e-12!15;UBERON:0002384!9.69e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.18e-40,76;UBERON:0002390,5.04e-39,98;UBERON:0003061,5.04e-39,98;UBERON:0001474,1.14e-36,82;UBERON:0002193,5.23e-35,108;UBERON:0004765,4.68e-33,90;UBERON:0002405,7.36e-32,93;UBERON:0001434,2.42e-29,100;UBERON:0003081,1.88e-16,203;UBERON:0002204,7.54e-16,167;UBERON:0002384,1.23e-11,371;UBERON:0000926,7.33e-09,315;UBERON:0004120,7.33e-09,315;UBERON:0006603,7.33e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,7.75593571944628,4.61252229181326,3.03815219002193,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,6.04154023876516,5.63553554364021,6.85798466676897,3.7922024881028,2.5819387343353,2.70852973188684,0,0,0,4.28517449319264,5.1348644332175,5.11469700639233,1.9791078011203,3.19141852194611,0.852449501065388,4.35313857942876,2.8369261234557,1.24564449799115,5.02497330513487,5.73631210262222,4.99534342821768,1.81619850790011,5.52416453981347,2.84816148696796,0.211255286311942,0.212604299965044,0.419317291016752,0.786300418025466,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,8.23907726341901,5.9832291840805,14.9189584836973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MIR3945 | |||
}} |
Latest revision as of 02:23, 17 September 2015
Short description: | p5@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MIR3945_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -185bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.18e-40 | 76 |
hematopoietic system | 5.04e-39 | 98 |
blood island | 5.04e-39 | 98 |
bone element | 1.14e-36 | 82 |
hemolymphoid system | 5.23e-35 | 108 |
skeletal element | 4.68e-33 | 90 |
immune system | 7.36e-32 | 93 |
skeletal system | 2.42e-29 | 100 |
lateral plate mesoderm | 1.88e-16 | 203 |
musculoskeletal system | 7.54e-16 | 167 |
connective tissue | 1.23e-11 | 371 |
mesoderm | 7.33e-09 | 315 |
mesoderm-derived structure | 7.33e-09 | 315 |
presumptive mesoderm | 7.33e-09 | 315 |