FFCP PHASE1:Hg19::chr12:96390091..96390105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3034 | |EntrezGene=3034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4806 | |HGNC=4806 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXF2 | |UniProt=F5GXF2 | ||
|association_with_transcript=16bp_to_ENST00000538703_5end | |||
|cluster_id=chr12:96390091..96390105,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_HAL_5end | |||
|id=chr12:96390091..96390105,- | |||
|ontology_enrichment_celltype=CL:0002057!8.07e-48!42;CL:0000860!7.99e-44!45;CL:0000766!5.66e-41!76;CL:0000763!5.64e-40!112;CL:0000049!5.64e-40!112;CL:0002194!5.55e-33!63;CL:0000576!5.55e-33!63;CL:0000040!5.55e-33!63;CL:0000559!5.55e-33!63;CL:0000037!7.20e-32!172;CL:0000566!7.20e-32!172;CL:0002009!1.33e-31!65;CL:0000839!4.11e-30!70;CL:0000557!9.79e-30!71;CL:0002032!4.98e-29!165;CL:0000837!4.98e-29!165;CL:0000988!5.03e-29!182;CL:0000738!3.64e-26!140;CL:0002087!5.59e-22!119;CL:0002031!2.76e-18!124;CL:0000094!1.58e-15!8;CL:0002393!9.35e-15!9;CL:0002397!9.35e-15!9;CL:0000081!9.03e-11!11;CL:0000134!8.41e-09!358;CL:0002320!2.71e-08!365;CL:0000775!2.65e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.31e-19;8!CL:0000775;2.50e-14;3!CL:0000081;4.51e-14;11!CL:0000860;1.16e-12;33!CL:0002057;1.16e-12;33!CL:0000766;1.36e-11;69!CL:0000763;3.30e-11;100!CL:0000473;4.98e-11;39!CL:0000234;4.98e-11;39!CL:0000576;7.33e-11;48!CL:0000771;3.20e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.67e-27,108;CL:0000049,9.67e-27,108;CL:0000766,4.63e-24,72;CL:0000094,1.28e-19,8;CL:0000860,6.99e-18,42;CL:0002057,6.99e-18,42;CL:0000037,5.58e-16,168;CL:0002032,1.10e-15,161;CL:0000837,1.10e-15,161;CL:0000473,3.15e-15,48;CL:0000234,3.15e-15,48;CL:0002194,3.77e-15,59;CL:0000576,3.77e-15,59;CL:0000040,3.77e-15,59;CL:0000559,3.77e-15,59;CL:0000988,8.24e-15,177;CL:0000557,1.22e-14,67;CL:0002009,1.55e-14,61;CL:0000775,2.51e-14,3;CL:0000081,4.42e-14,11;CL:0000839,3.63e-13,66;CL:0000738,2.14e-11,136;CL:0000771,3.21e-10,2;CL:0002087,5.84e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-12;42!CL:0000049;7.38e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.98e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-39!102;UBERON:0003061!1.04e-39!102;UBERON:0002193!2.49e-36!112;UBERON:0002405!2.28e-28!115;UBERON:0002371!1.34e-26!80;UBERON:0001474!6.93e-24!86;UBERON:0004765!1.51e-18!101;UBERON:0001434!1.51e-18!101;UBERON:0000178!5.08e-14!15;UBERON:0000179!5.08e-14!15;UBERON:0000463!5.08e-14!15;UBERON:0003081!1.05e-11!216;UBERON:0002384!1.31e-07!375;UBERON:0002204!5.67e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.59e-22;15!UBERON:0000179;5.59e-22;15!UBERON:0000463;5.59e-22;15!UBERON:0002390;2.11e-13;32!UBERON:0002193;9.91e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.54e-25,98;UBERON:0003061,1.54e-25,98;UBERON:0002193,1.81e-24,108;UBERON:0000178,7.29e-22,15;UBERON:0000179,7.29e-22,15;UBERON:0000463,7.29e-22,15;UBERON:0002371,1.87e-12,76;UBERON:0002405,4.50e-12,93;UBERON:0001474,2.90e-11,82;UBERON:0004765,6.32e-10,90;UBERON:0003081,4.62e-09,203;UBERON:0001434,1.47e-08,100 | |||
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| ||
|short_description=p4@HAL | |||
}} | }} |
Latest revision as of 03:12, 16 September 2015
Short description: | p4@HAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HAL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 16bp_to_ENST00000538703_5end |
EntrezGene: | HAL |
HGNC: | 4806 |
UniProt: | F5GXF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.67e-27 | 108 |
common myeloid progenitor | 9.67e-27 | 108 |
myeloid leukocyte | 4.63e-24 | 72 |
granulocyte | 1.28e-19 | 8 |
classical monocyte | 6.99e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.99e-18 | 42 |
hematopoietic stem cell | 5.58e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.10e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-15 | 161 |
defensive cell | 3.15e-15 | 48 |
phagocyte | 3.15e-15 | 48 |
monopoietic cell | 3.77e-15 | 59 |
monocyte | 3.77e-15 | 59 |
monoblast | 3.77e-15 | 59 |
promonocyte | 3.77e-15 | 59 |
hematopoietic cell | 8.24e-15 | 177 |
granulocyte monocyte progenitor cell | 1.22e-14 | 67 |
macrophage dendritic cell progenitor | 1.55e-14 | 61 |
neutrophil | 2.51e-14 | 3 |
blood cell | 4.42e-14 | 11 |
myeloid lineage restricted progenitor cell | 3.63e-13 | 66 |
leukocyte | 2.14e-11 | 136 |
eosinophil | 3.21e-10 | 2 |
nongranular leukocyte | 5.84e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.54e-25 | 98 |
blood island | 1.54e-25 | 98 |
hemolymphoid system | 1.81e-24 | 108 |
blood | 7.29e-22 | 15 |
haemolymphatic fluid | 7.29e-22 | 15 |
organism substance | 7.29e-22 | 15 |
bone marrow | 1.87e-12 | 76 |
immune system | 4.50e-12 | 93 |
bone element | 2.90e-11 | 82 |
skeletal element | 6.32e-10 | 90 |
lateral plate mesoderm | 4.62e-09 | 203 |
skeletal system | 1.47e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.98e-07 | 31 |