FFCP PHASE1:Hg19::chr3:14473952..14473976,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:14473952..14473976,+ to FFCP PHASE1:Hg19::chr3:14473952..14473976,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6533 | |EntrezGene=6533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11052 | |HGNC=11052 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPV1 | |UniProt=C9JPV1 | ||
|association_with_transcript=-201bp_to_ENST00000452775_5end | |||
|cluster_id=chr3:14473952..14473976,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_SLC6A6_5end | |||
|id=chr3:14473952..14473976,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-63!140;CL:0002031!4.11e-52!124;CL:0002087!2.38e-50!119;CL:0000766!6.70e-48!76;CL:0000037!9.37e-48!172;CL:0000566!9.37e-48!172;CL:0002032!4.67e-47!165;CL:0000837!4.67e-47!165;CL:0000988!2.28e-45!182;CL:0002057!1.50e-37!42;CL:0000557!1.56e-37!71;CL:0000839!7.72e-37!70;CL:0000860!1.41e-35!45;CL:0002194!2.58e-33!63;CL:0000576!2.58e-33!63;CL:0000040!2.58e-33!63;CL:0000559!2.58e-33!63;CL:0002009!3.35e-33!65;CL:0000763!1.37e-30!112;CL:0000049!1.37e-30!112;CL:0000838!7.62e-15!52;CL:0000542!2.30e-14!53;CL:0000051!2.30e-14!53;CL:0000134!1.60e-11!358;CL:0000094!2.82e-11!8;CL:0000084!3.81e-11!25;CL:0000827!3.81e-11!25;CL:0000791!5.20e-11!18;CL:0000789!5.20e-11!18;CL:0002420!5.20e-11!18;CL:0002419!5.20e-11!18;CL:0000790!5.20e-11!18;CL:0002320!9.64e-11!365;CL:0002393!2.96e-10!9;CL:0002397!2.96e-10!9;CL:0000219!1.87e-09!390;CL:0000081!3.15e-09!11;CL:0002274!5.75e-07!5;CL:0000457!5.75e-07!5;CL:0002191!5.75e-07!5;CL:0000097!5.75e-07!5;CL:0000831!5.75e-07!5;CL:0002028!5.75e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.02e-22;8!CL:0000766;7.13e-19;69!CL:0000081;1.04e-15;11!CL:0000860;8.03e-15;33!CL:0002057;8.03e-15;33!CL:0000791;1.89e-13;18!CL:0000789;1.89e-13;18!CL:0002419;1.89e-13;18!CL:0000473;1.11e-12;39!CL:0000234;1.11e-12;39!CL:0000775;3.55e-12;3!CL:0000576;2.10e-11;48!CL:0000097;6.17e-11;5!CL:0002393;2.35e-09;6!CL:0002397;2.35e-09;6!CL:0000084;3.19e-09;25!CL:0000624;3.30e-09;6!CL:0000771;1.25e-08;2!CL:0000763;4.62e-08;100!CL:0002087;6.16e-08;104!CL:0000738;1.24e-07;136!CL:0000625;2.35e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.94e-35,72;CL:0000738,2.56e-34,136;CL:0002032,6.51e-26,161;CL:0000837,6.51e-26,161;CL:0000037,7.06e-26,168;CL:0000988,4.72e-24,177;CL:0002031,8.05e-24,120;CL:0000094,3.31e-22,8;CL:0000860,1.31e-21,42;CL:0002057,1.31e-21,42;CL:0000763,6.98e-21,108;CL:0000049,6.98e-21,108;CL:0000839,8.92e-21,66;CL:0000473,1.03e-20,48;CL:0000234,1.03e-20,48;CL:0000557,2.20e-20,67;CL:0002087,3.77e-20,115;CL:0000081,7.74e-16,11;CL:0002194,1.28e-15,59;CL:0000576,1.28e-15,59;CL:0000040,1.28e-15,59;CL:0000559,1.28e-15,59;CL:0002009,5.78e-15,61;CL:0000791,1.55e-13,18;CL:0000789,1.55e-13,18;CL:0002420,1.55e-13,18;CL:0002419,1.55e-13,18;CL:0000790,1.55e-13,18;CL:0000775,3.58e-12,3;CL:0000097,5.97e-11,5;CL:0002028,5.97e-11,5;CL:0000624,1.89e-09,6;CL:0000084,2.79e-09,25;CL:0000827,2.79e-09,25;CL:0000771,1.19e-08,2;CL:0000134,9.57e-08,354;CL:0002320,2.07e-07,361;CL:0000625,2.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.30e-18;42!CL:0000790;1.89e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-48!102;UBERON:0003061!1.26e-48!102;UBERON:0002193!2.04e-44!112;UBERON:0002371!1.55e-32!80;UBERON:0001474!4.65e-30!86;UBERON:0002405!1.17e-25!115;UBERON:0004765!1.07e-22!101;UBERON:0001434!1.07e-22!101;UBERON:0000178!4.82e-14!15;UBERON:0000179!4.82e-14!15;UBERON:0000463!4.82e-14!15;UBERON:0003081!2.29e-13!216;UBERON:0002384!4.04e-10!375;UBERON:0002204!1.65e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.77e-17;15!UBERON:0000179;4.77e-17;15!UBERON:0000463;4.77e-17;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.36e-29,98;UBERON:0003061,6.36e-29,98;UBERON:0002193,1.69e-25,108;UBERON:0002371,2.55e-17,76;UBERON:0000178,6.94e-17,15;UBERON:0000179,6.94e-17,15;UBERON:0000463,6.94e-17,15;UBERON:0001474,1.19e-15,82;UBERON:0002405,1.50e-14,93;UBERON:0004765,8.96e-14,90;UBERON:0001434,7.41e-12,100;UBERON:0003081,7.10e-10,203;UBERON:0002384,5.88e-07,371 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.328402357799783,0.393553906568396,3.54027849164014,0.767658796194425,1.70297735647684,0,0,0,0.154934401160603,0,0,2.21598163412751,1.80490002723128,2.17010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.755751887377619,0.485168122375632,0.232429036905685,1.6446715520873,0.309706370895104,0.575384784644301,1.0246428261164,0.47296445977717,2.75796544589295,1.29096936716765,4.06279459783025,1.12945403725563,0.545812300115692,0.898893937780338,0.306083892370903,1.28371610830437,1.27867425159808,0.329851300186716,1.79517291859469,0.426224750532694,2.61188314765726,0.56738522469114,1.86846674698672,0.75374599577023,2.08593167368081,0.868755378820466,0.605399502633369,1.10483290796269,1.58231193720442,0.633765858935825,0.850417199860174,1.04829322754188,0,0,0.48217676009124,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,1.68152568894461,0,1.7703879310245,1.57204305099666,3.08402248499264,1.33749196312542,0,0,0,1.6711568532776,0.294605907474837,0.443067789167242,1.08321545506006,2.30564375506215,2.21100890851793,0.493313713811028,0.276350017785848,0,0,0,0,0.679856056185397,1.53288197440768,1.03088233644789,1.01207876807801,0.637130828648193,0,0,0.451725357233318,0.639933055772092,2.49861453104692,1.4206635122641,0,1.00803371612366,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,1.32072651019839,2.07328115540772,1.72943944100354,1.13618190083742,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0.985153801009636,3.23441362289276,2.18183161675572,0,0,0,0,0,6.74106321552464,8.97484377612075,14.9189584836973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,4.5571774973933,1.19115887728894,1.23408681925858,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.614321404198464,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.369254416383208,0,0,0,0,0,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.177404740325278,0.460935950223117,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.328402357799783,0.393553906568396,3.54027849164014,0.767658796194425,1.70297735647684,0,0,0,0.154934401160603,0,0,2.21598163412751,1.80490002723128,2.17010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.755751887377619,0.485168122375632,0.232429036905685,1.6446715520873,0.309706370895104,0.575384784644301,1.0246428261164,0.47296445977717,2.75796544589295,1.29096936716765,4.06279459783025,1.12945403725563,0.545812300115692,0.898893937780338,0.306083892370903,1.28371610830437,1.27867425159808,0.329851300186716,1.79517291859469,0.426224750532694,2.61188314765726,0.56738522469114,1.86846674698672,0.75374599577023,2.08593167368081,0.868755378820466,0.605399502633369,1.10483290796269,1.58231193720442,0.633765858935825,0.850417199860174,1.04829322754188,0,0,0.48217676009124,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,2.64342657158052,1.68152568894461,0,1.7703879310245,1.57204305099666,3.08402248499264,1.33749196312542,0,0,0,1.6711568532776,0.294605907474837,0.443067789167242,1.08321545506006,2.30564375506215,2.21100890851793,0.493313713811028,0.276350017785848,0,0,0,0,0.679856056185397,1.53288197440768,1.03088233644789,1.01207876807801,0.637130828648193,0,0,0.451725357233318,0.639933055772092,2.49861453104692,1.4206635122641,0,1.00803371612366,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,1.32072651019839,2.07328115540772,1.72943944100354,1.13618190083742,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.448340575974109,0.985153801009636,3.23441362289276,2.18183161675572,0,0,0,0,0,6.74106321552464,8.97484377612075,14.9189584836973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,4.5571774973933,1.19115887728894,1.23408681925858,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.614321404198464,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.369254416383208,0,0,0,0,0,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.177404740325278,0.460935950223117,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | ||
|short_description=p7@SLC6A6 | |||
}} | }} |
Latest revision as of 05:50, 25 September 2015
Short description: | p7@SLC6A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC6A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -201bp_to_ENST00000452775_5end |
EntrezGene: | SLC6A6 |
HGNC: | 11052 |
UniProt: | C9JPV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.36e-29 | 98 |
blood island | 6.36e-29 | 98 |
hemolymphoid system | 1.69e-25 | 108 |
bone marrow | 2.55e-17 | 76 |
blood | 6.94e-17 | 15 |
haemolymphatic fluid | 6.94e-17 | 15 |
organism substance | 6.94e-17 | 15 |
bone element | 1.19e-15 | 82 |
immune system | 1.50e-14 | 93 |
skeletal element | 8.96e-14 | 90 |
skeletal system | 7.41e-12 | 100 |
lateral plate mesoderm | 7.10e-10 | 203 |
connective tissue | 5.88e-07 | 371 |