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{{f5samples
{{f5samples
|id=FF:10647-109A8
|DRA_sample_Accession=CAGE@SAMD00005182
|name=lens epithelial cell line:SRA 01/04
|accession_numbers=CAGE;DRX007918;DRR008790;DRZ000215;DRZ001600;DRZ011565;DRZ012950
|sample_id=10647
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005389,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0010317,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230
|rna_tube_id=109A8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000255,CL:0000306,CL:0002222,CL:0002224
|rna_box=109
|rna_position=A8
|sample_cell_lot=
|sample_cell_catalog=RCB1591
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=eye
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=3 months
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=1.92
|rna_od260/280=2.02
|sample_cell_type=lens epithelial cell
|sample_cell_line=SRA 01/04
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=21.17162
|rna_concentration=0.45046
|sample_note=
|profile_hcage=CNhs11750,LSID819,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000075,CL:0000144,CL:0000255,CL:0000306,CL:0000325,CL:0000548,CL:0002222,CL:0002224,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000019,UBERON:0000020,UBERON:0000033,UBERON:0000047,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000076,UBERON:0000119,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000483,UBERON:0000484,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000965,UBERON:0000970,UBERON:0001032,UBERON:0001048,UBERON:0001062,UBERON:0001444,UBERON:0001456,UBERON:0001801,UBERON:0001803,UBERON:0002050,UBERON:0002104,UBERON:0002532,UBERON:0002546,UBERON:0003073,UBERON:0004121,UBERON:0004456,UBERON:0005085,UBERON:0005389,UBERON:0005423,UBERON:0005426,UBERON:0007625
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101120,FF:0101874,FF:0103071
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:10412600..10412637,-!p1@TFAP2A!1.54!55.08!TFAP2A;;chr4:81118647..81118666,+!p1@PRDM8!1.52!41.91!PRDM8;;chr6:10412392..10412409,-!p4@TFAP2A!1.48!33.52!TFAP2A;;chr17:46703687..46703740,-!p1@HOXB9!1.44!26.34!HOXB9;;chr11:31832658..31832681,-!p1@PAX6!1.33!20.35!PAX6;;chr17:46688334..46688385,-!p1@HOXB7!1.29!26.34!HOXB7;;chr21:38071430..38071456,+!p1@SIM2!1.22!15.56!SIM2;;chr6:10415276..10415341,-!p2@TFAP2A!1.20!17.96!TFAP2A;;chr17:46682321..46682362,-!p1@HOXB6!1.15!13.17!HOXB6;;chr17:46806067..46806097,-!p1@HOXB13!1.15!13.17!HOXB13;;chr12:66218836..66218888,+!p1@HMGA2!1.13!117.34!HMGA2;;chr17:46687959..46688007,-!p2@HOXB7!1.12!16.76!HOXB7;;chr15:67418119..67418162,+!p5@SMAD3!1.11!13.17!SMAD3;;chr11:31832610..31832639,-!p5@PAX6!1.11!11.97!PAX6;;chr17:56065729..56065781,-!p2@VEZF1!1.10!50.29!VEZF1;;chr15:83953397..83953425,-!p1@BNC1!1.10!13.17!BNC1;;chr12:66218598..66218645,+!p2@HMGA2!1.06!49.09!HMGA2;;chr3:169381420..169381535,-!p1@MECOM!1.05!11.97!MECOM;;chr12:66218003..66218018,+!p9@HMGA2!1.03!11.97!HMGA2;;chr15:67418177..67418204,+!p9@SMAD3!1.02!9.58!SMAD3;;chr17:46703528..46703549,-!p5@HOXB9!1.02!9.58!HOXB9;;chr11:46299199..46299233,+!p1@CREB3L1!1.00!47.89!CREB3L1;;chr17:46655730..46655791,-!p1@HOXB4!1.00!22.75!HOXB4;;chr20:2673383..2673441,+!p1@EBF4!1.00!14.37!EBF4;;chr17:35294075..35294102,+!p1@ENST00000559335!0.97!8.38!LHX1;;chr10:28034739..28034756,-!p1@MKX!0.97!8.38!MKX;;chr2:42721205..42721307,+!p4@MTA3!0.97!8.38!MTA3;;chr6:10415484..10415508,-!p3@TFAP2A!0.97!8.38!TFAP2A;;chr8:23564065..23564087,-!p1@NKX2-6!0.97!8.38!NKX2-6;;chr1:25256756..25256774,-!p1@RUNX3!0.96!15.56!RUNX3;;chr5:150284532..150284549,-!p1@ZNF300!0.95!16.76!ZNF300;;chr12:80084737..80084763,-!p3@PAWR!0.94!29.93!PAWR;;chr5:176738887..176738934,-!p1@MXD3!0.93!52.68!MXD3;;chr9:114287433..114287513,+!p1@ZNF483!0.91!19.16!ZNF483;;chr17:41622731..41622764,-!p5@ETV4!0.91!7.18!ETV4;;chr17:46675558..46675577,-!p2@HOXB6!0.91!7.18!HOXB6;;chr4:109089095..109089144,-!p6@LEF1!0.91!7.18!LEF1;;chr11:46299539..46299620,+!p2@CREB3L1!0.90!11.97!CREB3L1;;chr7:6655225..6655279,+!p1@ENST00000457543!0.90!10.78!ZNF853;;chr15:67418047..67418093,+!p4@SMAD3!0.88!8.38!SMAD3;;chr12:124873852..124873881,-!p3@NCOR2!0.86!39.51!NCOR2;;chr15:96869114..96869160,+!p11@NR2F2!0.85!8.38!NR2F2;;chr12:77459306..77459365,-!p1@E2F7!0.84!79.02!E2F7;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.84!5.99!HOXC5;;chr14:69260437..69260442,-!p10@ZFP36L1!0.84!5.99!ZFP36L1;;chr6:10412576..10412599,-!p5@TFAP2A!0.84!5.99!TFAP2A;;chr7:35293685..35293718,-!p1@TBX20!0.84!5.99!TBX20;;chrY:2803415..2803468,+!p1@ZFY!0.84!5.99!ZFY;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.99!KDM5D;;chr12:80085061..80085119,-!p6@PAWR!0.83!9.58!PAWR;;chr6:85473156..85473210,-!p2@TBX18!0.83!7.18!TBX18;;chr12:27485785..27485816,+!p1@ARNTL2!0.82!41.91!ARNTL2;;chr17:41277372..41277418,-!p1@BRCA1!0.82!21.55!BRCA1;;chr20:42543506..42543549,+!p2@TOX2!0.82!14.37!TOX2;;chr12:80085255..80085284,-!p9@PAWR!0.82!8.38!PAWR;;chr12:27485823..27485868,+!p2@ARNTL2!0.81!23.95!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!0.81!22.75!FOSL1;;chr6:34204921..34204939,+!p3@HMGA1!0.80!173.61!HMGA1;;chr9:132427972..132428056,+!p1@PRRX2!0.80!7.18!PRRX2;;chr18:19749517..19749531,+!p3@GATA6!0.79!9.58!GATA6;;chr8:72756667..72756736,-!p2@MSC!0.79!8.38!MSC;;chr17:46675420..46675465,-!p3@HOXB6!0.79!5.99!HOXB6;;chr7:74072135..74072171,+!p2@GTF2I!0.78!16.76!GTF2I;;chr12:66218255..66218304,+!p3@HMGA2!0.78!14.37!HMGA2;;chr17:41623259..41623278,-!p7@ETV4!0.78!5.99!ETV4;;chr19:35759824..35759891,+!p1@USF2!0.77!167.62!USF2;;chr9:127533519..127533573,-!p2@NR6A1!0.77!5.99!NR6A1;;chr5:137804405..137804444,+!p3@EGR1!0.77!5.99!EGR1;;chr12:54447599..54447630,+!p3@HOXC4!0.76!5.99!HOXC4;;chr11:31832862..31832884,-!p2@PAX6!0.76!4.79!PAX6;;chr14:29235961..29236008,+!p1@FOXG1!0.76!4.79!FOXG1;;chr17:41277334..41277348,-!p6@BRCA1!0.76!4.79!BRCA1;;chr17:46687935..46687950,-!p3@HOXB7!0.76!4.79!HOXB7;;chr17:48072574..48072597,-!p1@DLX3!0.76!4.79!DLX3;;chr19:47523058..47523114,+!p1@NPAS1!0.76!4.79!NPAS1;;chr21:38071403..38071428,+!p2@SIM2!0.76!4.79!SIM2;;chr2:172949484..172949522,+!p1@DLX1!0.76!4.79!DLX1;;chr6:10412477..10412490,-!p10@TFAP2A!0.76!4.79!TFAP2A;;chr7:1577899..1577943,+!p3@MAFK!0.76!4.79!MAFK;;chr9:16705069..16705086,-!p3@BNC2!0.76!4.79!BNC2;;chr8:67525443..67525459,-!p2@MYBL1!0.75!7.18!MYBL1;;chr5:321810..321877,+!p1@AHRR!0.74!15.56!AHRR;;chr20:50179368..50179392,-!p2@NFATC2!0.74!5.99!NFATC2;;chr6:45389791..45389832,+!p3@RUNX2!0.73!11.97!RUNX2;;chr15:96874012..96874042,+!p2@NR2F2!0.72!43.10!NR2F2;;chr21:27107259..27107299,+!p1@GABPA!0.72!27.54!GABPA;;chr9:130954041..130954121,-!p2@CIZ1!0.72!20.35!CIZ1;;chr19:37019569..37019593,-!p2@ZNF260!0.72!7.18!ZNF260;;chr19:38146320..38146401,-!p1@ZFP30!0.71!25.14!ZFP30;;chrX:70503037..70503095,+!p3@NONO!0.71!7.18!NONO;;chr12:2986275..2986363,-!p1@FOXM1!0.70!45.50!FOXM1;;chr8:77593474..77593612,+!p1@ZFHX4!0.70!19.16!ZFHX4;;chr13:45011349..45011391,-!p4@TSC22D1!0.70!10.78!TSC22D1;;chr12:66218183..66218209,+!p4@HMGA2!0.70!8.38!HMGA2;;chr19:42788636..42788660,+!p1@CIC!0.70!7.18!CIC;;chr19:37329254..37329295,-!p1@ZNF790!0.69!10.78!ZNF790;;chr15:37390850..37390909,-!p3@MEIS2!0.69!8.38!MEIS2;;chr1:53019059..53019176,-!p2@ZCCHC11!0.68!38.31!ZCCHC11;;chr4:1873011..1873063,+!p2@WHSC1!0.68!14.37!WHSC1;;chr8:67525473..67525518,-!p1@MYBL1!0.68!9.58!MYBL1;;chr12:66218573..66218596,+!p7@HMGA2!0.68!5.99!HMGA2;;chr19:37096194..37096235,+!p1@ZNF382!0.67!13.17!ZNF382;;chr8:106330656..106330684,+!p1@ZFPM2!0.67!10.78!ZFPM2;;chr3:141087144..141087170,+!p11@ZBTB38!0.67!4.79!ZBTB38;;chr19:38720294..38720348,-!p1@DPF1!0.67!4.79!DPF1;;chr17:46125707..46125746,+!p2@NFE2L1!0.66!221.50!NFE2L1;;chr14:68283291..68283323,-!p1@ZFYVE26!0.66!68.25!ZFYVE26;;chr6:20402102..20402152,+!p1@E2F3!0.66!16.76!E2F3;;chr2:200323414..200323455,-!p1@SATB2!0.66!8.38!SATB2;;chr20:50721803..50721857,-!p2@ZFP64!0.66!5.99!ZFP64;;chr1:44513995..44514031,+!p1@KLF17!0.66!3.59!KLF17;;chr20:42602000..42602034,+!p5@TOX2!0.66!3.59!TOX2;;chr21:38071462..38071474,+!p3@SIM2!0.66!3.59!SIM2;;chr2:45169193..45169219,+!p3@SIX3!0.66!3.59!SIX3;;chr2:95963052..95963106,+!p1@KCNIP3!0.66!3.59!KCNIP3;;chr10:28034772..28034783,-!p4@MKX!0.66!3.59!MKX;;chr11:31832807..31832823,-!p4@PAX6!0.66!3.59!PAX6;;chr12:115122303..115122314,-!p6@TBX3!0.66!3.59!TBX3;;chr12:124873824..124873833,-!p19@NCOR2!0.66!3.59!NCOR2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.66!3.59!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.66!3.59!HMGA2;;chr12:69753583..69753598,+!p2@YEATS4!0.66!3.59!YEATS4;;chr9:126774018..126774055,+!p1@LHX2!0.66!3.59!LHX2;;chr6:10415263..10415274,-!p8@TFAP2A!0.66!3.59!TFAP2A;;chr6:41701557..41701578,-!p3@TFEB!0.66!3.59!TFEB;;chr7:27196267..27196311,-!p1@HOXA7!0.66!3.59!HOXA7;;chr8:77593448..77593471,+!p2@ZFHX4!0.66!3.59!ZFHX4;;chr15:67418099..67418118,+!p16@SMAD3!0.66!3.59!SMAD3;;chr15:96869165..96869183,+!p20@NR2F2!0.66!3.59!NR2F2;;chr17:46675586..46675600,-!p6@HOXB6!0.66!3.59!HOXB6;;chr17:46703942..46703964,-!p4@HOXB9!0.66!3.59!HOXB9;;chr17:46806419..46806438,-!p4@HOXB13!0.66!3.59!HOXB13;;chr19:40562072..40562143,-!p1@ZNF780B!0.65!37.12!ZNF780B;;chr11:76092097..76092183,-!p1@PRKRIR!0.65!32.33!PRKRIR;;chr7:64838786..64838809,+!p2@ZNF92!0.65!22.75!ZNF92;;chr7:99070527..99070542,+!p2@ZNF789!0.65!8.38!ZNF789;;chr6:31869828..31869880,-!p1@ZBTB12!0.65!7.18!ZBTB12;;chr15:80696703..80696754,+!p1@ARNT2!0.65!4.79!ARNT2;;chr19:18391615..18391637,-!p5@JUND!0.65!4.79!JUND;;chr19:36909528..36909581,-!p1@ZFP82!0.64!17.96!ZFP82;;chr3:185826764..185826803,-!p2@ETV5!0.64!14.37!ETV5;;chr1:151032922..151032951,+!p2@MLLT11!0.64!5.99!MLLT11;;chr5:72744445..72744466,-!p2@FOXD1!0.64!5.99!FOXD1;;chr6:21597600..21597664,+!p3@SOX4!0.64!5.99!SOX4;;chr12:80084279..80084293,-!p8@PAWR!0.64!5.99!PAWR;;chr9:4299979..4299996,-!p3@GLIS3!0.64!5.99!GLIS3;;chr14:55493763..55493824,-!p1@WDHD1!0.63!28.74!WDHD1;;chr12:3068544..3068597,+!p1@TEAD4!0.63!22.75!TEAD4;;chr3:114343768..114343822,-!p1@ZBTB20!0.63!16.76!ZBTB20;;chr19:38085633..38085706,-!p1@ZNF571!0.63!9.58!ZNF571;;chr8:23540441..23540466,-!p1@NKX3-1!0.63!7.18!NKX3-1;;chr3:157823517..157823562,-!p1@SHOX2!0.63!3.59!SHOX2;;chr19:1592714..1592762,-!p1@MBD3!0.62!28.74!MBD3;;chr12:80084167..80084197,-!p5@PAWR!0.62!8.38!PAWR;;chr12:125002827..125002855,-!p5@NCOR2!0.62!4.79!NCOR2;;chr15:96876340..96876348,+!p22@NR2F2!0.62!3.59!NR2F2;;chr1:67395922..67395976,+!p2@MIER1!0.61!35.92!MIER1;;chr17:41623692..41623715,-!p1@ETV4!0.61!15.56!ETV4;;chr15:96874244..96874259,+!p5@NR2F2!0.61!8.38!NR2F2;;chr19:37407172..37407217,-!p2@ZNF829!0.61!5.99!ZNF829;;chr6:85474299..85474324,-!p1@TBX18!0.61!5.99!TBX18;;chr18:53068911..53068935,-!p4@TCF4!0.61!3.59!TCF4;;chr19:40503013..40503044,+!p3@ZNF546!0.61!3.59!ZNF546;;chr19:10305581..10305646,-!p1@DNMT1!0.60!125.72!DNMT1;;chr17:45973586..45973618,+!p1@SP2!0.60!56.27!SP2;;chr5:43120995..43121052,+!p1@ZNF131!0.60!17.96!ZNF131;;chrX:84499081..84499115,+!p2@ZNF711!0.60!4.79!ZNF711;;chr10:8095593..8095625,+!p3@GATA3!0.60!3.59!GATA3;;chr7:99679311..99679322,-!p3@ZNF3!0.60!3.59!ZNF3;;chr3:37217544..37217586,-!p6@LRRFIP2!0.60!3.59!LRRFIP2;;chr13:114238997..114239077,+!p1@TFDP1!0.59!180.79!TFDP1;;chr17:70117153..70117174,+!p1@SOX9!0.59!35.92!SOX9;;chr7:19157043..19157088,-!p2@TWIST1!0.59!8.38!TWIST1;;chr20:32274150..32274166,-!p2@E2F1!0.59!5.99!E2F1;;chr17:46620898..46620927,-!p9@HOXB2!0.59!3.59!HOXB2;;chr20:42295745..42295765,+!p1@MYBL2!0.58!56.27!MYBL2;;chrX:128657413..128657456,-!p2@SMARCA1!0.58!29.93!SMARCA1;;chr20:32274179..32274213,-!p1@E2F1!0.58!22.75!E2F1;;chr19:37157713..37157760,-!p1@ZNF461!0.58!19.16!ZNF461;;chr21:36421535..36421610,-!p2@RUNX1!0.58!11.97!RUNX1;;chr9:37465273..37465338,-!p2@ZBTB5!0.58!8.38!ZBTB5;;chr11:120107344..120107351,+!p1@POU2F3!0.58!3.59!POU2F3;;chr15:37392576..37392589,-!p12@MEIS2!0.58!3.59!MEIS2;;chr17:41622834..41622883,-!p6@ETV4!0.58!3.59!ETV4;;chr6:34205372..34205412,+!p5@HMGA1!0.57!16.76!HMGA1;;chr20:39946361..39946379,-!p2@ZHX3!0.57!9.58!ZHX3;;chr22:22863052..22863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X1!0.33!2.39!RUNX1;;chr6:27356745..27356777,+!p1@ZNF391!0.33!2.39!ZNF391;;chr7:86781858..86781879,+!p3@DMTF1!0.33!2.39!DMTF1;;chr7:99613195..99613206,+!p4@ZKSCAN1!0.33!2.39!ZKSCAN1;;chr2:85980951..85981004,+!p1@ATOH8!0.33!2.39!ATOH8;;chr10:3824332..3824425,-!p4@KLF6!0.33!2.39!KLF6;;chr12:56575310..56575344,-!p3@SMARCC2!0.33!2.39!SMARCC2;;chr15:96875657..96875760,+!p14@NR2F2!0.33!2.39!NR2F2;;chr19:12476443..12476467,-!p1@ZNF442!0.33!2.39!ZNF442;;chr19:36980756..36980795,-!p3@ZNF566!0.33!2.39!ZNF566;;chr4:57774042..57774114,+!p1@REST!0.32!45.50!REST;;chr3:170075436..170075520,+!p1@SKIL!0.32!40.71!SKIL;;chr17:40440481..40440550,+!p1@STAT5A!0.32!13.17!STAT5A;;chr1:120190786..120190915,-!p1@ZNF697!0.32!13.17!ZNF697;;chr19:18392236..18392248,-!p2@JUND!0.32!11.97!JUND;;chr19:12721513..12721572,-!p1@ZNF490!0.32!7.18!ZNF490;;chr10:38146510..38146576,-!p1@ZNF248!0.32!4.79!ZNF248;;chr16:8962544..8962584,-!p2@CARHSP1!0.32!3.59!CARHSP1;;chr19:21203481..21203504,+!p2@ZNF430!0.32!3.59!ZNF430;;chr17:79885633..79885645,-!p4@MAFG!0.32!2.39!MAFG;;chr19:23941647..23941672,-!p2@ZNF681!0.32!2.39!ZNF681;;chr5:172484377..172484418,+!p2@C5orf41!0.32!2.39!CREBRF;;chr10:22292675..22292686,-!p3@DNAJC1!0.32!2.39!DNAJC1;;chr12:133707021..133707071,-!p2@ZNF891!0.32!2.39!ZNF891;;chr14:69259772..69259790,-!p1@ZFP36L1!0.31!191.57!ZFP36L1;;chr5:149380256..149380343,+!p1@HMGXB3!0.31!53.88!HMGXB3;;chr19:36706024..36706049,+!p1@ZNF146!0.31!32.33!ZNF146;;chr19:17356697..17356762,-!p1@NR2F6!0.31!25.14!NR2F6;;chr18:51750839..51750885,-!p2@MBD2!0.31!17.96!MBD2;;chr9:88969303..88969335,-!p1@ZCCHC6!0.31!16.76!ZCCHC6;;chr1:44679113..44679152,+!p1@DMAP1!0.31!14.37!DMAP1;;chr9:35732647..35732678,+!p2@CREB3!0.31!9.58!CREB3;;chr3:44519131..44519186,-!p1@ZNF445!0.31!9.58!ZNF445;;chr9:116638565..116638606,+!p1@ZNF618!0.31!7.18!ZNF618;;chr8:144373550..144373617,+!p1@ZNF696!0.31!5.99!ZNF696;;chr2:174828836..174828885,-!p5@SP3!0.31!5.99!SP3;;chr3:150126416..150126437,+!p3@TSC22D2!0.31!5.99!TSC22D2;;chr9:3525910..3525955,-!p4@RFX3!0.31!4.79!RFX3;;chr20:3388579..3388619,-!p3@C20orf194!0.31!3.59!C20orf194;;chr15:74833584..74833626,+!p1@ARID3B!0.31!3.59!ARID3B;;chr14:64971438..64971450,+!p2@ZBTB1!0.31!3.59!ZBTB1;;chr12:46123273..46123329,+!p3@ARID2!0.31!2.39!ARID2;;chr12:6798523..6798548,-!p6@ZNF384!0.31!2.39!ZNF384;;chr2:28616316..28616327,+!p5@FOSL2!0.31!2.39!FOSL2;;chr6:21597514..21597578,+!p4@SOX4!0.31!2.39!SOX4;;chr17:36861735..36861755,+!p4@MLLT6!0.31!2.39!MLLT6;;chr1:91487629..91487640,-!p7@ZNF644!0.31!2.39!ZNF644;;chr20:46130846..46130869,+!p5@NCOA3!0.31!1.20!NCOA3;;chr10:44144219..44144230,-!p5@ZNF32!0.31!1.20!ZNF32;;chr12:66218152..66218174,+!p10@HMGA2!0.31!1.20!HMGA2;;chr17:41623667..41623682,-!p8@ETV4!0.31!1.20!ETV4;;chr19:12721725..12721758,+!p1@ZNF791!0.30!31.13!ZNF791;;chr6:28109608..28109693,+!p1@ZNF192!0.30!29.93!ZNF192;;chr6:122720765..122720831,+!p1@HSF2!0.30!23.95!HSF2;;chr7:28725740..28725778,+!p1@CREB5!0.30!15.56!CREB5;;chr12:51157744..51157796,+!p2@ATF1!0.30!11.97!ATF1;;chr9:95640300..95640345,-!p1@ZNF484!0.30!9.58!ZNF484;;chr8:146228270..146228295,-!p1@ZNF252!0.30!9.58!ZNF252P;;chr19:35225121..35225175,+!p1@ZNF181!0.30!9.58!ZNF181;;chr8:144766617..144766664,+!p1@ZNF707!0.30!8.38!ZNF707;;chr6:35310363..35310382,+!p3@PPARD!0.30!5.99!PPARD;;chr1:154975258..154975330,+!p1@ZBTB7B!0.30!5.99!ZBTB7B;;chr1:205600919..205600982,-!p3@ELK4!0.30!5.99!ELK4;;chr3:44666551..44666577,+!p2@ZNF197!0.30!5.99!ZNF197;;chr4:76439649..76439662,+!p2@THAP6!0.30!3.59!THAP6;;chr12:133613937..133613994,+!p2@ZNF84!0.30!3.59!ZNF84;;chr15:67357992..67358009,+!p3@SMAD3!0.30!3.59!SMAD3;;chr17:42297282..42297300,-!p9@UBTF!0.30!2.39!UBTF;;chr19:20150029..20150078,-!p3@ZNF682!0.30!2.39!ZNF682;;chr19:37406934..37406949,-!p1@ZNF829!0.30!2.39!ZNF829;;chr3:150126038..150126052,+!p8@TSC22D2!0.30!2.39!TSC22D2;;chr3:21792585..21792625,-!p2@ZNF385D!0.30!1.20!ZNF385D;;chr3:71179785..71179810,-!p23@FOXP1!0.30!1.20!FOXP1;;chr15:37392534..37392562,-!p10@MEIS2!0.30!1.20!MEIS2;;chr15:76629097..76629120,+!p2@ISL2!0.30!1.20!ISL2;;chr15:96869511..96869525,+!p16@NR2F2!0.30!1.20!NR2F2;;chr19:20748603..20748606,-!p4@ZNF737!0.30!1.20!ZNF737;;chr19:39390667..39390678,+!p7@NFKBIB!0.30!1.20!NFKBIB;;chr19:39390697..39390713,+!p4@NFKBIB!0.30!1.20!NFKBIB;;chr19:52772811..52772817,+!p3@ZNF766!0.30!1.20!ZNF766;;chr5:92918860..92918871,+!p10@NR2F1!0.30!1.20!NR2F1;;chr7:14028488..14028516,-!p2@ETV1!0.30!1.20!ETV1;;chr7:1577111..1577132,+!p4@MAFK!0.30!1.20!MAFK;;chr10:38146482..38146507,-!p4@ZNF248!0.30!1.20!ZNF248;;chr11:46299186..46299195,+!p3@CREB3L1!0.30!1.20!CREB3L1;;chrX:118739835..118739862,-!p1@NKRF!0.30!1.20!NKRF;;chr12:95467267..95467350,-!p1@NR2C1!0.29!20.35!NR2C1;;chr6:41514078..41514158,+!p1@FOXP4!0.29!15.56!FOXP4;;chr1:41157266..41157314,+!p3@NFYC!0.29!14.37!NFYC;;chr8:135725249..135725292,-!p1@ZFAT!0.29!10.78!ZFAT;;chr8:28243661..28243709,-!p1@ZNF395!0.29!9.58!ZNF395;;chr19:50169013..50169062,-!p2@IRF3!0.29!9.58!IRF3;;chr3:40518599..40518664,+!p1@ZNF619!0.29!9.58!ZNF619;;chr9:3525968..3526016,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|fonse_cell_line=FF:0101120
|fonse_cell_line=FF:0101120
|fonse_cell_line_closure=FF:0101120
|fonse_cell_line_closure=FF:0101120
Line 66: Line 39:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lens%2520epithelial%2520cell%2520line%253aSRA%252001%252f04.CNhs11750.10647-109A8.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lens%2520epithelial%2520cell%2520line%253aSRA%252001%252f04.CNhs11750.10647-109A8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/lens%2520epithelial%2520cell%2520line%253aSRA%252001%252f04.CNhs11750.10647-109A8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/lens%2520epithelial%2520cell%2520line%253aSRA%252001%252f04.CNhs11750.10647-109A8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/lens%2520epithelial%2520cell%2520line%253aSRA%252001%252f04.CNhs11750.10647-109A8.hg38.nobarcode.ctss.bed.gz
|id=FF:10647-109A8
|is_a=CL:0002224;;EFO:0002091;;FF:0000210;;FF:0103071
|is_obsolete=
|library_id=CNhs11750
|library_id_phase_based=2:CNhs11750
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10647
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10647
|name=lens epithelial cell line:SRA 01/04
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11750,LSID819,release009,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.067056436129675,0.203723632538546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188566723987338,0,0,0,0,0,-0.0979578962680575,0,0,0.208933144556903,0,0,0,0,0,0,0,0,0,0,0.53078909704316,0,-0.145899716966013,0,0,0,0,0,0,0,0,0.306781461479299,0,0,0,0,0,0.0634402668484127,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0475048059928952,0,0,0,0.146347305356206,-0.040252535527986,0.170944867167883,0,0,0,-0.0980353512377064,0.242832363329551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.074571273245422,0,0,0,0,0.096868194675037,0,0,0,0,0,0
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|rna_box=109
|rna_catalog_number=
|rna_concentration=0.45046
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.92
|rna_od260/280=2.02
|rna_position=A8
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=109A8
|rna_weight_ug=21.17162
|sample_age=3 months
|sample_category=cell lines
|sample_cell_catalog=RCB1591
|sample_cell_line=SRA 01/04
|sample_cell_lot=
|sample_cell_type=lens epithelial cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.17605459675619e-243!GO:0043226;organelle;6.96232566365854e-200!GO:0043229;intracellular organelle;2.05653737679038e-199!GO:0043231;intracellular membrane-bound organelle;8.50622882901019e-195!GO:0043227;membrane-bound organelle;1.3489366162623e-194!GO:0005737;cytoplasm;7.43390194673152e-169!GO:0044422;organelle part;6.48496827749459e-144!GO:0044446;intracellular organelle part;1.24973927863442e-142!GO:0044444;cytoplasmic part;6.61222708793569e-109!GO:0032991;macromolecular complex;8.92307124461704e-102!GO:0005634;nucleus;4.23159053381901e-93!GO:0043170;macromolecule metabolic process;3.00275289832596e-89!GO:0044238;primary metabolic process;9.49690610407201e-87!GO:0044237;cellular metabolic process;3.57697212966513e-86!GO:0005515;protein binding;2.86724896639511e-84!GO:0044428;nuclear part;5.34088169491061e-82!GO:0030529;ribonucleoprotein complex;3.03715091454294e-79!GO:0043233;organelle lumen;7.31250185467219e-71!GO:0031974;membrane-enclosed lumen;7.31250185467219e-71!GO:0003723;RNA binding;4.26348026428885e-68!GO:0016043;cellular component organization and biogenesis;9.25420674875339e-60!GO:0043283;biopolymer metabolic process;7.87517707555071e-57!GO:0043234;protein complex;1.02868248715306e-53!GO:0019538;protein metabolic process;1.78077925622122e-51!GO:0005739;mitochondrion;4.1627942247514e-51!GO:0031981;nuclear lumen;2.10072484625561e-48!GO:0006396;RNA processing;5.18886453734715e-48!GO:0044260;cellular macromolecule metabolic process;7.30862596583528e-47!GO:0044267;cellular protein metabolic process;2.24142600977112e-46!GO:0033036;macromolecule localization;7.53387180078662e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.01467929093779e-46!GO:0015031;protein transport;6.8995651363269e-45!GO:0010467;gene expression;1.88295194929163e-44!GO:0031090;organelle membrane;3.95158993277404e-43!GO:0005840;ribosome;6.54805481284696e-43!GO:0006412;translation;7.2202265026861e-42!GO:0008104;protein localization;1.10910272344846e-41!GO:0045184;establishment of protein localization;6.13009401399306e-41!GO:0043228;non-membrane-bound organelle;6.76966350092498e-41!GO:0043232;intracellular non-membrane-bound organelle;6.76966350092498e-41!GO:0016071;mRNA metabolic process;2.12643023741899e-40!GO:0006996;organelle organization and biogenesis;1.90424341267249e-39!GO:0046907;intracellular transport;3.12177667939517e-39!GO:0006259;DNA metabolic process;1.4235665376248e-37!GO:0003735;structural constituent of ribosome;3.05073687535181e-37!GO:0008380;RNA splicing;9.19247975438001e-36!GO:0006397;mRNA processing;9.85922020762113e-35!GO:0031967;organelle envelope;2.1649591879327e-34!GO:0031975;envelope;4.68966914450101e-34!GO:0007049;cell cycle;2.24504737578467e-33!GO:0044429;mitochondrial part;2.31320617114885e-33!GO:0033279;ribosomal subunit;3.03335305940829e-33!GO:0000166;nucleotide binding;1.63894243022178e-32!GO:0006886;intracellular protein transport;6.57409466149349e-32!GO:0005829;cytosol;1.70145485339932e-31!GO:0009059;macromolecule biosynthetic process;7.3450965697613e-31!GO:0065003;macromolecular complex assembly;9.70227068959518e-31!GO:0005654;nucleoplasm;2.58756487697313e-30!GO:0044249;cellular biosynthetic process;1.7355908276556e-28!GO:0022607;cellular component assembly;3.05191511097359e-28!GO:0009058;biosynthetic process;5.01708555918353e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.56714661536242e-27!GO:0003676;nucleic acid binding;8.79933112306933e-27!GO:0005681;spliceosome;1.1271137751203e-26!GO:0051649;establishment of cellular localization;1.77399513504228e-25!GO:0051641;cellular localization;3.86333720453769e-25!GO:0000278;mitotic cell cycle;1.93320124081968e-24!GO:0044451;nucleoplasm part;3.30569201296944e-24!GO:0022402;cell cycle process;5.01078103898245e-24!GO:0016462;pyrophosphatase activity;9.92675514628185e-24!GO:0032553;ribonucleotide binding;9.92675514628185e-24!GO:0032555;purine ribonucleotide binding;9.92675514628185e-24!GO:0017111;nucleoside-triphosphatase activity;9.92675514628185e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.99862050318744e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.40671468870685e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;2.16953212732526e-23!GO:0017076;purine nucleotide binding;7.05583304925622e-23!GO:0016070;RNA metabolic process;1.06879733248443e-21!GO:0005524;ATP binding;3.54717191158225e-21!GO:0032559;adenyl ribonucleotide binding;1.03639301257324e-20!GO:0019866;organelle inner membrane;1.4025383170722e-20!GO:0006974;response to DNA damage stimulus;1.96726347024518e-20!GO:0005740;mitochondrial envelope;2.44552915091463e-20!GO:0006119;oxidative phosphorylation;8.09330243673928e-20!GO:0030554;adenyl nucleotide binding;9.91375018056392e-20!GO:0031966;mitochondrial membrane;2.24069923659217e-19!GO:0005730;nucleolus;2.47902995333644e-19!GO:0012505;endomembrane system;2.7466349489483e-19!GO:0006512;ubiquitin cycle;4.36066162592404e-19!GO:0006457;protein folding;4.77286033516206e-19!GO:0044445;cytosolic part;5.30640251848746e-19!GO:0008134;transcription factor binding;7.69479138181755e-19!GO:0022403;cell cycle phase;2.28499695635754e-18!GO:0051301;cell division;2.83582891505589e-18!GO:0005743;mitochondrial inner membrane;3.16416809032279e-18!GO:0005694;chromosome;5.17339133789796e-18!GO:0006281;DNA repair;7.60892792297098e-18!GO:0015935;small ribosomal subunit;8.87602282016016e-18!GO:0043412;biopolymer modification;1.18727248107042e-17!GO:0000087;M phase of mitotic cell cycle;1.25559701754293e-17!GO:0007067;mitosis;1.82086508593599e-17!GO:0016874;ligase activity;1.94736238837223e-17!GO:0022618;protein-RNA complex assembly;7.53122103960767e-17!GO:0006260;DNA replication;7.61003843575057e-17!GO:0015934;large ribosomal subunit;1.321436673526e-16!GO:0044455;mitochondrial membrane part;2.46499040782558e-16!GO:0051276;chromosome organization and biogenesis;2.70489018270185e-16!GO:0044427;chromosomal part;2.74648492385971e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.78262840801672e-16!GO:0019941;modification-dependent protein catabolic process;4.54673256009995e-16!GO:0043632;modification-dependent macromolecule catabolic process;4.54673256009995e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.33322759212324e-16!GO:0044257;cellular protein catabolic process;7.85880641462647e-16!GO:0016887;ATPase activity;8.27339960789936e-16!GO:0031980;mitochondrial lumen;8.54332878257478e-16!GO:0005759;mitochondrial matrix;8.54332878257478e-16!GO:0044265;cellular macromolecule catabolic process;1.01917377541386e-15!GO:0006464;protein modification process;1.11771906446936e-15!GO:0006605;protein targeting;1.14187263825443e-15!GO:0048770;pigment granule;1.34977193990286e-15!GO:0042470;melanosome;1.34977193990286e-15!GO:0031965;nuclear membrane;2.95191581633246e-15!GO:0051082;unfolded protein binding;3.2429662098122e-15!GO:0043687;post-translational protein modification;5.63417403969868e-15!GO:0042623;ATPase activity, coupled;6.20414867718676e-15!GO:0043285;biopolymer catabolic process;7.27418340305868e-15!GO:0044453;nuclear membrane part;8.27191650128589e-15!GO:0005635;nuclear envelope;8.42841860584871e-15!GO:0005783;endoplasmic reticulum;1.20438989454631e-14!GO:0005746;mitochondrial respiratory chain;1.80511447816885e-14!GO:0000279;M phase;1.94889648458215e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.00424095515986e-14!GO:0048193;Golgi vesicle transport;4.28211649251025e-14!GO:0050136;NADH dehydrogenase (quinone) activity;5.39684337815242e-14!GO:0003954;NADH dehydrogenase activity;5.39684337815242e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.39684337815242e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.67497621874786e-14!GO:0005794;Golgi apparatus;9.31885442576422e-14!GO:0008135;translation factor activity, nucleic acid binding;1.08279920790129e-13!GO:0009719;response to endogenous stimulus;1.27688694356084e-13!GO:0030163;protein catabolic process;1.27688694356084e-13!GO:0044432;endoplasmic reticulum part;2.71478481932817e-13!GO:0009057;macromolecule catabolic process;4.09274952616026e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;4.65831498881891e-13!GO:0000375;RNA splicing, via transesterification reactions;4.65831498881891e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.65831498881891e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;5.68290838295285e-13!GO:0051726;regulation of cell cycle;1.25346926699989e-12!GO:0016604;nuclear body;1.39471525855616e-12!GO:0005761;mitochondrial ribosome;1.52161422501621e-12!GO:0000313;organellar ribosome;1.52161422501621e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.57685064045008e-12!GO:0005643;nuclear pore;1.60503759745235e-12!GO:0006913;nucleocytoplasmic transport;1.73047753016431e-12!GO:0016192;vesicle-mediated transport;2.00238698044334e-12!GO:0006323;DNA packaging;2.03821504459608e-12!GO:0000074;regulation of progression through cell cycle;2.33020226606813e-12!GO:0015630;microtubule cytoskeleton;2.57460054635501e-12!GO:0004386;helicase activity;2.59556522352715e-12!GO:0003712;transcription cofactor activity;2.84174387919955e-12!GO:0051169;nuclear transport;4.21055083191668e-12!GO:0030964;NADH dehydrogenase complex (quinone);6.02831088454517e-12!GO:0045271;respiratory chain complex I;6.02831088454517e-12!GO:0005747;mitochondrial respiratory chain complex I;6.02831088454517e-12!GO:0042775;organelle ATP synthesis coupled electron transport;6.79774561901364e-12!GO:0042773;ATP synthesis coupled electron transport;6.79774561901364e-12!GO:0050794;regulation of cellular process;8.11346969095678e-12!GO:0012501;programmed cell death;8.67520659608713e-12!GO:0008639;small protein conjugating enzyme activity;1.03537210672628e-11!GO:0042254;ribosome biogenesis and assembly;1.11957167547e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.2223827376943e-11!GO:0006915;apoptosis;1.68437908885927e-11!GO:0006403;RNA localization;1.75202250022201e-11!GO:0050657;nucleic acid transport;1.8768488131304e-11!GO:0051236;establishment of RNA localization;1.8768488131304e-11!GO:0050658;RNA transport;1.8768488131304e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.01095823685877e-11!GO:0004842;ubiquitin-protein ligase activity;2.51495690268397e-11!GO:0048523;negative regulation of cellular process;2.80498914891446e-11!GO:0065002;intracellular protein transport across a membrane;4.77701327979473e-11!GO:0044248;cellular catabolic process;4.99763320402935e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.36810452168008e-11!GO:0003743;translation initiation factor activity;7.24837450502646e-11!GO:0006366;transcription from RNA polymerase II promoter;9.04745628584492e-11!GO:0008219;cell death;9.79031634957008e-11!GO:0016265;death;9.79031634957008e-11!GO:0051186;cofactor metabolic process;1.23478438170019e-10!GO:0016568;chromatin modification;1.42739957681298e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.67959711765073e-10!GO:0019787;small conjugating protein ligase activity;1.70557866419577e-10!GO:0008026;ATP-dependent helicase activity;1.78053219050165e-10!GO:0046930;pore complex;2.473685929478e-10!GO:0016607;nuclear speck;2.99074634891476e-10!GO:0005789;endoplasmic reticulum membrane;6.32525010406369e-10!GO:0006413;translational initiation;6.90670120215585e-10!GO:0006461;protein complex assembly;9.48948703721992e-10!GO:0048519;negative regulation of biological process;9.92266810524797e-10!GO:0006446;regulation of translational initiation;1.12657737143544e-09!GO:0051028;mRNA transport;1.41079276663693e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.41079276663693e-09!GO:0009259;ribonucleotide metabolic process;1.98569820697042e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.13484374947117e-09!GO:0006793;phosphorus metabolic process;3.23895498699133e-09!GO:0006796;phosphate metabolic process;3.23895498699133e-09!GO:0016881;acid-amino acid ligase activity;3.81223414506946e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.9388221296409e-09!GO:0017038;protein import;4.68618414866892e-09!GO:0005793;ER-Golgi intermediate compartment;4.75920756474609e-09!GO:0008565;protein transporter activity;6.05882693898944e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.17685002971599e-09!GO:0000785;chromatin;8.73813527451603e-09!GO:0006163;purine nucleotide metabolic process;1.13350266719045e-08!GO:0009150;purine ribonucleotide metabolic process;2.22012530621897e-08!GO:0005815;microtubule organizing center;2.26335766063546e-08!GO:0005813;centrosome;2.47870089178102e-08!GO:0051329;interphase of mitotic cell cycle;2.66462399019557e-08!GO:0016310;phosphorylation;2.76473316698519e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.89802812880913e-08!GO:0006364;rRNA processing;3.18656751836542e-08!GO:0009260;ribonucleotide biosynthetic process;4.02907589562012e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.44552274554923e-08!GO:0016072;rRNA metabolic process;5.02311307245538e-08!GO:0043067;regulation of programmed cell death;5.14252807618274e-08!GO:0006164;purine nucleotide biosynthetic process;5.27764525961335e-08!GO:0005819;spindle;5.57384275713994e-08!GO:0031324;negative regulation of cellular metabolic process;5.58916878091058e-08!GO:0006399;tRNA metabolic process;5.69538621539127e-08!GO:0009141;nucleoside triphosphate metabolic process;5.75268718313199e-08!GO:0042981;regulation of apoptosis;5.75268718313199e-08!GO:0009055;electron carrier activity;7.47686934394613e-08!GO:0005667;transcription factor complex;7.47686934394613e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.70059420535003e-08!GO:0009144;purine nucleoside triphosphate metabolic process;8.70059420535003e-08!GO:0006333;chromatin assembly or disassembly;8.80189335681439e-08!GO:0051325;interphase;9.14746352613101e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.20945178815466e-08!GO:0050789;regulation of biological process;9.33772460723508e-08!GO:0009152;purine ribonucleotide biosynthetic process;9.89173500859701e-08!GO:0016563;transcription activator activity;1.00429003835116e-07!GO:0000151;ubiquitin ligase complex;1.05028301405909e-07!GO:0006261;DNA-dependent DNA replication;1.24454424603763e-07!GO:0000245;spliceosome assembly;1.24629703320065e-07!GO:0005657;replication fork;1.32006457177236e-07!GO:0065004;protein-DNA complex assembly;1.39374351310331e-07!GO:0015986;ATP synthesis coupled proton transport;1.39628744941859e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.39628744941859e-07!GO:0006732;coenzyme metabolic process;1.40709903341056e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.64743583647393e-07!GO:0007010;cytoskeleton organization and biogenesis;1.64743583647393e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.85324630077714e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.85324630077714e-07!GO:0019829;cation-transporting ATPase activity;1.90030503679762e-07!GO:0032446;protein modification by small protein conjugation;2.19697332051431e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.98339465047197e-07!GO:0016567;protein ubiquitination;3.23079207699059e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.47610420664556e-07!GO:0046034;ATP metabolic process;3.68437828713437e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.7584207907069e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.7584207907069e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.02669896247302e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.02669896247302e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.02669896247302e-07!GO:0016564;transcription repressor activity;4.18022832380411e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.445732759667e-07!GO:0000775;chromosome, pericentric region;5.25952877417477e-07!GO:0005768;endosome;5.2787242348841e-07!GO:0016740;transferase activity;5.98908432086439e-07!GO:0019222;regulation of metabolic process;6.50918308257963e-07!GO:0030120;vesicle coat;7.05742487886259e-07!GO:0030662;coated vesicle membrane;7.05742487886259e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.50846402363061e-07!GO:0043566;structure-specific DNA binding;7.77265009737615e-07!GO:0003697;single-stranded DNA binding;8.22672002196853e-07!GO:0043069;negative regulation of programmed cell death;8.50644874474046e-07!GO:0043038;amino acid activation;1.02579172457948e-06!GO:0006418;tRNA aminoacylation for protein translation;1.02579172457948e-06!GO:0043039;tRNA aminoacylation;1.02579172457948e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.03366568993813e-06!GO:0043623;cellular protein complex assembly;1.0417541070013e-06!GO:0019899;enzyme binding;1.13593420709614e-06!GO:0006754;ATP biosynthetic process;1.36175003515183e-06!GO:0006753;nucleoside phosphate metabolic process;1.36175003515183e-06!GO:0009892;negative regulation of metabolic process;1.4043004927041e-06!GO:0009060;aerobic respiration;1.54714979093429e-06!GO:0003714;transcription corepressor activity;1.74828349933627e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.85203613798377e-06!GO:0043066;negative regulation of apoptosis;2.13722624879113e-06!GO:0051170;nuclear import;2.15362861412051e-06!GO:0016481;negative regulation of transcription;2.32494502437263e-06!GO:0007051;spindle organization and biogenesis;2.63861598138276e-06!GO:0003713;transcription coactivator activity;2.75847766951261e-06!GO:0006606;protein import into nucleus;2.76041815866678e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.95327276397149e-06!GO:0045786;negative regulation of progression through cell cycle;3.01936152093067e-06!GO:0003924;GTPase activity;3.20667365320641e-06!GO:0051246;regulation of protein metabolic process;3.57700094892494e-06!GO:0045259;proton-transporting ATP synthase complex;3.99352432596791e-06!GO:0000075;cell cycle checkpoint;4.35924195211428e-06!GO:0003724;RNA helicase activity;4.6387730664466e-06!GO:0009056;catabolic process;5.28618700573739e-06!GO:0016787;hydrolase activity;5.78458272686543e-06!GO:0008094;DNA-dependent ATPase activity;5.88889003320609e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.25979184724477e-06!GO:0003682;chromatin binding;6.39263610796811e-06!GO:0009117;nucleotide metabolic process;7.06900325204281e-06!GO:0051427;hormone receptor binding;7.15922006006707e-06!GO:0048475;coated membrane;7.75561838242557e-06!GO:0030117;membrane coat;7.75561838242557e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.02935615003661e-06!GO:0044431;Golgi apparatus part;9.44968035554076e-06!GO:0051188;cofactor biosynthetic process;1.13837622120332e-05!GO:0007005;mitochondrion organization and biogenesis;1.17266629624836e-05!GO:0051168;nuclear export;1.17694869029489e-05!GO:0004674;protein serine/threonine kinase activity;1.25524351835314e-05!GO:0005769;early endosome;1.29395900784548e-05!GO:0006916;anti-apoptosis;1.38599855380846e-05!GO:0035257;nuclear hormone receptor binding;1.65736177904516e-05!GO:0005798;Golgi-associated vesicle;1.82523225997097e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.30149913062047e-05!GO:0045333;cellular respiration;2.76339023384458e-05!GO:0004298;threonine endopeptidase activity;2.7776722517119e-05!GO:0005525;GTP binding;2.93871483435101e-05!GO:0005874;microtubule;3.35842424217053e-05!GO:0006099;tricarboxylic acid cycle;3.42210553664332e-05!GO:0046356;acetyl-CoA catabolic process;3.42210553664332e-05!GO:0006613;cotranslational protein targeting to membrane;3.66157152951104e-05!GO:0031497;chromatin assembly;3.98553575377492e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.99309146726015e-05!GO:0031252;leading edge;4.87282402542339e-05!GO:0031323;regulation of cellular metabolic process;4.99957307518978e-05!GO:0044440;endosomal part;5.08008548325057e-05!GO:0010008;endosome membrane;5.08008548325057e-05!GO:0016023;cytoplasmic membrane-bound vesicle;5.15760981351983e-05!GO:0031988;membrane-bound vesicle;5.21065950329295e-05!GO:0006084;acetyl-CoA metabolic process;5.57034824661918e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.00958111333443e-05!GO:0006302;double-strand break repair;6.12121496928213e-05!GO:0008092;cytoskeletal protein binding;6.12878186829213e-05!GO:0005762;mitochondrial large ribosomal subunit;6.68416899275007e-05!GO:0000315;organellar large ribosomal subunit;6.68416899275007e-05!GO:0008361;regulation of cell size;7.30163672055466e-05!GO:0005905;coated pit;7.86249049824137e-05!GO:0016779;nucleotidyltransferase activity;8.50320156080925e-05!GO:0006752;group transfer coenzyme metabolic process;9.20738959916275e-05!GO:0016049;cell growth;9.23098953555082e-05!GO:0001558;regulation of cell growth;9.25968616909442e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000100640489213774!GO:0031982;vesicle;0.000101768958471293!GO:0000082;G1/S transition of mitotic cell cycle;0.00010310817228862!GO:0030036;actin cytoskeleton organization and biogenesis;0.000111754115465146!GO:0008186;RNA-dependent ATPase activity;0.000116570482424002!GO:0031072;heat shock protein binding;0.000116570482424002!GO:0031410;cytoplasmic vesicle;0.000125221594672502!GO:0008654;phospholipid biosynthetic process;0.000126104517813524!GO:0005788;endoplasmic reticulum lumen;0.000135033931529757!GO:0000776;kinetochore;0.000135272371617493!GO:0007243;protein kinase cascade;0.000143493238477422!GO:0003729;mRNA binding;0.000146682313894616!GO:0043021;ribonucleoprotein binding;0.000146682313894616!GO:0051187;cofactor catabolic process;0.000155384018900726!GO:0015631;tubulin binding;0.000155540734155615!GO:0009108;coenzyme biosynthetic process;0.00015685512396711!GO:0051789;response to protein stimulus;0.000173670118012304!GO:0006986;response to unfolded protein;0.000173670118012304!GO:0006334;nucleosome assembly;0.000174907436740345!GO:0030867;rough endoplasmic reticulum membrane;0.000179598476523435!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000189795736664877!GO:0016363;nuclear matrix;0.000216414417057572!GO:0005773;vacuole;0.000220522448675909!GO:0007093;mitotic cell cycle checkpoint;0.000233020762704765!GO:0009109;coenzyme catabolic process;0.000244188846468377!GO:0048471;perinuclear region of cytoplasm;0.000251323874128717!GO:0006338;chromatin remodeling;0.000252141968047511!GO:0006350;transcription;0.000271838718443664!GO:0000314;organellar small ribosomal subunit;0.000282571614908905!GO:0005763;mitochondrial small ribosomal subunit;0.000282571614908905!GO:0000139;Golgi membrane;0.000296514575214394!GO:0045941;positive regulation of transcription;0.000301286384121741!GO:0051052;regulation of DNA metabolic process;0.000305838285437993!GO:0032561;guanyl ribonucleotide binding;0.000306111973862519!GO:0019001;guanyl nucleotide binding;0.000306111973862519!GO:0006310;DNA recombination;0.000322901493277788!GO:0008022;protein C-terminus binding;0.000323101648972562!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00032399851092175!GO:0016301;kinase activity;0.000339862700078565!GO:0003690;double-stranded DNA binding;0.000344219018237988!GO:0007088;regulation of mitosis;0.000355409660838328!GO:0004004;ATP-dependent RNA helicase activity;0.000357528920090361!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000368739942765311!GO:0015399;primary active transmembrane transporter activity;0.000368739942765311!GO:0005048;signal sequence binding;0.000371948115171532!GO:0007017;microtubule-based process;0.000423714360536824!GO:0006352;transcription initiation;0.000426258076027463!GO:0005770;late endosome;0.000449629629638481!GO:0045893;positive regulation of transcription, DNA-dependent;0.000456496002637393!GO:0008250;oligosaccharyl transferase complex;0.000523895627466579!GO:0065007;biological regulation;0.000525239712387141!GO:0000059;protein import into nucleus, docking;0.000554296155231284!GO:0048522;positive regulation of cellular process;0.000557094752525982!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000580992366880186!GO:0030029;actin filament-based process;0.000622228991468926!GO:0019843;rRNA binding;0.000628470660273705!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00064895878690003!GO:0035258;steroid hormone receptor binding;0.000653436476124871!GO:0065009;regulation of a molecular function;0.000683910845278479!GO:0005876;spindle microtubule;0.000709977133448013!GO:0000323;lytic vacuole;0.000715150710872181!GO:0005764;lysosome;0.000715150710872181!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00072471743033378!GO:0007059;chromosome segregation;0.000776284210825717!GO:0006611;protein export from nucleus;0.000798910032194363!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000799003591419845!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000799003591419845!GO:0045892;negative regulation of transcription, DNA-dependent;0.000822620871465309!GO:0043596;nuclear replication fork;0.000827137617401975!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000836981063131769!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000851237461926678!GO:0016044;membrane organization and biogenesis;0.000875045647412273!GO:0051920;peroxiredoxin activity;0.000967512909741432!GO:0004576;oligosaccharyl transferase activity;0.000994727559142251!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000995835047699166!GO:0033116;ER-Golgi intermediate compartment membrane;0.00101831558126737!GO:0030521;androgen receptor signaling pathway;0.00103962472140627!GO:0006612;protein targeting to membrane;0.00106348986779059!GO:0048487;beta-tubulin binding;0.00109202121720228!GO:0003678;DNA helicase activity;0.00109771319396427!GO:0016859;cis-trans isomerase activity;0.00113577373908639!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00121229385935956!GO:0003684;damaged DNA binding;0.00125584294696863!GO:0007264;small GTPase mediated signal transduction;0.00136343451366455!GO:0003899;DNA-directed RNA polymerase activity;0.00136343451366455!GO:0005637;nuclear inner membrane;0.0013913669861625!GO:0032508;DNA duplex unwinding;0.00139874827320982!GO:0032392;DNA geometric change;0.00139874827320982!GO:0051252;regulation of RNA metabolic process;0.00145494359356975!GO:0006892;post-Golgi vesicle-mediated transport;0.00147296057810672!GO:0010468;regulation of gene expression;0.00148259584441785!GO:0005885;Arp2/3 protein complex;0.00157677589370657!GO:0005684;U2-dependent spliceosome;0.0016085794271581!GO:0000792;heterochromatin;0.00172107041149405!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00173758923806047!GO:0048468;cell development;0.00182524990380321!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0018617778726916!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0018617778726916!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0018617778726916!GO:0006402;mRNA catabolic process;0.00187662306675673!GO:0030663;COPI coated vesicle membrane;0.00188036446655185!GO:0030126;COPI vesicle coat;0.00188036446655185!GO:0007052;mitotic spindle organization and biogenesis;0.00190929075923146!GO:0008139;nuclear localization sequence binding;0.00203154979333443!GO:0030132;clathrin coat of coated pit;0.00203204172785721!GO:0040008;regulation of growth;0.0020939750140251!GO:0043492;ATPase activity, coupled to movement of substances;0.00215312567251212!GO:0007050;cell cycle arrest;0.00215826172086989!GO:0030137;COPI-coated vesicle;0.00218531814168768!GO:0044452;nucleolar part;0.00218531814168768!GO:0018196;peptidyl-asparagine modification;0.00222266325517082!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00222266325517082!GO:0009165;nucleotide biosynthetic process;0.00224164717784513!GO:0033673;negative regulation of kinase activity;0.00232768600793824!GO:0006469;negative regulation of protein kinase activity;0.00232768600793824!GO:0045454;cell redox homeostasis;0.00235259047514286!GO:0016197;endosome transport;0.00243891055734826!GO:0043681;protein import into mitochondrion;0.00252851211292319!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00254595225992691!GO:0045792;negative regulation of cell size;0.002570086023819!GO:0031625;ubiquitin protein ligase binding;0.00257077191999819!GO:0015992;proton transport;0.00259091334056019!GO:0046474;glycerophospholipid biosynthetic process;0.00259214540366313!GO:0006818;hydrogen transport;0.00267030501616495!GO:0016272;prefoldin complex;0.00267030501616495!GO:0016853;isomerase activity;0.00271697886666269!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0028002999757099!GO:0030308;negative regulation of cell growth;0.00291197328057101!GO:0015980;energy derivation by oxidation of organic compounds;0.002929091593967!GO:0006268;DNA unwinding during replication;0.00301356987225823!GO:0050681;androgen receptor binding;0.00301356987225823!GO:0042802;identical protein binding;0.00301356987225823!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00301700598661794!GO:0046489;phosphoinositide biosynthetic process;0.00316031524944354!GO:0048500;signal recognition particle;0.00326622545896471!GO:0006401;RNA catabolic process;0.00338903791978279!GO:0006383;transcription from RNA polymerase III promoter;0.00361628861572747!GO:0051348;negative regulation of transferase activity;0.00366764402587237!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00379307758502377!GO:0030518;steroid hormone receptor signaling pathway;0.00379307758502377!GO:0051087;chaperone binding;0.00398125172458859!GO:0031901;early endosome membrane;0.00416526936605635!GO:0017166;vinculin binding;0.00429219409784407!GO:0007346;regulation of progression through mitotic cell cycle;0.00436656772867066!GO:0043601;nuclear replisome;0.0044910849512301!GO:0030894;replisome;0.0044910849512301!GO:0003711;transcription elongation regulator activity;0.00452222522697792!GO:0030176;integral to endoplasmic reticulum membrane;0.00464471413706723!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00499558153146093!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00499558153146093!GO:0006414;translational elongation;0.00505160216486216!GO:0040029;regulation of gene expression, epigenetic;0.00517793919713729!GO:0031124;mRNA 3'-end processing;0.00568230950156222!GO:0030658;transport vesicle membrane;0.00568230950156222!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00574848645856977!GO:0008047;enzyme activator activity;0.00595380626987908!GO:0030133;transport vesicle;0.00609619962711702!GO:0030384;phosphoinositide metabolic process;0.00619176197867206!GO:0004527;exonuclease activity;0.0061955585233745!GO:0006284;base-excision repair;0.00627878118459075!GO:0006376;mRNA splice site selection;0.00628772725377335!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00628772725377335!GO:0000152;nuclear ubiquitin ligase complex;0.00630755192820721!GO:0007006;mitochondrial membrane organization and biogenesis;0.00632909413957315!GO:0006405;RNA export from nucleus;0.0064519419227476!GO:0016251;general RNA polymerase II transcription factor activity;0.00646458556065014!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00646458556065014!GO:0008312;7S RNA binding;0.00646488377078654!GO:0005856;cytoskeleton;0.0066108402248757!GO:0001726;ruffle;0.00671907672619302!GO:0000910;cytokinesis;0.0071138825329756!GO:0008629;induction of apoptosis by intracellular signals;0.00742810514919391!GO:0050790;regulation of catalytic activity;0.00742810514919391!GO:0032774;RNA biosynthetic process;0.00742810514919391!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00748012028746801!GO:0005791;rough endoplasmic reticulum;0.00769474166234945!GO:0000922;spindle pole;0.00774834694383672!GO:0022890;inorganic cation transmembrane transporter activity;0.00780722997024409!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00827476489166267!GO:0043284;biopolymer biosynthetic process;0.00838268883688599!GO:0006650;glycerophospholipid metabolic process;0.00848555276189877!GO:0006351;transcription, DNA-dependent;0.00903823083093149!GO:0006220;pyrimidine nucleotide metabolic process;0.00920030760439572!GO:0003702;RNA polymerase II transcription factor activity;0.00927263291631577!GO:0008287;protein serine/threonine phosphatase complex;0.00927263291631577!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00930391808253127!GO:0045047;protein targeting to ER;0.00930391808253127!GO:0030134;ER to Golgi transport vesicle;0.00963278893179047!GO:0030660;Golgi-associated vesicle membrane;0.0101755780023335!GO:0005869;dynactin complex;0.0102622002643615!GO:0006275;regulation of DNA replication;0.0105200905930915!GO:0006839;mitochondrial transport;0.0105584392785298!GO:0005096;GTPase activator activity;0.0106056676059813!GO:0046467;membrane lipid biosynthetic process;0.010918713130336!GO:0008033;tRNA processing;0.0109673686893244!GO:0045936;negative regulation of phosphate metabolic process;0.0110758982824076!GO:0006626;protein targeting to mitochondrion;0.0112571026585163!GO:0006091;generation of precursor metabolites and energy;0.0112693944216106!GO:0044450;microtubule organizing center part;0.0115459207785985!GO:0043130;ubiquitin binding;0.0116409025449502!GO:0032182;small conjugating protein binding;0.0116409025449502!GO:0000228;nuclear chromosome;0.0116444728184715!GO:0007242;intracellular signaling cascade;0.0121465230342313!GO:0006270;DNA replication initiation;0.0121465230342313!GO:0006595;polyamine metabolic process;0.0121754405693794!GO:0030127;COPII vesicle coat;0.0125024500753029!GO:0012507;ER to Golgi transport vesicle membrane;0.0125024500753029!GO:0004177;aminopeptidase activity;0.0127500004183432!GO:0030027;lamellipodium;0.0128126287126016!GO:0051059;NF-kappaB binding;0.0128747258078493!GO:0006891;intra-Golgi vesicle-mediated transport;0.0129181991785878!GO:0051101;regulation of DNA binding;0.0132019034824129!GO:0004003;ATP-dependent DNA helicase activity;0.013242122188432!GO:0043624;cellular protein complex disassembly;0.0132613126334718!GO:0006984;ER-nuclear signaling pathway;0.0133229765372907!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0137086813403328!GO:0015002;heme-copper terminal oxidase activity;0.0137086813403328!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0137086813403328!GO:0004129;cytochrome-c oxidase activity;0.0137086813403328!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0138168391945699!GO:0007265;Ras protein signal transduction;0.0139206531965362!GO:0045449;regulation of transcription;0.0139923284725939!GO:0042770;DNA damage response, signal transduction;0.0140294616437285!GO:0045926;negative regulation of growth;0.0141513277169071!GO:0043022;ribosome binding;0.0141513277169071!GO:0004672;protein kinase activity;0.0141876836948059!GO:0005669;transcription factor TFIID complex;0.014214061351715!GO:0007021;tubulin folding;0.0142479375389222!GO:0043488;regulation of mRNA stability;0.0142513113248849!GO:0043487;regulation of RNA stability;0.0142513113248849!GO:0007569;cell aging;0.0149507031793588!GO:0030522;intracellular receptor-mediated signaling pathway;0.015040167273992!GO:0005680;anaphase-promoting complex;0.015040167273992!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0150482452087949!GO:0009116;nucleoside metabolic process;0.0156229224332932!GO:0016491;oxidoreductase activity;0.0156598002870907!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0156653335838728!GO:0022415;viral reproductive process;0.0164689920012521!GO:0007040;lysosome organization and biogenesis;0.01655330066559!GO:0031461;cullin-RING ubiquitin ligase complex;0.0166708461541714!GO:0000070;mitotic sister chromatid segregation;0.0167895820655317!GO:0035035;histone acetyltransferase binding;0.0171674695057818!GO:0046966;thyroid hormone receptor binding;0.0171941991816672!GO:0016791;phosphoric monoester hydrolase activity;0.0172374791450411!GO:0051098;regulation of binding;0.0172919590587443!GO:0005832;chaperonin-containing T-complex;0.0175179142098644!GO:0005652;nuclear lamina;0.0176174608251898!GO:0051287;NAD binding;0.0179946421579334!GO:0000725;recombinational repair;0.0181027150314247!GO:0000724;double-strand break repair via homologous recombination;0.0181027150314247!GO:0003779;actin binding;0.0183709196507089!GO:0050811;GABA receptor binding;0.018670920856384!GO:0046519;sphingoid metabolic process;0.0192215591561625!GO:0019867;outer membrane;0.0192215591561625!GO:0047485;protein N-terminus binding;0.0193638745533007!GO:0006505;GPI anchor metabolic process;0.0195322411840278!GO:0048518;positive regulation of biological process;0.0195322411840278!GO:0006506;GPI anchor biosynthetic process;0.0195322411840278!GO:0000819;sister chromatid segregation;0.0201430405657219!GO:0006144;purine base metabolic process;0.0203645716480237!GO:0006672;ceramide metabolic process;0.0205160308931278!GO:0031968;organelle outer membrane;0.0209940158549319!GO:0042326;negative regulation of phosphorylation;0.0210718239229727!GO:0030118;clathrin coat;0.0212193840513069!GO:0051338;regulation of transferase activity;0.0217331097717639!GO:0043065;positive regulation of apoptosis;0.0217331097717639!GO:0042393;histone binding;0.0218125277060933!GO:0006897;endocytosis;0.0218852887417437!GO:0010324;membrane invagination;0.0218852887417437!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0221083714191493!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0222242959682165!GO:0031123;RNA 3'-end processing;0.0222242959682165!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0222990382200062!GO:0046822;regulation of nucleocytoplasmic transport;0.0222990382200062!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0225492966033131!GO:0010257;NADH dehydrogenase complex assembly;0.0225492966033131!GO:0033108;mitochondrial respiratory chain complex assembly;0.0225492966033131!GO:0005083;small GTPase regulator activity;0.0228576995513045!GO:0032984;macromolecular complex disassembly;0.0229707218769084!GO:0008017;microtubule binding;0.0231953642306404!GO:0046983;protein dimerization activity;0.0237765339385205!GO:0006458;'de novo' protein folding;0.0237805005041138!GO:0051084;'de novo' posttranslational protein folding;0.0237805005041138!GO:0045045;secretory pathway;0.0237805005041138!GO:0043189;H4/H2A histone acetyltransferase complex;0.0246605366036168!GO:0000287;magnesium ion binding;0.0247189829694053!GO:0043549;regulation of kinase activity;0.0247298412966571!GO:0030659;cytoplasmic vesicle membrane;0.0248678824774912!GO:0006950;response to stress;0.0251100001986214!GO:0009112;nucleobase metabolic process;0.0251181042581329!GO:0006497;protein amino acid lipidation;0.0253781786533301!GO:0005862;muscle thin filament tropomyosin;0.0257175287153429!GO:0043068;positive regulation of programmed cell death;0.0258543996352575!GO:0006509;membrane protein ectodomain proteolysis;0.0258773415811009!GO:0033619;membrane protein proteolysis;0.0258773415811009!GO:0003746;translation elongation factor activity;0.0261327537599853!GO:0000118;histone deacetylase complex;0.0261327537599853!GO:0006378;mRNA polyadenylation;0.0263953131912883!GO:0051235;maintenance of localization;0.0266051854410272!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0266432133098252!GO:0043087;regulation of GTPase activity;0.0268411384365717!GO:0006289;nucleotide-excision repair;0.0269668536024783!GO:0031577;spindle checkpoint;0.0269933060230712!GO:0006607;NLS-bearing substrate import into nucleus;0.0270112025778344!GO:0008536;Ran GTPase binding;0.0270112025778344!GO:0005875;microtubule associated complex;0.0273025818965673!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0280957043745323!GO:0045334;clathrin-coated endocytic vesicle;0.0288450214319959!GO:0032507;maintenance of cellular protein localization;0.0288870177996721!GO:0008632;apoptotic program;0.0290857963265324!GO:0000086;G2/M transition of mitotic cell cycle;0.029507351333505!GO:0030496;midbody;0.030519624235279!GO:0009893;positive regulation of metabolic process;0.0305408704924701!GO:0000123;histone acetyltransferase complex;0.031209845227384!GO:0044454;nuclear chromosome part;0.0314151927372713!GO:0035267;NuA4 histone acetyltransferase complex;0.0317581909102473!GO:0043241;protein complex disassembly;0.0322079651116307!GO:0042158;lipoprotein biosynthetic process;0.0322770821470179!GO:0031371;ubiquitin conjugating enzyme complex;0.0324776899452651!GO:0004860;protein kinase inhibitor activity;0.032524563978015!GO:0007033;vacuole organization and biogenesis;0.032524563978015!GO:0005099;Ras GTPase activator activity;0.0325667381113412!GO:0005521;lamin binding;0.0329260455096221!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0329260455096221!GO:0016126;sterol biosynthetic process;0.0330653588956474!GO:0005663;DNA replication factor C complex;0.0334015373786496!GO:0046982;protein heterodimerization activity;0.0337751341733056!GO:0006301;postreplication repair;0.0339073739007583!GO:0008180;signalosome;0.0341129994040415!GO:0030125;clathrin vesicle coat;0.0344925573731122!GO:0030665;clathrin coated vesicle membrane;0.0344925573731122!GO:0051540;metal cluster binding;0.0345084978415173!GO:0051536;iron-sulfur cluster binding;0.0345084978415173!GO:0016569;covalent chromatin modification;0.0350749060720978!GO:0004722;protein serine/threonine phosphatase activity;0.0352352665309207!GO:0008168;methyltransferase activity;0.0355919942647811!GO:0030119;AP-type membrane coat adaptor complex;0.0360489649706398!GO:0030031;cell projection biogenesis;0.0363156163959984!GO:0010149;senescence;0.036532751998339!GO:0000209;protein polyubiquitination;0.0374364037475965!GO:0000178;exosome (RNase complex);0.0374451274181184!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0374857176343738!GO:0048144;fibroblast proliferation;0.0379787724850038!GO:0048145;regulation of fibroblast proliferation;0.0379787724850038!GO:0016741;transferase activity, transferring one-carbon groups;0.0381109194689898!GO:0048146;positive regulation of fibroblast proliferation;0.0381930001416556!GO:0005741;mitochondrial outer membrane;0.0386762445209009!GO:0031575;G1/S transition checkpoint;0.0389453395200097!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0389453395200097!GO:0007030;Golgi organization and biogenesis;0.0389453395200097!GO:0006354;RNA elongation;0.0392492101592846!GO:0016311;dephosphorylation;0.0392926462577668!GO:0007406;negative regulation of neuroblast proliferation;0.0396394579141733!GO:0043414;biopolymer methylation;0.040320084010922!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0406651407454356!GO:0030880;RNA polymerase complex;0.0407243010192845!GO:0022408;negative regulation of cell-cell adhesion;0.0407934920688067!GO:0043086;negative regulation of catalytic activity;0.0420072948724666!GO:0030911;TPR domain binding;0.0422012495128865!GO:0044433;cytoplasmic vesicle part;0.0429621049813017!GO:0032259;methylation;0.0430496334041066!GO:0031529;ruffle organization and biogenesis;0.0433677448735501!GO:0006695;cholesterol biosynthetic process;0.0440169535927188!GO:0000049;tRNA binding;0.044301065447935!GO:0045185;maintenance of protein localization;0.044578960802059!GO:0045859;regulation of protein kinase activity;0.0449537579118275!GO:0000339;RNA cap binding;0.0450100279129036!GO:0050178;phenylpyruvate tautomerase activity;0.0452152299703091!GO:0046426;negative regulation of JAK-STAT cascade;0.0452181248279195!GO:0032906;transforming growth factor-beta2 production;0.0457364010955254!GO:0032909;regulation of transforming growth factor-beta2 production;0.0457364010955254!GO:0031628;opioid receptor binding;0.0458963162441787!GO:0031852;mu-type opioid receptor binding;0.0458963162441787!GO:0005784;translocon complex;0.0466209546632265!GO:0008408;3'-5' exonuclease activity;0.0471216284020791!GO:0005881;cytoplasmic microtubule;0.0484432150547249!GO:0016407;acetyltransferase activity;0.0485385426326309!GO:0051539;4 iron, 4 sulfur cluster binding;0.0491089025906631!GO:0051651;maintenance of cellular localization;0.0492271177433196!GO:0046483;heterocycle metabolic process;0.0492302452656874!GO:0032200;telomere organization and biogenesis;0.0493377844208255!GO:0000723;telomere maintenance;0.0493377844208255
|sample_id=10647
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=eye
|top_motifs=E2F1..5:1.37233823133;RXR{A,B,G}:1.33047277231;POU1F1:1.26195268986;GFI1:1.15946924817;TFDP1:1.12204384832;NKX2-3_NKX2-5:1.06124843827;PAX1,9:0.864068453272;FOXQ1:0.842933866292;ZBTB6:0.809529412008;POU3F1..4:0.776421135483;ZNF143:0.762227515936;TFAP2B:0.748848631532;NKX3-1:0.711699445801;ARID5B:0.709438069694;ONECUT1,2:0.691691975956;PAX6:0.690742648311;NRF1:0.690212928583;TFAP2{A,C}:0.634579483249;bHLH_family:0.62651635538;BREu{core}:0.583759296599;ALX1:0.563028061443;HOX{A5,B5}:0.562709954134;CDC5L:0.550732462143;FOX{I1,J2}:0.546378788789;RFX1:0.545537748571;CDX1,2,4:0.537331814549;EGR1..3:0.479065118073;MYB:0.463642124101;GFI1B:0.459993875319;SOX2:0.455249607221;HOXA9_MEIS1:0.444398040557;PDX1:0.441308883688;TAL1_TCF{3,4,12}:0.44119165569;DMAP1_NCOR{1,2}_SMARC:0.438983902977;FOXP3:0.432798346078;NFIX:0.428215618942;RORA:0.427142228038;NKX6-1,2:0.419803078385;RBPJ:0.411627400552;SREBF1,2:0.40744335375;NFY{A,B,C}:0.394594481375;ADNP_IRX_SIX_ZHX:0.390119606992;TEAD1:0.378660367948;XCPE1{core}:0.368988370629;FOXN1:0.339475811017;ZNF384:0.317897333557;PPARG:0.317119412126;FOXD3:0.305458697591;STAT1,3:0.301155685787;MYOD1:0.292041944684;FOX{D1,D2}:0.287263038773;TFCP2:0.267854258154;GZF1:0.264382685424;HIC1:0.262102103606;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.260678561791;CUX2:0.236204154284;TBX4,5:0.231234178312;NANOG:0.227750529891;HSF1,2:0.226147985107;ELK1,4_GABP{A,B1}:0.224110954075;VSX1,2:0.223765975893;BACH2:0.214589138905;MZF1:0.195085362466;MED-1{core}:0.182037372679;HOX{A4,D4}:0.179665799492;OCT4_SOX2{dimer}:0.16579641085;FOX{F1,F2,J1}:0.164747345788;MTF1:0.163631882642;HMGA1,2:0.15827336301;HAND1,2:0.152176244983;FOXM1:0.15170925335;GTF2I:0.149157794006;PRRX1,2:0.141106935726;TP53:0.139694957859;PITX1..3:0.135604990828;T:0.12841165897;BPTF:0.113891971359;HBP1_HMGB_SSRP1_UBTF:0.104988190912;EVI1:0.104222854074;LMO2:0.101106756188;PAX4:0.100556609441;NR3C1:0.0957546553053;ESRRA:0.09234443675;ZBTB16:0.0875592897409;FOS_FOS{B,L1}_JUN{B,D}:0.0705185126281;HNF1A:0.0578062965357;GTF2A1,2:0.0556514223398;AIRE:0.0528112621192;ATF4:0.0506045134683;NFE2L2:0.0462395669203;STAT5{A,B}:0.0462354949115;TLX1..3_NFIC{dimer}:0.0451401493542;SOX{8,9,10}:0.010205987712;NFATC1..3:0.0093282883263;SOX17:0.00791585471534;ZFP161:0.00706007288248;PAX8:-0.00512300764124;PRDM1:-0.0161884921868;MAZ:-0.0276509421279;DBP:-0.0277167918432;GATA6:-0.0366584910975;FOXA2:-0.0535757437249;CRX:-0.054930393049;ZNF148:-0.0632434071086;NFE2:-0.0673246690051;HNF4A_NR2F1,2:-0.0690109122886;NR1H4:-0.0772025815441;NFIL3:-0.0811320904787;LEF1_TCF7_TCF7L1,2:-0.0815777375885;NKX3-2:-0.0839498017849;HLF:-0.0970917363588;FOSL2:-0.105311593648;SPZ1:-0.105493398274;NKX2-1,4:-0.110740332576;NFKB1_REL_RELA:-0.119386050084;PBX1:-0.120397511609;POU2F1..3:-0.12454999949;PATZ1:-0.125787086605;AHR_ARNT_ARNT2:-0.159171024033;MYBL2:-0.16795517979;AR:-0.168253771362;FOXO1,3,4:-0.169889140878;RUNX1..3:-0.173520632675;NFE2L1:-0.17391585785;NHLH1,2:-0.176148302906;PAX3,7:-0.17723192358;GCM1,2:-0.193632227923;EN1,2:-0.21544758008;IRF7:-0.21950816211;HIF1A:-0.222412352102;STAT2,4,6:-0.226434624489;SNAI1..3:-0.22811685061;SMAD1..7,9:-0.234662193194;ZNF238:-0.238985693755;RXRA_VDR{dimer}:-0.25416775799;TEF:-0.256860816538;POU5F1:-0.259671466857;POU6F1:-0.277441643022;SPIB:-0.295842711069;SRF:-0.297196127212;JUN:-0.298875441311;MYFfamily:-0.300503228746;NR6A1:-0.301638900131;HOX{A6,A7,B6,B7}:-0.313607437014;SP1:-0.313884956887;XBP1:-0.315287272877;SOX5:-0.316153217582;ZEB1:-0.319615040292;LHX3,4:-0.331075645364;CEBPA,B_DDIT3:-0.335995329941;ATF2:-0.339535067429;ZIC1..3:-0.343309135937;MEF2{A,B,C,D}:-0.347782717871;GATA4:-0.348923471779;TOPORS:-0.356405847707;ATF5_CREB3:-0.362978619122;REST:-0.382892857839;ETS1,2:-0.402090102648;GLI1..3:-0.402977879736;IKZF2:-0.409073793494;FOXP1:-0.410039792311;SPI1:-0.421808339416;TFAP4:-0.428225531529;IKZF1:-0.431094741802;YY1:-0.466621447855;RREB1:-0.470426616313;UFEwm:-0.474885855092;NR5A1,2:-0.482256299855;KLF4:-0.518151972812;ZNF423:-0.526973603581;RFX2..5_RFXANK_RFXAP:-0.530472742728;HMX1:-0.531238946351;IRF1,2:-0.565821359369;PAX5:-0.568164268803;MTE{core}:-0.57889608048;ELF1,2,4:-0.587700004387;PAX2:-0.602160328176;ESR1:-0.605924770834;MAFB:-0.654619253723;TGIF1:-0.701995991754;NANOG{mouse}:-0.70911106232;EBF1:-0.719638865614;CREB1:-0.726789260439;NKX2-2,8:-0.747906797141;TBP:-0.834623115156;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.897847768788;ATF6:-1.00733764525;FOXL1:-1.1541460828;TLX2:-1.2459923268;ALX4:-1.30152158989;HES1:-1.34167174031;EP300:-1.44851587657
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10647-109A8;search_select_hide=table117:FF:10647-109A8
}}
}}

Latest revision as of 14:32, 3 June 2020

Name:lens epithelial cell line:SRA 01/04
Species:Human (Homo sapiens)
Library ID:CNhs11750
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueeye
dev stageNA
sexmale
age3 months
cell typelens epithelial cell
cell lineSRA 01/04
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005182
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11750 CAGE DRX007918 DRR008790
Accession ID Hg19

Library idBAMCTSS
CNhs11750 DRZ000215 DRZ001600
Accession ID Hg38

Library idBAMCTSS
CNhs11750 DRZ011565 DRZ012950
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0925
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.419
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0525
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0657
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0559
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0627
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.174
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0785
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.482
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.305
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.342
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11750

Jaspar motifP-value
MA0002.20.0267
MA0003.10.545
MA0004.10.0865
MA0006.10.728
MA0007.10.728
MA0009.10.699
MA0014.10.127
MA0017.10.0986
MA0018.20.907
MA0019.10.165
MA0024.11.94636e-8
MA0025.10.452
MA0027.10.968
MA0028.10.309
MA0029.10.471
MA0030.10.123
MA0031.10.925
MA0035.20.402
MA0038.14.46942e-5
MA0039.20.184
MA0040.10.865
MA0041.10.0625
MA0042.10.212
MA0043.10.336
MA0046.10.537
MA0047.20.516
MA0048.10.615
MA0050.12.61657e-4
MA0051.10.00286
MA0052.10.022
MA0055.10.283
MA0057.10.527
MA0058.10.159
MA0059.10.539
MA0060.18.06324e-6
MA0061.10.197
MA0062.20.405
MA0065.20.124
MA0066.10.769
MA0067.10.117
MA0068.10.542
MA0069.10.0634
MA0070.10.734
MA0071.10.365
MA0072.10.28
MA0073.10.707
MA0074.10.956
MA0076.10.154
MA0077.10.641
MA0078.10.647
MA0079.20.307
MA0080.22.76046e-7
MA0081.10.433
MA0083.10.607
MA0084.10.514
MA0087.10.98
MA0088.10.82
MA0090.10.0376
MA0091.10.214
MA0092.10.437
MA0093.10.0515
MA0099.29.12035e-7
MA0100.10.11
MA0101.10.357
MA0102.20.00231
MA0103.10.417
MA0104.20.809
MA0105.10.0105
MA0106.10.826
MA0107.10.678
MA0108.23.05525e-4
MA0111.10.236
MA0112.27.84827e-4
MA0113.10.814
MA0114.10.344
MA0115.10.749
MA0116.17.32257e-4
MA0117.10.497
MA0119.10.103
MA0122.10.294
MA0124.10.485
MA0125.10.439
MA0131.10.16
MA0135.10.585
MA0136.10.00787
MA0137.20.293
MA0138.20.029
MA0139.10.0587
MA0140.10.972
MA0141.10.235
MA0142.10.839
MA0143.10.241
MA0144.10.129
MA0145.10.215
MA0146.10.2
MA0147.10.841
MA0148.10.935
MA0149.10.683
MA0150.10.763
MA0152.10.916
MA0153.10.855
MA0154.10.0312
MA0155.10.398
MA0156.10.557
MA0157.10.302
MA0159.10.186
MA0160.10.391
MA0162.10.241
MA0163.10.00295
MA0164.10.793
MA0258.10.255
MA0259.10.862



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11750

Novel motifP-value
10.0612
100.227
1000.986
1010.328
1020.161
1030.757
1040.81
1050.767
1060.00729
1070.313
1080.791
1090.716
110.248
1100.227
1110.424
1120.123
1130.00403
1140.15
1150.409
1160.0843
1170.3
1180.966
1190.123
120.864
1200.283
1210.327
1220.18
1230.0632
1240.262
1250.554
1260.0687
1270.747
1280.0179
1290.409
130.297
1300.16
1310.0332
1320.502
1330.635
1340.395
1350.00808
1360.857
1370.31
1380.856
1390.0202
140.509
1400.209
1410.956
1420.881
1430.524
1440.983
1450.233
1460.983
1470.456
1481.16048e-4
1490.06
150.397
1500.569
1510.309
1520.131
1530.112
1540.713
1550.283
1560.432
1570.622
1580.273
1590.138
160.43
1600.0311
1610.304
1620.457
1630.767
1640.893
1650.153
1660.673
1670.247
1680.144
1690.0109
170.329
180.59
190.155
20.703
200.257
210.149
220.315
230.81
240.618
250.209
260.801
270.0158
280.52
290.427
30.0728
300.882
310.459
320.171
330.509
340.393
350.402
360.401
370.272
380.659
390.569
40.207
400.868
410.464
420.314
430.123
440.395
450.871
460.1
470.626
480.133
490.241
50.416
500.913
510.802
520.353
530.185
540.877
550.749
560.973
570.296
580.0161
590.0507
60.317
600.0191
610.78
620.0189
630.182
640.204
650.472
660.011
670.421
680.469
690.442
70.339
700.382
710.617
720.491
730.0845
740.897
750.245
760.786
770.201
780.134
790.185
80.152
800.472
810.257
820.00413
830.21
840.567
850.018
860.465
870.634
880.571
890.0402
90.303
900.351
910.555
920.067
930.507
940.576
950.471
960.419
970.205
980.864
990.994



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11750


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101120 (epithelial cell line sample)
0101874 (lens epithelial cell line sample)
0103071 (HLEC-SRA 01/04 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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