FFCP PHASE1:Hg19::chr5:169724873..169724889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |||
|TSSclassifier=strong | |||
|UniProt=Q13094 | |||
|association_with_transcript=-51bp_to_NM_005565,uc003man.1,uc011det.1_5end | |||
|cluster_id=chr5:169724873..169724889,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_LCP2_5end | |||
|id=chr5:169724873..169724889,- | |||
|ontology_enrichment_celltype=CL:0000037!9.61e-84!172;CL:0000566!9.61e-84!172;CL:0000988!5.06e-82!182;CL:0002032!9.44e-78!165;CL:0000837!9.44e-78!165;CL:0000738!4.40e-74!140;CL:0000763!1.73e-64!112;CL:0000049!1.73e-64!112;CL:0002031!5.73e-59!124;CL:0000766!5.28e-57!76;CL:0002087!2.43e-56!119;CL:0000557!1.03e-48!71;CL:0000839!3.53e-46!70;CL:0002009!5.30e-45!65;CL:0002057!1.28e-43!42;CL:0002194!1.59e-43!63;CL:0000576!1.59e-43!63;CL:0000040!1.59e-43!63;CL:0000559!1.59e-43!63;CL:0000860!2.05e-39!45;CL:0000134!2.55e-20!358;CL:0002320!1.44e-19!365;CL:0000219!7.37e-15!390;CL:0000838!1.20e-12!52;CL:0000542!3.39e-12!53;CL:0000051!3.39e-12!53;CL:0000048!9.72e-11!430;CL:0000084!3.07e-10!25;CL:0000827!3.07e-10!25;CL:0000034!3.77e-10!444;CL:0002393!4.01e-10!9;CL:0002397!4.01e-10!9;CL:0000723!4.54e-10!436;CL:0000094!8.47e-10!8;CL:0000081!5.84e-08!11;CL:0000791!9.54e-08!18;CL:0000789!9.54e-08!18;CL:0002420!9.54e-08!18;CL:0002419!9.54e-08!18;CL:0000790!9.54e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-55;33!CL:0002057;3.83e-55;33!CL:0000473;1.20e-48;39!CL:0000234;1.20e-48;39!CL:0000576;4.40e-44;48!CL:0000766;3.02e-41;69!CL:0000763;3.92e-24;100!CL:0002087;7.98e-20;104!CL:0000738;4.09e-18;136!CL:0000094;3.57e-16;8!CL:0000988;5.20e-15;177!CL:0000081;9.19e-14;11!CL:0002393;2.53e-12;6!CL:0002397;2.53e-12;6!CL:0000097;1.57e-09;5!CL:0000219;5.54e-08;193!CL:0000775;5.75e-07;3!CL:0000767;6.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.00e-92,72;CL:0000738,4.53e-89,136;CL:0000037,8.34e-87,168;CL:0000988,8.04e-85,177;CL:0002032,7.07e-81,161;CL:0000837,7.07e-81,161;CL:0000473,1.04e-78,48;CL:0000234,1.04e-78,48;CL:0000763,1.53e-78,108;CL:0000049,1.53e-78,108;CL:0000860,1.37e-76,42;CL:0002057,1.37e-76,42;CL:0000557,2.80e-75,67;CL:0000839,9.06e-74,66;CL:0002031,2.49e-70,120;CL:0002009,2.65e-68,61;CL:0002194,3.37e-68,59;CL:0000576,3.37e-68,59;CL:0000040,3.37e-68,59;CL:0000559,3.37e-68,59;CL:0002087,1.60e-67,115;CL:0000134,5.76e-29,354;CL:0002320,6.44e-28,361;CL:0000219,3.13e-24,386;CL:0000034,6.42e-20,441;CL:0000048,9.82e-20,427;CL:0000723,4.08e-19,433;CL:0002393,9.32e-17,9;CL:0002397,9.32e-17,9;CL:0000094,3.51e-16,8;CL:0000081,1.01e-13,11;CL:0000097,1.48e-09,5;CL:0002028,1.48e-09,5;CL:0000838,1.28e-07,52;CL:0000542,2.17e-07,53;CL:0000051,2.17e-07,53;CL:0000775,5.65e-07,3;CL:0000767,6.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-54;42!CL:0000049;1.68e-21;108 | |||
|ontology_enrichment_disease=DOID:1240!7.97e-13!39;DOID:8692!2.76e-11!31;DOID:2531!3.42e-11!51;DOID:0060083!3.42e-11!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-54!102;UBERON:0003061!1.89e-54!102;UBERON:0002193!6.46e-48!112;UBERON:0002371!4.64e-43!80;UBERON:0001474!3.19e-38!86;UBERON:0004765!1.08e-29!101;UBERON:0001434!1.08e-29!101;UBERON:0002405!5.20e-28!115;UBERON:0002384!7.70e-19!375;UBERON:0003081!1.24e-13!216;UBERON:0000178!3.26e-10!15;UBERON:0000179!3.26e-10!15;UBERON:0000463!3.26e-10!15;UBERON:0002204!4.93e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.87e-09;15!UBERON:0000179;1.87e-09;15!UBERON:0000463;1.87e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.29e-71,98;UBERON:0003061,2.29e-71,98;UBERON:0002371,2.16e-64,76;UBERON:0002193,6.05e-63,108;UBERON:0001474,1.88e-58,82;UBERON:0002405,1.33e-53,93;UBERON:0004765,9.17e-52,90;UBERON:0001434,6.59e-45,100;UBERON:0002384,1.73e-26,371;UBERON:0003081,2.19e-25,203;UBERON:0002204,2.49e-20,167;UBERON:0000926,5.65e-10,315;UBERON:0004120,5.65e-10,315;UBERON:0006603,5.65e-10,315;UBERON:0000178,2.50e-09,15;UBERON:0000179,2.50e-09,15;UBERON:0000463,2.50e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,2.05251473624864,1.8890587515283,25.9620422720277,26.8680578668049,23.3772346207275,0,0,0,0,0,0.293600439334847,95.2872102674829,108.895634976287,59.8950003175751,0.895661896959697,1.94336199611388,0.77272670290256,6.54292074508041,10.9584023669755,11.4014508758274,25.5671940596253,32.0710952657024,24.4668033007132,29.3446240168593,24.8475885333228,29.087314276296,51.7118521104928,34.8561729135266,44.6907405761328,27.6716239127629,18.5576182039335,24.2701363200691,52.0342617030534,48.7812121155662,52.4256443155214,16.4925650093358,20.7442203926497,14.9178662686443,62.6851955437741,31.7735725827038,46.7116686746681,23.8686231993906,23.4667313289091,26.062661364614,39.9563671738023,68.499640293687,46.8364333412509,8.87272202510155,10.2050063983221,7.75736988380991,5.27944566388527,3.30389164251314,6.10757229448904,5.98526761856622,4.37616689837998,4.56660384411585,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0.382273228125229,3.96513985737078,28.5859367120583,0,1.96709770113833,1.57204305099666,0.616804496998528,0,0.32592226663359,0.946895611469467,0,0.668462741311041,0,0,0.270803863765016,0,0.260118695119756,0.657751618414705,0.829050053357545,0.869409257205157,0.889719378972363,0.802622484269139,1.04535523804977,0.226618685395132,0,0,1.51811815211702,0.637130828648193,1.30216690771284,0.950452044448374,0.752875595388864,0.255973222308837,1.24930726552346,0.473554504088034,0,3.62892137804518,2.67440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.531831842075461,4.29283123749616,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.5640963796049,182.256724149713,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,4.91408956792399,3.12125440806329,0,0,0,0,0,0,4.92663237895944,4.84266387072743,15.9642648966394,18.3032340839541,6.312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,2.00902836572851,0,0,0,0,0,0,0,0.112085143993527,6.5020150866636,3.01878604803324,4.74869234235069,0.254094624222463,0,0,0,0,29.2112739339401,11.966458368161,36.4685651823711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,7.03011288817817,15.0999940573032,11.9534864739858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,1.13929437434833,0.714695326373367,0.822724546172388,3.24236655596359,2.70015718619057,0.79312517629427,0,0,0,0,0,0.569134746787313,0.159426272728822,2.59453182862662,0.191505370132367,0.423347165447766,0,0.842391534340376,0.228234679033192,1.72347885350326,0,0.50787533340481,0.802940375518498,0.201799707191048,1.70338495076131,2.06103206853459,0.921722292925374,0.447352215784832,2.16903884225481,1.56310476321632,6.68174817348582,2.46174797895425,1.08182271390393,0.66614393599564,0,0,0.439524537815682,0,0.557216921387392,0,0,1.18785872333055,0,0,0,0,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0,7.87742754950845,0,0,0,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0.533034776018635,3.06579894587209,0.31396051279005,0.664846727600626,0.676786981851542,0,0.167821586975843,0,2.70192184266644,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0.494255755786011,1.04421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,2.92466059016951,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64185041498678,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0.414239055347196,0,0.790446527591777,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.654261577023377,0,0,0,2.99981093782395,0.426766918776564,0.688859918643263,0,0,0,3.73246356019784,0,0,0,0,0.169732529954025,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,1.72850981333669,0,0.815636795721981,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929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| |||
|short_description=p4@LCP2 | |||
}} |
Latest revision as of 21:30, 16 September 2015
Short description: | p4@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -51bp_to_NM_005565, uc003man.1, uc011det.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | Q13094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.29e-71 | 98 |
blood island | 2.29e-71 | 98 |
bone marrow | 2.16e-64 | 76 |
hemolymphoid system | 6.05e-63 | 108 |
bone element | 1.88e-58 | 82 |
immune system | 1.33e-53 | 93 |
skeletal element | 9.17e-52 | 90 |
skeletal system | 6.59e-45 | 100 |
connective tissue | 1.73e-26 | 371 |
lateral plate mesoderm | 2.19e-25 | 203 |
musculoskeletal system | 2.49e-20 | 167 |
mesoderm | 5.65e-10 | 315 |
mesoderm-derived structure | 5.65e-10 | 315 |
presumptive mesoderm | 5.65e-10 | 315 |
blood | 2.50e-09 | 15 |
haemolymphatic fluid | 2.50e-09 | 15 |
organism substance | 2.50e-09 | 15 |