FFCP PHASE1:Hg19::chr4:83822199..83822239,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:83822199..83822239,+ to FFCP PHASE1:Hg19::chr4:83822199..83822239,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79725 | |EntrezGene=79725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=23192 | |HGNC=23192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_BX648134_5end | |||
|cluster_id=chr4:83822199..83822239,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_THAP9_5end | |||
|id=chr4:83822199..83822239,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.80e-33!140;CL:0000037!1.68e-28!172;CL:0000566!1.68e-28!172;CL:0002057!1.56e-26!42;CL:0000860!3.52e-26!45;CL:0002031!6.66e-26!124;CL:0002032!2.30e-25!165;CL:0000837!2.30e-25!165;CL:0000988!2.65e-25!182;CL:0002087!1.61e-23!119;CL:0000766!6.26e-23!76;CL:0000839!1.52e-18!70;CL:0000557!2.95e-18!71;CL:0000763!4.50e-18!112;CL:0000049!4.50e-18!112;CL:0002009!8.31e-17!65;CL:0002194!8.96e-16!63;CL:0000576!8.96e-16!63;CL:0000040!8.96e-16!63;CL:0000559!8.96e-16!63;CL:0000134!2.54e-11!358;CL:0002320!3.00e-11!365;CL:0000219!5.02e-10!390;CL:0002393!2.73e-07!9;CL:0002397!2.73e-07!9;CL:0000838!3.14e-07!52;CL:0000094!3.62e-07!8;CL:0000542!3.91e-07!53;CL:0000051!3.91e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-46;33!CL:0002057;1.20e-46;33!CL:0000576;1.40e-35;48!CL:0000473;9.68e-32;39!CL:0000234;9.68e-32;39!CL:0000766;4.72e-29;69!CL:0000094;6.25e-16;8!CL:0002087;1.16e-15;104!CL:0000738;8.75e-13;136!CL:0000763;2.54e-12;100!CL:0002393;6.80e-12;6!CL:0002397;6.80e-12;6!CL:0000081;4.78e-11;11!CL:0000624;7.84e-09;6!CL:0000988;1.36e-08;177!CL:0000791;1.81e-08;18!CL:0000789;1.81e-08;18!CL:0002419;1.81e-08;18!CL:0000219;9.00e-08;193!CL:0000767;5.64e-07;3!CL:0000775;7.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-67,42;CL:0002057,2.12e-67,42;CL:0000738,1.92e-65,136;CL:0000766,1.69e-63,72;CL:0000473,3.49e-57,48;CL:0000234,3.49e-57,48;CL:0002031,3.26e-52,120;CL:0000557,1.09e-51,67;CL:0000037,1.24e-51,168;CL:0000839,4.00e-50,66;CL:0002087,4.36e-48,115;CL:0002009,5.17e-48,61;CL:0000988,8.05e-48,177;CL:0002032,1.27e-46,161;CL:0000837,1.27e-46,161;CL:0002194,3.54e-45,59;CL:0000576,3.54e-45,59;CL:0000040,3.54e-45,59;CL:0000559,3.54e-45,59;CL:0000763,1.15e-41,108;CL:0000049,1.15e-41,108;CL:0000134,2.51e-21,354;CL:0002320,1.96e-20,361;CL:0000219,2.65e-17,386;CL:0002393,3.10e-16,9;CL:0002397,3.10e-16,9;CL:0000094,6.34e-16,8;CL:0000034,2.98e-14,441;CL:0000048,3.82e-14,427;CL:0000723,1.29e-13,433;CL:0000081,4.83e-11,11;CL:0000624,4.25e-09,6;CL:0000791,1.20e-08,18;CL:0000789,1.20e-08,18;CL:0002420,1.20e-08,18;CL:0002419,1.20e-08,18;CL:0000790,1.20e-08,18;CL:0000767,5.72e-07,3;CL:0000775,7.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.02e-47;42!CL:0000049;4.27e-11;108!CL:0000790;1.81e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-19!102;UBERON:0003061!1.86e-19!102;UBERON:0002193!1.45e-16!112;UBERON:0002371!5.51e-16!80;UBERON:0001474!1.76e-14!86;UBERON:0004765!5.39e-12!101;UBERON:0001434!5.39e-12!101;UBERON:0002384!2.67e-11!375;UBERON:0002405!7.56e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-49,98;UBERON:0003061,1.04e-49,98;UBERON:0002371,1.21e-47,76;UBERON:0002193,1.98e-43,108;UBERON:0001474,5.19e-43,82;UBERON:0002405,2.16e-39,93;UBERON:0004765,8.41e-38,90;UBERON:0001434,1.80e-32,100;UBERON:0002384,3.22e-19,371;UBERON:0003081,6.28e-19,203;UBERON:0002204,2.25e-14,167;UBERON:0000926,1.11e-08,315;UBERON:0004120,1.11e-08,315;UBERON:0006603,1.11e-08,315 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.495065411840187,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.305653622991805,0.164201178899891,0.236132343941038,36.976242023797,20.7267874972495,22.448337880831,0,0.30120591877825,0,0.619737604642413,0.284338464974843,1.76160263600908,55.3995408531877,42.9165117586103,38.8449458581375,0.447830948479849,0,0.257575567634187,1.59938062657521,0,1.94067248950253,6.50801303335917,9.45686142450199,18.8920886246013,15.8230815777183,10.5025889676931,27.1954564371873,74.4650670391096,47.7658665852031,70.4217730290577,4.1413314699373,5.73102915121476,8.98893937780339,82.3365670477728,83.1206180127082,74.8024437184878,1.64925650093358,1.99463657621632,3.40979800426155,16.5419266018293,14.7520158419696,13.7020894779026,13.0649305933506,10.429658368404,23.2392063834475,7.87019353423379,19.5187147073409,22.4688295083028,6.5489138756702,7.65375479874157,8.80566311135179,4.26848798356681,5.55654503513573,1.76798145366788,4.27519115611873,3.38158351238453,3.47061892152804,0,0,1.77901850772711,2.98711155796555,0.400395987036012,1.14950487990897,0.661044872784862,0,0.569212969109448,3.52342313622563,1.91136614062614,6.60856642895129,7.8471198817415,0,1.96709770113833,1.17903228824749,1.85041349099558,0.167186495390678,1.95553359980154,0,0,0.668462741311041,1.17842362989935,0.221533894583621,0.812411591295047,0,0.260118695119756,0,0.276350017785848,0,2.96573126324121,0.802622484269139,2.09071047609954,1.0197840842781,2.68254345521345,0.34362744548263,1.26509846009751,1.27426165729639,0,0.950452044448374,0.903450714466637,0.383959833463255,2.49861453104692,0.710331756132051,0,3.62892137804518,4.01160293675261,1.73789284659359,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0,1.89919659471683,0,0,0.324547393654683,0,0,1.90792499444274,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,84.3394671590805,100.822868678565,0,0.496971951695318,0.12663051166458,0.794455084879313,0.286836620748814,0,0,0,0,0.622422070799533,0.538842688278752,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.298897361103602,0,0,0.421352420106746,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.89694817844431,0,0,0.900273288253207,0.206105058476878,0.515281080091258,0,0.506328996723799,0.194874010322397,0.757301322732344,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0,0.445893486866185,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0,6.40462209264727,0.352193736052904,2.90259361757081,2.45003920808834,3.02981840223312,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.448340575974109,10.4426302907021,5.17506179662842,8.98401253958239,0.254094624222463,0,0,0.167516265334349,0,14.9801404789436,11.966458368161,29.4235014539585,0.24538298343828,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,5.78950473144085,9.05999643438191,8.75165973988244,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,2.96836132889982,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.8300481571743,0.256450125116389,0.328014645699706,0,0.721287081534056,0.183138929636687,0.495056999523528,1.14853107599234,0,0,0,0.154048617114644,0,0.275673144969061,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.589062011728432,0,0,0,0,0.243713489631284,0,0.272999822815972,0,2.26016233240486,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0.7133421029625,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.282431402330337,0,0,0,0.459446800413919,2.02979043692868,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,5.18778648954174,2.16012574895246,0,0,0,0.245040215981032,0.185803175125719,0.432807638929335,0.426851060090485,0.159426272728822,0.199579371432817,0.5745161103971,0.423347165447766,0,0,0.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| ||
|short_description=p2@THAP9 | |||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p2@THAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THAP9_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 32bp_to_BX648134_5end |
EntrezGene: | THAP9 |
HGNC: | 23192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-49 | 98 |
blood island | 1.04e-49 | 98 |
bone marrow | 1.21e-47 | 76 |
hemolymphoid system | 1.98e-43 | 108 |
bone element | 5.19e-43 | 82 |
immune system | 2.16e-39 | 93 |
skeletal element | 8.41e-38 | 90 |
skeletal system | 1.80e-32 | 100 |
connective tissue | 3.22e-19 | 371 |
lateral plate mesoderm | 6.28e-19 | 203 |
musculoskeletal system | 2.25e-14 | 167 |
mesoderm | 1.11e-08 | 315 |
mesoderm-derived structure | 1.11e-08 | 315 |
presumptive mesoderm | 1.11e-08 | 315 |