FF:11873-125C1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005767 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008133;DRR009005;DRZ000430;DRZ001815;DRZ011780;DRZ013165 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000343,FF:0000350,FF:0011101 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure=FF:0000343,FF:0011101,FF:11873-125C1 | |fonse_treatment_closure=FF:0000343,FF:0011101,FF:11873-125C1 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor2.CNhs13484.11873-125C1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor2.CNhs13484.11873-125C1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor2.CNhs13484.11873-125C1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor2.CNhs13484.11873-125C1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor2.CNhs13484.11873-125C1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11873-125C1 | |id=FF:11873-125C1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011101 | ||
|is_obsolete= | |||
|library_id=CNhs13484 | |||
|library_id_phase_based=2:CNhs13484 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11873 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11873 | |||
|name=CD14+ monocytes - mock treated, donor2 | |name=CD14+ monocytes - mock treated, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13484,LSID1025,release012,COMPLETED | |profile_hcage=CNhs13484,LSID1025,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=3.032505 | |rna_weight_ug=3.032505 | ||
|sample_age=51 | |sample_age=51 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.9826971375396e-250!GO:0005737;cytoplasm;3.97983679094491e-133!GO:0043227;membrane-bound organelle;2.3604842450808e-130!GO:0043231;intracellular membrane-bound organelle;5.90134248855424e-130!GO:0043226;organelle;1.10945698705546e-122!GO:0043229;intracellular organelle;8.85991556479576e-122!GO:0044444;cytoplasmic part;2.0866113378919e-87!GO:0044422;organelle part;3.18911640465869e-75!GO:0044446;intracellular organelle part;1.37800283988729e-73!GO:0044237;cellular metabolic process;7.25616778354739e-72!GO:0044238;primary metabolic process;1.75789888742342e-70!GO:0043170;macromolecule metabolic process;3.00740221659246e-70!GO:0005515;protein binding;2.29014344815133e-69!GO:0032991;macromolecular complex;2.15382743139155e-62!GO:0003723;RNA binding;2.8943717137997e-58!GO:0030529;ribonucleoprotein complex;1.07932680929835e-55!GO:0005634;nucleus;4.61813614898499e-55!GO:0044428;nuclear part;4.01254216932754e-51!GO:0019538;protein metabolic process;4.93994247511225e-49!GO:0044267;cellular protein metabolic process;7.93025519567913e-46!GO:0044260;cellular macromolecule metabolic process;1.61386309914715e-45!GO:0033036;macromolecule localization;3.59705077701982e-44!GO:0006412;translation;1.19786436161322e-43!GO:0015031;protein transport;5.64466110836187e-43!GO:0045184;establishment of protein localization;1.17068603752142e-42!GO:0043233;organelle lumen;1.10374285536859e-41!GO:0031974;membrane-enclosed lumen;1.10374285536859e-41!GO:0008104;protein localization;8.52001506588414e-41!GO:0043283;biopolymer metabolic process;2.75296768915075e-39!GO:0010467;gene expression;6.63958696440339e-39!GO:0005829;cytosol;2.12858571406099e-35!GO:0006396;RNA processing;1.46914459714135e-34!GO:0031090;organelle membrane;1.98680241975148e-34!GO:0016071;mRNA metabolic process;2.01124977406862e-33!GO:0009059;macromolecule biosynthetic process;4.25712579629212e-33!GO:0031981;nuclear lumen;1.72673898447202e-32!GO:0043234;protein complex;1.02480319074743e-30!GO:0044249;cellular biosynthetic process;1.9667590456749e-30!GO:0008380;RNA splicing;6.86256988028172e-30!GO:0005840;ribosome;6.86256988028172e-30!GO:0009058;biosynthetic process;8.03652901379773e-30!GO:0046907;intracellular transport;2.0993843575697e-29!GO:0006886;intracellular protein transport;3.19982657245285e-29!GO:0005739;mitochondrion;5.03380434739954e-29!GO:0016043;cellular component organization and biogenesis;5.81822700701939e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.09315048912641e-28!GO:0006397;mRNA processing;1.19842225802631e-28!GO:0006915;apoptosis;4.59337818596193e-28!GO:0012501;programmed cell death;4.70347277685798e-28!GO:0003735;structural constituent of ribosome;4.45494897923232e-27!GO:0008219;cell death;1.07147814646169e-26!GO:0016265;death;1.07147814646169e-26!GO:0031967;organelle envelope;2.55055227932487e-25!GO:0031975;envelope;3.62911969741195e-25!GO:0033279;ribosomal subunit;4.2322357179073e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.75986370325496e-24!GO:0051649;establishment of cellular localization;8.72264478188243e-23!GO:0005654;nucleoplasm;1.70861001619611e-22!GO:0065003;macromolecular complex assembly;2.88443146294723e-22!GO:0051641;cellular localization;3.88429815287431e-22!GO:0044445;cytosolic part;1.11303558248963e-21!GO:0005681;spliceosome;2.90888076203599e-21!GO:0008134;transcription factor binding;7.01477681064739e-21!GO:0044429;mitochondrial part;1.22099510395857e-20!GO:0000166;nucleotide binding;2.17318613984415e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.83445781984877e-20!GO:0044451;nucleoplasm part;5.04232648795731e-19!GO:0022607;cellular component assembly;1.75648004694431e-18!GO:0016192;vesicle-mediated transport;2.76991849051291e-18!GO:0042981;regulation of apoptosis;3.04431985569255e-18!GO:0043067;regulation of programmed cell death;5.89143664712245e-18!GO:0003676;nucleic acid binding;7.20081210671732e-18!GO:0048770;pigment granule;9.99860179596562e-18!GO:0042470;melanosome;9.99860179596562e-18!GO:0016070;RNA metabolic process;1.18624298081601e-17!GO:0006119;oxidative phosphorylation;2.7159795782147e-17!GO:0044265;cellular macromolecule catabolic process;5.07085334610892e-17!GO:0043412;biopolymer modification;1.05786677475505e-16!GO:0022618;protein-RNA complex assembly;1.24625251373473e-16!GO:0007243;protein kinase cascade;2.02864445918274e-16!GO:0006512;ubiquitin cycle;3.03499026558309e-16!GO:0005740;mitochondrial envelope;7.41726897836066e-16!GO:0006464;protein modification process;2.04330361407923e-15!GO:0031966;mitochondrial membrane;2.69590447868303e-15!GO:0005773;vacuole;5.140441001523e-15!GO:0043285;biopolymer catabolic process;6.57526605962607e-15!GO:0019866;organelle inner membrane;7.84774103336126e-15!GO:0006996;organelle organization and biogenesis;8.30535186935679e-15!GO:0016604;nuclear body;1.08227239064517e-14!GO:0043687;post-translational protein modification;1.71116153333875e-14!GO:0032553;ribonucleotide binding;2.15817481292504e-14!GO:0032555;purine ribonucleotide binding;2.15817481292504e-14!GO:0048523;negative regulation of cellular process;2.23079485738213e-14!GO:0050794;regulation of cellular process;2.82979559341106e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.35901806362272e-14!GO:0019941;modification-dependent protein catabolic process;4.45083580066502e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.45083580066502e-14!GO:0006511;ubiquitin-dependent protein catabolic process;4.65087275280978e-14!GO:0006605;protein targeting;4.72510757191845e-14!GO:0016874;ligase activity;5.06622956956637e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;5.40336449418249e-14!GO:0044257;cellular protein catabolic process;5.43175865297551e-14!GO:0009057;macromolecule catabolic process;6.25020158079434e-14!GO:0017076;purine nucleotide binding;9.4165058122855e-14!GO:0017111;nucleoside-triphosphatase activity;1.20707558132336e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.38571570551736e-13!GO:0000323;lytic vacuole;1.4474689260341e-13!GO:0005764;lysosome;1.4474689260341e-13!GO:0016462;pyrophosphatase activity;1.44964037386201e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.71631127735111e-13!GO:0015934;large ribosomal subunit;2.023850834088e-13!GO:0007242;intracellular signaling cascade;2.50561085103093e-13!GO:0003712;transcription cofactor activity;2.50700105616042e-13!GO:0008135;translation factor activity, nucleic acid binding;2.61555227476568e-13!GO:0005768;endosome;3.15960972162084e-13!GO:0006913;nucleocytoplasmic transport;4.09765159722241e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.52975491576507e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.83206017465494e-13!GO:0051169;nuclear transport;8.05331723303499e-13!GO:0016607;nuclear speck;9.18465047636398e-13!GO:0005794;Golgi apparatus;1.03383551023748e-12!GO:0012505;endomembrane system;1.2774362317451e-12!GO:0048519;negative regulation of biological process;1.43248733899921e-12!GO:0044248;cellular catabolic process;1.53100407050981e-12!GO:0015935;small ribosomal subunit;1.58851492265645e-12!GO:0006457;protein folding;2.28507397639536e-12!GO:0005743;mitochondrial inner membrane;2.47000062633898e-12!GO:0000502;proteasome complex (sensu Eukaryota);3.64357549645982e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.25626935323865e-12!GO:0003743;translation initiation factor activity;4.51538695754868e-12!GO:0051246;regulation of protein metabolic process;4.72867241689872e-12!GO:0043069;negative regulation of programmed cell death;4.86261589742012e-12!GO:0043066;negative regulation of apoptosis;6.03374913369835e-12!GO:0030163;protein catabolic process;7.81587412324089e-12!GO:0006259;DNA metabolic process;7.99700805997505e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.07883370829478e-11!GO:0044455;mitochondrial membrane part;1.11774349770739e-11!GO:0006413;translational initiation;1.52917048886734e-11!GO:0006793;phosphorus metabolic process;1.52917048886734e-11!GO:0006796;phosphate metabolic process;1.52917048886734e-11!GO:0065009;regulation of a molecular function;1.67007481287707e-11!GO:0006366;transcription from RNA polymerase II promoter;1.81643622602714e-11!GO:0050789;regulation of biological process;3.86215748926496e-11!GO:0051186;cofactor metabolic process;5.37927194793863e-11!GO:0006446;regulation of translational initiation;5.9378093096402e-11!GO:0005524;ATP binding;8.23411636883683e-11!GO:0032559;adenyl ribonucleotide binding;1.60967883278345e-10!GO:0005730;nucleolus;2.94131134178522e-10!GO:0016310;phosphorylation;3.26895357000759e-10!GO:0051082;unfolded protein binding;5.04791819950045e-10!GO:0006916;anti-apoptosis;7.34405423489549e-10!GO:0030554;adenyl nucleotide binding;7.59657799135805e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;9.50682517112993e-10!GO:0000375;RNA splicing, via transesterification reactions;9.50682517112993e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.50682517112993e-10!GO:0005635;nuclear envelope;1.0684898369909e-09!GO:0006732;coenzyme metabolic process;1.13866799156528e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.13866799156528e-09!GO:0031324;negative regulation of cellular metabolic process;1.15745700354493e-09!GO:0005746;mitochondrial respiratory chain;1.22392490572648e-09!GO:0065007;biological regulation;1.57465203435677e-09!GO:0048193;Golgi vesicle transport;1.81014864599412e-09!GO:0019829;cation-transporting ATPase activity;2.55786935767062e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.91888406397112e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.22806405572947e-09!GO:0006950;response to stress;4.24310824784961e-09!GO:0005770;late endosome;4.27984476127727e-09!GO:0015986;ATP synthesis coupled proton transport;6.29298813584366e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.29298813584366e-09!GO:0008639;small protein conjugating enzyme activity;6.92164786035056e-09!GO:0043228;non-membrane-bound organelle;7.08999694740177e-09!GO:0043232;intracellular non-membrane-bound organelle;7.08999694740177e-09!GO:0050136;NADH dehydrogenase (quinone) activity;7.08999694740177e-09!GO:0003954;NADH dehydrogenase activity;7.08999694740177e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.08999694740177e-09!GO:0016564;transcription repressor activity;7.13258619288403e-09!GO:0002376;immune system process;7.73646224006628e-09!GO:0005783;endoplasmic reticulum;8.5400573674922e-09!GO:0006417;regulation of translation;1.03776848005366e-08!GO:0019222;regulation of metabolic process;1.19264904853746e-08!GO:0016787;hydrolase activity;1.27519548489427e-08!GO:0031965;nuclear membrane;1.31357878040981e-08!GO:0019787;small conjugating protein ligase activity;1.45951732685366e-08!GO:0004842;ubiquitin-protein ligase activity;1.50997492958791e-08!GO:0008047;enzyme activator activity;1.51155580847073e-08!GO:0017038;protein import;1.58359958029904e-08!GO:0048522;positive regulation of cellular process;2.04019939951098e-08!GO:0009967;positive regulation of signal transduction;2.3445419974271e-08!GO:0044440;endosomal part;2.93210884829035e-08!GO:0010008;endosome membrane;2.93210884829035e-08!GO:0003713;transcription coactivator activity;3.03153529391217e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.06732315822244e-08!GO:0009150;purine ribonucleotide metabolic process;3.22032322475675e-08!GO:0016481;negative regulation of transcription;3.45677489669338e-08!GO:0008565;protein transporter activity;3.58578770047174e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.71225190100222e-08!GO:0006163;purine nucleotide metabolic process;3.75000078176496e-08!GO:0006164;purine nucleotide biosynthetic process;3.94380531983544e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.21401155670936e-08!GO:0050790;regulation of catalytic activity;4.22562944110016e-08!GO:0009892;negative regulation of metabolic process;4.25712012874137e-08!GO:0009056;catabolic process;6.44192811759204e-08!GO:0006754;ATP biosynthetic process;6.44192811759204e-08!GO:0006753;nucleoside phosphate metabolic process;6.44192811759204e-08!GO:0042775;organelle ATP synthesis coupled electron transport;6.48150293717482e-08!GO:0042773;ATP synthesis coupled electron transport;6.48150293717482e-08!GO:0005774;vacuolar membrane;6.5115023016019e-08!GO:0048518;positive regulation of biological process;6.57799872664063e-08!GO:0009259;ribonucleotide metabolic process;7.22296263332919e-08!GO:0051170;nuclear import;7.2630707762132e-08!GO:0044453;nuclear membrane part;8.11256363964635e-08!GO:0016469;proton-transporting two-sector ATPase complex;8.42659456079044e-08!GO:0042623;ATPase activity, coupled;9.37067730670323e-08!GO:0016887;ATPase activity;1.19192407197732e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.27814398688203e-07!GO:0045271;respiratory chain complex I;1.27814398688203e-07!GO:0005747;mitochondrial respiratory chain complex I;1.27814398688203e-07!GO:0009260;ribonucleotide biosynthetic process;1.4265412410439e-07!GO:0019899;enzyme binding;1.42876044952775e-07!GO:0006606;protein import into nucleus;1.46062619295708e-07!GO:0016881;acid-amino acid ligase activity;1.60003264108966e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.71672790841491e-07!GO:0043065;positive regulation of apoptosis;1.78002949994633e-07!GO:0031326;regulation of cellular biosynthetic process;2.010597245323e-07!GO:0051188;cofactor biosynthetic process;2.15284834172497e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.45513240679303e-07!GO:0043068;positive regulation of programmed cell death;2.49176831622062e-07!GO:0009889;regulation of biosynthetic process;2.54479101907783e-07!GO:0006461;protein complex assembly;2.8672186327373e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.8672186327373e-07!GO:0044437;vacuolar part;3.19275028451771e-07!GO:0007049;cell cycle;3.19275028451771e-07!GO:0007264;small GTPase mediated signal transduction;3.34772624182238e-07!GO:0046034;ATP metabolic process;3.43271231769928e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.88703232781174e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.88703232781174e-07!GO:0016568;chromatin modification;3.88703232781174e-07!GO:0050657;nucleic acid transport;4.02061397453652e-07!GO:0051236;establishment of RNA localization;4.02061397453652e-07!GO:0050658;RNA transport;4.02061397453652e-07!GO:0009108;coenzyme biosynthetic process;4.31807454350829e-07!GO:0005765;lysosomal membrane;4.67214832161759e-07!GO:0006403;RNA localization;5.05555489658258e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.05555489658258e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.05555489658258e-07!GO:0005793;ER-Golgi intermediate compartment;5.76898066731687e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;5.80027004530361e-07!GO:0016563;transcription activator activity;6.1938460385541e-07!GO:0044432;endoplasmic reticulum part;6.29117298957141e-07!GO:0051726;regulation of cell cycle;6.74843373528946e-07!GO:0000074;regulation of progression through cell cycle;9.26185804775224e-07!GO:0009615;response to virus;9.39974242693631e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.66813024614258e-07!GO:0009144;purine nucleoside triphosphate metabolic process;9.66813024614258e-07!GO:0031980;mitochondrial lumen;9.88923079682624e-07!GO:0005759;mitochondrial matrix;9.88923079682624e-07!GO:0009055;electron carrier activity;1.08347239604586e-06!GO:0031982;vesicle;1.09237639301778e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.18724565952211e-06!GO:0009966;regulation of signal transduction;1.23359069586427e-06!GO:0031323;regulation of cellular metabolic process;1.2883719739347e-06!GO:0032446;protein modification by small protein conjugation;1.48652834538804e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.5675988465612e-06!GO:0006323;DNA packaging;1.7582646517814e-06!GO:0006752;group transfer coenzyme metabolic process;1.87455508234155e-06!GO:0006955;immune response;1.87455508234155e-06!GO:0048468;cell development;1.87657245171925e-06!GO:0045786;negative regulation of progression through cell cycle;1.94198636418373e-06!GO:0016044;membrane organization and biogenesis;2.17754001539543e-06!GO:0006917;induction of apoptosis;2.31666076893789e-06!GO:0005643;nuclear pore;2.54759998069879e-06!GO:0009141;nucleoside triphosphate metabolic process;2.75097226810636e-06!GO:0003924;GTPase activity;2.76271227016603e-06!GO:0005525;GTP binding;2.8845277134739e-06!GO:0016567;protein ubiquitination;2.90628226816103e-06!GO:0003714;transcription corepressor activity;3.01921927351439e-06!GO:0005096;GTPase activator activity;3.34877165431017e-06!GO:0012502;induction of programmed cell death;3.63528765723086e-06!GO:0006974;response to DNA damage stimulus;3.81403119582092e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.94023994799948e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.62065603644727e-06!GO:0030695;GTPase regulator activity;5.62499129547923e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.73780522376874e-06!GO:0051028;mRNA transport;6.23429108096134e-06!GO:0031252;leading edge;6.51867006735126e-06!GO:0004386;helicase activity;6.51867006735126e-06!GO:0008026;ATP-dependent helicase activity;7.03520569228588e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.03532144647719e-06!GO:0031410;cytoplasmic vesicle;8.56146217519788e-06!GO:0048475;coated membrane;8.80957623600502e-06!GO:0030117;membrane coat;8.80957623600502e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.92634375366575e-06!GO:0016197;endosome transport;8.94031149546438e-06!GO:0005839;proteasome core complex (sensu Eukaryota);9.11545553344087e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.32571088639603e-06!GO:0005769;early endosome;1.1104036880509e-05!GO:0043566;structure-specific DNA binding;1.17607279369034e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.25892084647594e-05!GO:0005789;endoplasmic reticulum membrane;1.45374164030551e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.46474945629101e-05!GO:0015399;primary active transmembrane transporter activity;1.46474945629101e-05!GO:0031988;membrane-bound vesicle;1.71902626345635e-05!GO:0046930;pore complex;1.99134402915156e-05!GO:0010468;regulation of gene expression;2.06964259522254e-05!GO:0009607;response to biotic stimulus;2.15010079660146e-05!GO:0031902;late endosome membrane;2.35801962525774e-05!GO:0042254;ribosome biogenesis and assembly;2.56791734387252e-05!GO:0003724;RNA helicase activity;2.57797544131621e-05!GO:0030120;vesicle coat;3.08483939540237e-05!GO:0030662;coated vesicle membrane;3.08483939540237e-05!GO:0045892;negative regulation of transcription, DNA-dependent;3.29862625127551e-05!GO:0006401;RNA catabolic process;3.81513282707236e-05!GO:0045259;proton-transporting ATP synthase complex;4.23001444742243e-05!GO:0032561;guanyl ribonucleotide binding;4.30961619819066e-05!GO:0019001;guanyl nucleotide binding;4.30961619819066e-05!GO:0051276;chromosome organization and biogenesis;4.55794434865393e-05!GO:0004298;threonine endopeptidase activity;4.67739522116801e-05!GO:0065002;intracellular protein transport across a membrane;4.93466952294342e-05!GO:0051427;hormone receptor binding;4.9790337559315e-05!GO:0051168;nuclear export;5.58980387445273e-05!GO:0006897;endocytosis;6.46389478322994e-05!GO:0010324;membrane invagination;6.46389478322994e-05!GO:0016023;cytoplasmic membrane-bound vesicle;6.4789826992367e-05!GO:0006613;cotranslational protein targeting to membrane;6.526193114013e-05!GO:0006281;DNA repair;6.8018052289241e-05!GO:0004674;protein serine/threonine kinase activity;7.09025902554204e-05!GO:0030532;small nuclear ribonucleoprotein complex;7.37675945123201e-05!GO:0003697;single-stranded DNA binding;7.57466565875852e-05!GO:0005083;small GTPase regulator activity;8.66901764798657e-05!GO:0035257;nuclear hormone receptor binding;8.66901764798657e-05!GO:0051336;regulation of hydrolase activity;8.66901764798657e-05!GO:0000245;spliceosome assembly;9.08167554384837e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000113790999968585!GO:0007265;Ras protein signal transduction;0.000113790999968585!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000141866732833795!GO:0009060;aerobic respiration;0.000142292769395797!GO:0008632;apoptotic program;0.000156512874148753!GO:0006399;tRNA metabolic process;0.000160042363258522!GO:0046822;regulation of nucleocytoplasmic transport;0.000160465411908296!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000160465411908296!GO:0004812;aminoacyl-tRNA ligase activity;0.000160465411908296!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000160465411908296!GO:0043492;ATPase activity, coupled to movement of substances;0.000165517409059331!GO:0030036;actin cytoskeleton organization and biogenesis;0.000168664464636341!GO:0005057;receptor signaling protein activity;0.000170340331289736!GO:0005761;mitochondrial ribosome;0.000182233239997834!GO:0000313;organellar ribosome;0.000182233239997834!GO:0022402;cell cycle process;0.000187859719399146!GO:0044431;Golgi apparatus part;0.000191775823975509!GO:0006818;hydrogen transport;0.000193361313507186!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000194683595841182!GO:0006350;transcription;0.000199535719818395!GO:0001816;cytokine production;0.000216923681344107!GO:0005885;Arp2/3 protein complex;0.000224599959975592!GO:0006402;mRNA catabolic process;0.000232148227026498!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000232529496506044!GO:0016740;transferase activity;0.00023897971551385!GO:0005798;Golgi-associated vesicle;0.000252757466938554!GO:0000151;ubiquitin ligase complex;0.000254069549167223!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000263387809445431!GO:0043038;amino acid activation;0.00026799597445753!GO:0006418;tRNA aminoacylation for protein translation;0.00026799597445753!GO:0043039;tRNA aminoacylation;0.00026799597445753!GO:0032940;secretion by cell;0.000274175517023541!GO:0022890;inorganic cation transmembrane transporter activity;0.000300682385434949!GO:0008186;RNA-dependent ATPase activity;0.000319313328499422!GO:0015992;proton transport;0.000338487460664467!GO:0007040;lysosome organization and biogenesis;0.000349124083028057!GO:0009893;positive regulation of metabolic process;0.000353240284951506!GO:0001726;ruffle;0.000356599417669608!GO:0046519;sphingoid metabolic process;0.000362871590667885!GO:0045333;cellular respiration;0.000364309045333581!GO:0003729;mRNA binding;0.000433951511648576!GO:0051789;response to protein stimulus;0.000458531368212375!GO:0006986;response to unfolded protein;0.000458531368212375!GO:0009719;response to endogenous stimulus;0.000463035165835536!GO:0007034;vacuolar transport;0.00051274150860836!GO:0005667;transcription factor complex;0.000517227178624753!GO:0051223;regulation of protein transport;0.000526591619674849!GO:0002757;immune response-activating signal transduction;0.000536793682055958!GO:0006672;ceramide metabolic process;0.000613866007858158!GO:0007050;cell cycle arrest;0.000623907040529479!GO:0006612;protein targeting to membrane;0.000683260754664554!GO:0008234;cysteine-type peptidase activity;0.000709381418327998!GO:0007033;vacuole organization and biogenesis;0.000730850326495235!GO:0009117;nucleotide metabolic process;0.000794797584718174!GO:0051338;regulation of transferase activity;0.000826798744403002!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000840444101978035!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000862418010068141!GO:0043623;cellular protein complex assembly;0.000869753855849135!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000887155489959616!GO:0004004;ATP-dependent RNA helicase activity;0.000941893002977698!GO:0007005;mitochondrion organization and biogenesis;0.000948750722082595!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000978547494880418!GO:0002764;immune response-regulating signal transduction;0.00099796298650592!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00102267418597244!GO:0008654;phospholipid biosynthetic process;0.00107662458051579!GO:0005637;nuclear inner membrane;0.00109915984416214!GO:0033157;regulation of intracellular protein transport;0.00115740443439678!GO:0042306;regulation of protein import into nucleus;0.00115740443439678!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00119503179973263!GO:0005099;Ras GTPase activator activity;0.00119678781097321!GO:0046983;protein dimerization activity;0.00123678940420096!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00125651265303362!GO:0007041;lysosomal transport;0.00132513568854044!GO:0030149;sphingolipid catabolic process;0.00143200709117029!GO:0043087;regulation of GTPase activity;0.00148790629330303!GO:0030029;actin filament-based process;0.00153886022826895!GO:0044262;cellular carbohydrate metabolic process;0.00160051879998404!GO:0016072;rRNA metabolic process;0.00173657442045938!GO:0033116;ER-Golgi intermediate compartment membrane;0.00174013024606475!GO:0043085;positive regulation of catalytic activity;0.00175039695593993!GO:0043549;regulation of kinase activity;0.00187433129474317!GO:0043021;ribonucleoprotein binding;0.00207216452331811!GO:0016779;nucleotidyltransferase activity;0.00207216452331811!GO:0016301;kinase activity;0.00207216452331811!GO:0016363;nuclear matrix;0.00221620007413779!GO:0031901;early endosome membrane;0.00225540734609367!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00234008650788257!GO:0051090;regulation of transcription factor activity;0.00235090676126641!GO:0065004;protein-DNA complex assembly;0.00244384755360664!GO:0006919;caspase activation;0.0025027040206432!GO:0006364;rRNA processing;0.00250523563329105!GO:0031072;heat shock protein binding;0.00251965834216952!GO:0045454;cell redox homeostasis;0.00253565912103113!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00254000334647064!GO:0045941;positive regulation of transcription;0.00254743316875378!GO:0030099;myeloid cell differentiation;0.00260818543150855!GO:0002274;myeloid leukocyte activation;0.00276356786184329!GO:0016251;general RNA polymerase II transcription factor activity;0.00290458373579345!GO:0045859;regulation of protein kinase activity;0.00291222280711078!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00293035803103004!GO:0018193;peptidyl-amino acid modification;0.00299862583805254!GO:0048487;beta-tubulin binding;0.0030015006290686!GO:0060090;molecular adaptor activity;0.00308108635658824!GO:0019904;protein domain specific binding;0.00316825202373656!GO:0042990;regulation of transcription factor import into nucleus;0.00324202783676717!GO:0042991;transcription factor import into nucleus;0.00324202783676717!GO:0031325;positive regulation of cellular metabolic process;0.00338252380376563!GO:0005741;mitochondrial outer membrane;0.00355486906575188!GO:0043281;regulation of caspase activity;0.00362598888736846!GO:0006333;chromatin assembly or disassembly;0.00375347418138948!GO:0051187;cofactor catabolic process;0.00390690119761486!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00391835667696962!GO:0003690;double-stranded DNA binding;0.00403128344304628!GO:0045893;positive regulation of transcription, DNA-dependent;0.00404141090509677!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00420203901543849!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00420203901543849!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00420203901543849!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00422283380092907!GO:0006099;tricarboxylic acid cycle;0.00422283380092907!GO:0046356;acetyl-CoA catabolic process;0.00422283380092907!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00436834581320217!GO:0005813;centrosome;0.0045329470019631!GO:0006643;membrane lipid metabolic process;0.00457697084266813!GO:0022415;viral reproductive process;0.00461408943195439!GO:0045045;secretory pathway;0.00489250370671304!GO:0045321;leukocyte activation;0.00493749180755649!GO:0004197;cysteine-type endopeptidase activity;0.00493749180755649!GO:0043280;positive regulation of caspase activity;0.00495103889005917!GO:0000139;Golgi membrane;0.0050227850669923!GO:0006607;NLS-bearing substrate import into nucleus;0.00554397016737436!GO:0030097;hemopoiesis;0.00584220679589133!GO:0045449;regulation of transcription;0.00584220679589133!GO:0048471;perinuclear region of cytoplasm;0.00586807730373626!GO:0000287;magnesium ion binding;0.00591455797819747!GO:0006352;transcription initiation;0.00593213993961135!GO:0003702;RNA polymerase II transcription factor activity;0.00601948631525751!GO:0006891;intra-Golgi vesicle-mediated transport;0.00613633725377557!GO:0051252;regulation of RNA metabolic process;0.00615023895455919!GO:0046966;thyroid hormone receptor binding;0.00621385422859775!GO:0001817;regulation of cytokine production;0.00623665864992998!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00639644950464153!GO:0019377;glycolipid catabolic process;0.0066631171538301!GO:0042802;identical protein binding;0.0068741162517754!GO:0009165;nucleotide biosynthetic process;0.00706191370932159!GO:0006468;protein amino acid phosphorylation;0.00741873765275701!GO:0006351;transcription, DNA-dependent;0.00750341586385664!GO:0006084;acetyl-CoA metabolic process;0.00765291140867319!GO:0030041;actin filament polymerization;0.00824202913920468!GO:0032774;RNA biosynthetic process;0.00843322264173481!GO:0030867;rough endoplasmic reticulum membrane;0.00843708692423402!GO:0019867;outer membrane;0.00871736665173626!GO:0030134;ER to Golgi transport vesicle;0.00871736665173626!GO:0008270;zinc ion binding;0.00873310442785392!GO:0050851;antigen receptor-mediated signaling pathway;0.00876690036076648!GO:0031625;ubiquitin protein ligase binding;0.00876690036076648!GO:0048500;signal recognition particle;0.00893875433154316!GO:0004185;serine carboxypeptidase activity;0.00902584026475473!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00910612456725506!GO:0046479;glycosphingolipid catabolic process;0.00994920547533167!GO:0017166;vinculin binding;0.00994920547533167!GO:0000785;chromatin;0.0100293688590121!GO:0031968;organelle outer membrane;0.0102340489607142!GO:0006414;translational elongation;0.0106361720985907!GO:0005484;SNAP receptor activity;0.011269085643566!GO:0032386;regulation of intracellular transport;0.0117254808154343!GO:0051707;response to other organism;0.0117623260017492!GO:0030127;COPII vesicle coat;0.0117623260017492!GO:0012507;ER to Golgi transport vesicle membrane;0.0117623260017492!GO:0006954;inflammatory response;0.0119641962814142!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0121759973824468!GO:0032318;regulation of Ras GTPase activity;0.012207500511839!GO:0009109;coenzyme catabolic process;0.0123455503719838!GO:0006458;'de novo' protein folding;0.0124594669939576!GO:0051084;'de novo' posttranslational protein folding;0.0124594669939576!GO:0006091;generation of precursor metabolites and energy;0.0124594669939576!GO:0016791;phosphoric monoester hydrolase activity;0.0129148310805677!GO:0005048;signal sequence binding;0.0133772782404654!GO:0019318;hexose metabolic process;0.0137560582312597!GO:0045637;regulation of myeloid cell differentiation;0.0138800672349164!GO:0043488;regulation of mRNA stability;0.0139963148842586!GO:0043487;regulation of RNA stability;0.0139963148842586!GO:0003725;double-stranded RNA binding;0.0143698685710437!GO:0030521;androgen receptor signaling pathway;0.0144303515049018!GO:0006611;protein export from nucleus;0.0147644064955652!GO:0030118;clathrin coat;0.0148323751113233!GO:0030503;regulation of cell redox homeostasis;0.0149087280846999!GO:0030658;transport vesicle membrane;0.0149087280846999!GO:0042613;MHC class II protein complex;0.015111648683646!GO:0006405;RNA export from nucleus;0.015111648683646!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0154657860236884!GO:0045047;protein targeting to ER;0.0154657860236884!GO:0046914;transition metal ion binding;0.0156083583492742!GO:0030176;integral to endoplasmic reticulum membrane;0.0157141241949111!GO:0005815;microtubule organizing center;0.0158023153020516!GO:0030663;COPI coated vesicle membrane;0.0162951176499619!GO:0030126;COPI vesicle coat;0.0162951176499619!GO:0005694;chromosome;0.016296401558099!GO:0002444;myeloid leukocyte mediated immunity;0.0163910811589754!GO:0007259;JAK-STAT cascade;0.0164461671828048!GO:0008139;nuclear localization sequence binding;0.0165602877399039!GO:0030518;steroid hormone receptor signaling pathway;0.0166356469454729!GO:0043300;regulation of leukocyte degranulation;0.0168575564846159!GO:0004177;aminopeptidase activity;0.0171118279578607!GO:0050811;GABA receptor binding;0.0171118279578607!GO:0043621;protein self-association;0.0171118279578607!GO:0033367;protein localization in mast cell secretory granule;0.0171118279578607!GO:0033365;protein localization in organelle;0.0171118279578607!GO:0033371;T cell secretory granule organization and biogenesis;0.0171118279578607!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0171118279578607!GO:0033375;protease localization in T cell secretory granule;0.0171118279578607!GO:0042629;mast cell granule;0.0171118279578607!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0171118279578607!GO:0033364;mast cell secretory granule organization and biogenesis;0.0171118279578607!GO:0033380;granzyme B localization in T cell secretory granule;0.0171118279578607!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0171118279578607!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0171118279578607!GO:0033368;protease localization in mast cell secretory granule;0.0171118279578607!GO:0033366;protein localization in secretory granule;0.0171118279578607!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0171118279578607!GO:0033374;protein localization in T cell secretory granule;0.0171118279578607!GO:0006665;sphingolipid metabolic process;0.017196858026847!GO:0043433;negative regulation of transcription factor activity;0.0173646883390052!GO:0045576;mast cell activation;0.0176689376223673!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0181945411477949!GO:0008286;insulin receptor signaling pathway;0.0183401136897776!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0183440093141796!GO:0030027;lamellipodium;0.0185782811150446!GO:0005070;SH3/SH2 adaptor activity;0.0186039522700046!GO:0015631;tubulin binding;0.0187484906100264!GO:0051092;activation of NF-kappaB transcription factor;0.0189960828110494!GO:0001819;positive regulation of cytokine production;0.019259773751807!GO:0005996;monosaccharide metabolic process;0.019259773751807!GO:0000209;protein polyubiquitination;0.0197768514773043!GO:0051098;regulation of binding;0.0202951249575306!GO:0045920;negative regulation of exocytosis;0.0206447474941043!GO:0043301;negative regulation of leukocyte degranulation;0.0206447474941043!GO:0043305;negative regulation of mast cell degranulation;0.0206447474941043!GO:0008624;induction of apoptosis by extracellular signals;0.0209491803905549!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0209779559875758!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0209779559875758!GO:0004722;protein serine/threonine phosphatase activity;0.0210071316782567!GO:0019882;antigen processing and presentation;0.0210602299886187!GO:0000118;histone deacetylase complex;0.0210650362658742!GO:0030218;erythrocyte differentiation;0.021321955771488!GO:0043299;leukocyte degranulation;0.021321955771488!GO:0046467;membrane lipid biosynthetic process;0.0214488661041385!GO:0051345;positive regulation of hydrolase activity;0.0215679155218568!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0216480858894788!GO:0030137;COPI-coated vesicle;0.0217061849179275!GO:0019843;rRNA binding;0.0223919451045967!GO:0051049;regulation of transport;0.0224961529009924!GO:0051101;regulation of DNA binding;0.0226259113069827!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0229103775787232!GO:0002819;regulation of adaptive immune response;0.0229103775787232!GO:0043022;ribosome binding;0.0229278980337552!GO:0032763;regulation of mast cell cytokine production;0.023416262739534!GO:0032762;mast cell cytokine production;0.023416262739534!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0236060120155915!GO:0000339;RNA cap binding;0.0243335630390024!GO:0008312;7S RNA binding;0.0243335630390024!GO:0035035;histone acetyltransferase binding;0.0243497854567516!GO:0006689;ganglioside catabolic process;0.0252160635388218!GO:0006516;glycoprotein catabolic process;0.0255156569373895!GO:0003711;transcription elongation regulator activity;0.02563456002045!GO:0030100;regulation of endocytosis;0.0260949564437151!GO:0030119;AP-type membrane coat adaptor complex;0.0265932834409565!GO:0030133;transport vesicle;0.0269976228575371!GO:0006749;glutathione metabolic process;0.0269976228575371!GO:0015923;mannosidase activity;0.0277612768750195!GO:0000049;tRNA binding;0.0290907627338296!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0292616402453839!GO:0015036;disulfide oxidoreductase activity;0.029545263585039!GO:0008017;microtubule binding;0.029630639167618!GO:0006914;autophagy;0.0298259711561009!GO:0008656;caspase activator activity;0.0302073832875693!GO:0030660;Golgi-associated vesicle membrane;0.0304149925352825!GO:0004563;beta-N-acetylhexosaminidase activity;0.0304563403316843!GO:0030258;lipid modification;0.0306193555023404!GO:0042110;T cell activation;0.0315036384135302!GO:0035258;steroid hormone receptor binding;0.0318029436892442!GO:0051056;regulation of small GTPase mediated signal transduction;0.0318029436892442!GO:0005905;coated pit;0.0319054989057788!GO:0002520;immune system development;0.0322597873109566!GO:0005791;rough endoplasmic reticulum;0.0322597873109566!GO:0008383;manganese superoxide dismutase activity;0.0336106559812553!GO:0001315;age-dependent response to reactive oxygen species;0.0336106559812553!GO:0051235;maintenance of localization;0.0337694638496362!GO:0001775;cell activation;0.0344247044252759!GO:0046466;membrane lipid catabolic process;0.0344563038697179!GO:0046578;regulation of Ras protein signal transduction;0.0346908278052467!GO:0048534;hemopoietic or lymphoid organ development;0.0347439641417866!GO:0002252;immune effector process;0.0347439641417866!GO:0002224;toll-like receptor signaling pathway;0.0347439641417866!GO:0002221;pattern recognition receptor signaling pathway;0.0347439641417866!GO:0003746;translation elongation factor activity;0.0351588053327651!GO:0051085;chaperone cofactor-dependent protein folding;0.0351588053327651!GO:0033033;negative regulation of myeloid cell apoptosis;0.0351588053327651!GO:0001803;regulation of type III hypersensitivity;0.0351588053327651!GO:0032733;positive regulation of interleukin-10 production;0.0351588053327651!GO:0033025;regulation of mast cell apoptosis;0.0351588053327651!GO:0001805;positive regulation of type III hypersensitivity;0.0351588053327651!GO:0033023;mast cell homeostasis;0.0351588053327651!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0351588053327651!GO:0033032;regulation of myeloid cell apoptosis;0.0351588053327651!GO:0001802;type III hypersensitivity;0.0351588053327651!GO:0033028;myeloid cell apoptosis;0.0351588053327651!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0351588053327651!GO:0033026;negative regulation of mast cell apoptosis;0.0351588053327651!GO:0033024;mast cell apoptosis;0.0351588053327651!GO:0006354;RNA elongation;0.0351588053327651!GO:0051091;positive regulation of transcription factor activity;0.0359015402169156!GO:0016311;dephosphorylation;0.0370046252969612!GO:0002467;germinal center formation;0.0370046252969612!GO:0046649;lymphocyte activation;0.0384313872354607!GO:0050900;leukocyte migration;0.0389719300807573!GO:0030131;clathrin adaptor complex;0.0389975633767259!GO:0006650;glycerophospholipid metabolic process;0.0396902902329292!GO:0004860;protein kinase inhibitor activity;0.0401934613796557!GO:0006376;mRNA splice site selection;0.0406899163855653!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0406899163855653!GO:0032760;positive regulation of tumor necrosis factor production;0.0412020977902705!GO:0002237;response to molecule of bacterial origin;0.0416693270220075!GO:0006260;DNA replication;0.0420315908638387!GO:0045113;regulation of integrin biosynthetic process;0.0422386787810411!GO:0045112;integrin biosynthetic process;0.0422386787810411!GO:0005684;U2-dependent spliceosome;0.0426471394343977!GO:0000165;MAPKKK cascade;0.0429673245078156!GO:0006355;regulation of transcription, DNA-dependent;0.0430675120719207!GO:0030984;kininogen binding;0.0431639069829115!GO:0004213;cathepsin B activity;0.0431639069829115!GO:0008637;apoptotic mitochondrial changes;0.0439413297174859!GO:0006465;signal peptide processing;0.0440249284356756!GO:0019752;carboxylic acid metabolic process;0.0444728497242382!GO:0030833;regulation of actin filament polymerization;0.0447807157494333!GO:0000082;G1/S transition of mitotic cell cycle;0.0449911589100473!GO:0043304;regulation of mast cell degranulation;0.0450356950267439!GO:0008538;proteasome activator activity;0.0451605556888388!GO:0032640;tumor necrosis factor production;0.0462038462880113!GO:0031647;regulation of protein stability;0.0462779168331177!GO:0051247;positive regulation of protein metabolic process;0.0463280297240217!GO:0043506;regulation of JNK activity;0.0463280297240217!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.046402598726012!GO:0002821;positive regulation of adaptive immune response;0.046402598726012!GO:0030384;phosphoinositide metabolic process;0.0466248013366342!GO:0016505;apoptotic protease activator activity;0.0470660475447765!GO:0040029;regulation of gene expression, epigenetic;0.0471555781337901!GO:0042348;NF-kappaB import into nucleus;0.0475108123246875!GO:0042345;regulation of NF-kappaB import into nucleus;0.0475108123246875!GO:0019883;antigen processing and presentation of endogenous antigen;0.0478644429032236!GO:0008154;actin polymerization and/or depolymerization;0.0478644429032236!GO:0008629;induction of apoptosis by intracellular signals;0.0479878544915624!GO:0042611;MHC protein complex;0.0480884148039826!GO:0005100;Rho GTPase activator activity;0.0481557746681121!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0486212195314661!GO:0045603;positive regulation of endothelial cell differentiation;0.0486212195314661!GO:0003727;single-stranded RNA binding;0.0486212195314661!GO:0051050;positive regulation of transport;0.0489494232947927!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0489831438574844!GO:0033673;negative regulation of kinase activity;0.0490289247576672!GO:0006469;negative regulation of protein kinase activity;0.0490289247576672!GO:0005975;carbohydrate metabolic process;0.0493106625110782!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0493106625110782!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0493106625110782!GO:0005788;endoplasmic reticulum lumen;0.0497676222471224 | |||
|sample_id=11873 | |sample_id=11873 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=SREBF1,2:2.78189864305;SPI1:2.29522402875;SPIB:2.29332145778;NFE2L2:2.18818280531;PAX2:2.02258058698;NFE2:1.94422878;NANOG{mouse}:1.89483906338;DMAP1_NCOR{1,2}_SMARC:1.89091840787;ETS1,2:1.88303061279;EP300:1.85979363308;FOXP3:1.71351036481;BACH2:1.70524982709;SPZ1:1.59927012756;FOSL2:1.58968747532;CEBPA,B_DDIT3:1.47912563733;HMX1:1.46771423741;FOXD3:1.44935029897;FOS_FOS{B,L1}_JUN{B,D}:1.39446435121;NR1H4:1.36814125279;PDX1:1.36154370516;SMAD1..7,9:1.30591280132;TLX2:1.29997777128;ELF1,2,4:1.29795677775;FOXN1:1.26886376264;ESR1:1.24331110961;HLF:1.1933039528;RUNX1..3:1.17520354783;HES1:1.15310648377;ATF5_CREB3:1.12820115403;NFIL3:1.10995005946;NFE2L1:1.10157449882;ATF4:1.09617538898;TFCP2:0.99568699561;GLI1..3:0.97461215425;ESRRA:0.973511296725;IRF1,2:0.957454933995;RXRA_VDR{dimer}:0.876179171791;PPARG:0.857177406923;MAFB:0.773780808546;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.768114534984;HIF1A:0.76182412897;NFKB1_REL_RELA:0.75935029106;ATF6:0.728049886952;FOX{D1,D2}:0.644815741392;CREB1:0.642135439336;TGIF1:0.6182888733;FOX{F1,F2,J1}:0.612088753091;IRF7:0.605655420198;JUN:0.449245059618;NANOG:0.375159606326;FOXO1,3,4:0.370039779172;RFX2..5_RFXANK_RFXAP:0.362972580881;HBP1_HMGB_SSRP1_UBTF:0.34305198996;ZBTB16:0.342521323505;NFIX:0.33591679457;HMGA1,2:0.326233362551;PRDM1:0.304388696422;ZNF148:0.275537256885;AHR_ARNT_ARNT2:0.262671364922;BPTF:0.250535266047;HSF1,2:0.249666223549;IKZF2:0.223527578857;CDX1,2,4:0.185948847825;ALX4:0.185244831788;GATA4:0.129184436669;PITX1..3:0.112275353843;MYB:0.112042865635;STAT2,4,6:0.0951265761878;ATF2:0.073482276229;MYFfamily:0.0684718823837;HNF4A_NR2F1,2:0.00396715450118;FOXP1:-0.0354916939138;EGR1..3:-0.0593948358401;OCT4_SOX2{dimer}:-0.0613876389356;POU1F1:-0.090411253842;STAT1,3:-0.149877113449;ZBTB6:-0.1529987667;NR6A1:-0.181568432728;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.19078010958;PATZ1:-0.193860527193;NKX3-2:-0.198924639883;TOPORS:-0.220368671686;NKX6-1,2:-0.240460786933;NKX2-2,8:-0.242631955843;PAX4:-0.25652717383;TFAP4:-0.274487045657;PAX3,7:-0.304307746906;REST:-0.307193280091;MZF1:-0.315389428085;RXR{A,B,G}:-0.32049439479;RREB1:-0.323872503789;VSX1,2:-0.326553798112;TBP:-0.338169975566;POU5F1:-0.339262032279;EVI1:-0.357372128182;ZNF238:-0.36444613403;ALX1:-0.407949848041;CUX2:-0.426144962777;MED-1{core}:-0.426812328324;GATA6:-0.435828079958;TFAP2{A,C}:-0.438194853769;EN1,2:-0.463778067171;SRF:-0.499209602442;PRRX1,2:-0.499661967625;XBP1:-0.504233411533;HOX{A6,A7,B6,B7}:-0.517399112086;NHLH1,2:-0.520069204712;FOXM1:-0.56197199346;AIRE:-0.566696533384;HNF1A:-0.567381150159;ZIC1..3:-0.581299679847;LMO2:-0.585348873969;GCM1,2:-0.585857112749;PAX1,9:-0.623393871601;RBPJ:-0.632067930419;TBX4,5:-0.657018317712;HOX{A5,B5}:-0.666912090832;STAT5{A,B}:-0.668755756689;EBF1:-0.675212013999;PAX8:-0.681487788261;SOX2:-0.683604397956;TFAP2B:-0.686240702669;MEF2{A,B,C,D}:-0.691446782038;HOX{A4,D4}:-0.70644856542;TAL1_TCF{3,4,12}:-0.723456369156;MYOD1:-0.730186027269;ZNF423:-0.739984993926;GZF1:-0.788889244122;SOX5:-0.796308603762;MTE{core}:-0.80470239984;ZFP161:-0.827380996627;MTF1:-0.830284187396;TLX1..3_NFIC{dimer}:-0.859601866792;NKX2-3_NKX2-5:-0.865554042824;GTF2A1,2:-0.871548610044;NKX3-1:-0.875429559681;KLF4:-0.879303481503;AR:-0.899798374649;CRX:-0.900628611503;HAND1,2:-0.926734154618;ZEB1:-0.936290220199;UFEwm:-0.951162320723;NFATC1..3:-0.960580730894;FOXA2:-0.965866899993;TP53:-0.984006125039;HOXA9_MEIS1:-0.984192624946;PAX5:-0.99257966114;NR5A1,2:-0.998989486484;MYBL2:-1.00158519699;ELK1,4_GABP{A,B1}:-1.00994979459;MAZ:-1.01003094541;POU2F1..3:-1.0297605812;TFDP1:-1.03104863591;RORA:-1.03225150073;TEF:-1.0653956833;GTF2I:-1.06963331666;PAX6:-1.07763832466;IKZF1:-1.09908565583;XCPE1{core}:-1.14602327501;SP1:-1.15114050895;ONECUT1,2:-1.15718221969;RFX1:-1.18779429357;POU6F1:-1.1879861826;SNAI1..3:-1.21776647728;TEAD1:-1.22761411247;T:-1.26861843782;FOXQ1:-1.27255803254;YY1:-1.28175412126;BREu{core}:-1.2899404555;SOX{8,9,10}:-1.32420620027;HIC1:-1.3262106696;FOXL1:-1.34146106668;ARID5B:-1.34643797081;DBP:-1.3527455384;ZNF384:-1.42476296469;E2F1..5:-1.44563501454;NR3C1:-1.52575464466;CDC5L:-1.58903577401;LHX3,4:-1.60193976783;GFI1B:-1.70857399852;NKX2-1,4:-1.71819117281;bHLH_family:-1.78359160034;FOX{I1,J2}:-1.87473398412;NRF1:-1.87796469643;SOX17:-2.08275220254;PBX1:-2.08731233295;POU3F1..4:-2.10967091076;NFY{A,B,C}:-2.14145119405;ZNF143:-2.30042593616;LEF1_TCF7_TCF7L1,2:-2.3366347032;GFI1:-2.38090067199;ADNP_IRX_SIX_ZHX:-2.3838380903 | |top_motifs=SREBF1,2:2.78189864305;SPI1:2.29522402875;SPIB:2.29332145778;NFE2L2:2.18818280531;PAX2:2.02258058698;NFE2:1.94422878;NANOG{mouse}:1.89483906338;DMAP1_NCOR{1,2}_SMARC:1.89091840787;ETS1,2:1.88303061279;EP300:1.85979363308;FOXP3:1.71351036481;BACH2:1.70524982709;SPZ1:1.59927012756;FOSL2:1.58968747532;CEBPA,B_DDIT3:1.47912563733;HMX1:1.46771423741;FOXD3:1.44935029897;FOS_FOS{B,L1}_JUN{B,D}:1.39446435121;NR1H4:1.36814125279;PDX1:1.36154370516;SMAD1..7,9:1.30591280132;TLX2:1.29997777128;ELF1,2,4:1.29795677775;FOXN1:1.26886376264;ESR1:1.24331110961;HLF:1.1933039528;RUNX1..3:1.17520354783;HES1:1.15310648377;ATF5_CREB3:1.12820115403;NFIL3:1.10995005946;NFE2L1:1.10157449882;ATF4:1.09617538898;TFCP2:0.99568699561;GLI1..3:0.97461215425;ESRRA:0.973511296725;IRF1,2:0.957454933995;RXRA_VDR{dimer}:0.876179171791;PPARG:0.857177406923;MAFB:0.773780808546;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.768114534984;HIF1A:0.76182412897;NFKB1_REL_RELA:0.75935029106;ATF6:0.728049886952;FOX{D1,D2}:0.644815741392;CREB1:0.642135439336;TGIF1:0.6182888733;FOX{F1,F2,J1}:0.612088753091;IRF7:0.605655420198;JUN:0.449245059618;NANOG:0.375159606326;FOXO1,3,4:0.370039779172;RFX2..5_RFXANK_RFXAP:0.362972580881;HBP1_HMGB_SSRP1_UBTF:0.34305198996;ZBTB16:0.342521323505;NFIX:0.33591679457;HMGA1,2:0.326233362551;PRDM1:0.304388696422;ZNF148:0.275537256885;AHR_ARNT_ARNT2:0.262671364922;BPTF:0.250535266047;HSF1,2:0.249666223549;IKZF2:0.223527578857;CDX1,2,4:0.185948847825;ALX4:0.185244831788;GATA4:0.129184436669;PITX1..3:0.112275353843;MYB:0.112042865635;STAT2,4,6:0.0951265761878;ATF2:0.073482276229;MYFfamily:0.0684718823837;HNF4A_NR2F1,2:0.00396715450118;FOXP1:-0.0354916939138;EGR1..3:-0.0593948358401;OCT4_SOX2{dimer}:-0.0613876389356;POU1F1:-0.090411253842;STAT1,3:-0.149877113449;ZBTB6:-0.1529987667;NR6A1:-0.181568432728;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.19078010958;PATZ1:-0.193860527193;NKX3-2:-0.198924639883;TOPORS:-0.220368671686;NKX6-1,2:-0.240460786933;NKX2-2,8:-0.242631955843;PAX4:-0.25652717383;TFAP4:-0.274487045657;PAX3,7:-0.304307746906;REST:-0.307193280091;MZF1:-0.315389428085;RXR{A,B,G}:-0.32049439479;RREB1:-0.323872503789;VSX1,2:-0.326553798112;TBP:-0.338169975566;POU5F1:-0.339262032279;EVI1:-0.357372128182;ZNF238:-0.36444613403;ALX1:-0.407949848041;CUX2:-0.426144962777;MED-1{core}:-0.426812328324;GATA6:-0.435828079958;TFAP2{A,C}:-0.438194853769;EN1,2:-0.463778067171;SRF:-0.499209602442;PRRX1,2:-0.499661967625;XBP1:-0.504233411533;HOX{A6,A7,B6,B7}:-0.517399112086;NHLH1,2:-0.520069204712;FOXM1:-0.56197199346;AIRE:-0.566696533384;HNF1A:-0.567381150159;ZIC1..3:-0.581299679847;LMO2:-0.585348873969;GCM1,2:-0.585857112749;PAX1,9:-0.623393871601;RBPJ:-0.632067930419;TBX4,5:-0.657018317712;HOX{A5,B5}:-0.666912090832;STAT5{A,B}:-0.668755756689;EBF1:-0.675212013999;PAX8:-0.681487788261;SOX2:-0.683604397956;TFAP2B:-0.686240702669;MEF2{A,B,C,D}:-0.691446782038;HOX{A4,D4}:-0.70644856542;TAL1_TCF{3,4,12}:-0.723456369156;MYOD1:-0.730186027269;ZNF423:-0.739984993926;GZF1:-0.788889244122;SOX5:-0.796308603762;MTE{core}:-0.80470239984;ZFP161:-0.827380996627;MTF1:-0.830284187396;TLX1..3_NFIC{dimer}:-0.859601866792;NKX2-3_NKX2-5:-0.865554042824;GTF2A1,2:-0.871548610044;NKX3-1:-0.875429559681;KLF4:-0.879303481503;AR:-0.899798374649;CRX:-0.900628611503;HAND1,2:-0.926734154618;ZEB1:-0.936290220199;UFEwm:-0.951162320723;NFATC1..3:-0.960580730894;FOXA2:-0.965866899993;TP53:-0.984006125039;HOXA9_MEIS1:-0.984192624946;PAX5:-0.99257966114;NR5A1,2:-0.998989486484;MYBL2:-1.00158519699;ELK1,4_GABP{A,B1}:-1.00994979459;MAZ:-1.01003094541;POU2F1..3:-1.0297605812;TFDP1:-1.03104863591;RORA:-1.03225150073;TEF:-1.0653956833;GTF2I:-1.06963331666;PAX6:-1.07763832466;IKZF1:-1.09908565583;XCPE1{core}:-1.14602327501;SP1:-1.15114050895;ONECUT1,2:-1.15718221969;RFX1:-1.18779429357;POU6F1:-1.1879861826;SNAI1..3:-1.21776647728;TEAD1:-1.22761411247;T:-1.26861843782;FOXQ1:-1.27255803254;YY1:-1.28175412126;BREu{core}:-1.2899404555;SOX{8,9,10}:-1.32420620027;HIC1:-1.3262106696;FOXL1:-1.34146106668;ARID5B:-1.34643797081;DBP:-1.3527455384;ZNF384:-1.42476296469;E2F1..5:-1.44563501454;NR3C1:-1.52575464466;CDC5L:-1.58903577401;LHX3,4:-1.60193976783;GFI1B:-1.70857399852;NKX2-1,4:-1.71819117281;bHLH_family:-1.78359160034;FOX{I1,J2}:-1.87473398412;NRF1:-1.87796469643;SOX17:-2.08275220254;PBX1:-2.08731233295;POU3F1..4:-2.10967091076;NFY{A,B,C}:-2.14145119405;ZNF143:-2.30042593616;LEF1_TCF7_TCF7L1,2:-2.3366347032;GFI1:-2.38090067199;ADNP_IRX_SIX_ZHX:-2.3838380903 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11873-125C1;search_select_hide=table117:FF:11873-125C1 | |||
}} | }} | ||
Latest revision as of 18:25, 4 June 2020
| Name: | CD14+ monocytes - mock treated, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13484 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13484
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13484
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.123 |
| 10 | 10 | 0.0241 |
| 100 | 100 | 0.604 |
| 101 | 101 | 0.611 |
| 102 | 102 | 0.338 |
| 103 | 103 | 0.244 |
| 104 | 104 | 0.727 |
| 105 | 105 | 0.335 |
| 106 | 106 | 6.73142e-4 |
| 107 | 107 | 0.14 |
| 108 | 108 | 0.999 |
| 109 | 109 | 0.22 |
| 11 | 11 | 0.2 |
| 110 | 110 | 0.295 |
| 111 | 111 | 0.0536 |
| 112 | 112 | 0.192 |
| 113 | 113 | 0.604 |
| 114 | 114 | 0.0161 |
| 115 | 115 | 0.236 |
| 116 | 116 | 0.792 |
| 117 | 117 | 0.0659 |
| 118 | 118 | 0.189 |
| 119 | 119 | 0.191 |
| 12 | 12 | 0.378 |
| 120 | 120 | 0.921 |
| 121 | 121 | 0.519 |
| 122 | 122 | 0.51 |
| 123 | 123 | 0.0585 |
| 124 | 124 | 0.816 |
| 125 | 125 | 0.83 |
| 126 | 126 | 0.253 |
| 127 | 127 | 0.252 |
| 128 | 128 | 0.0206 |
| 129 | 129 | 0.412 |
| 13 | 13 | 0.271 |
| 130 | 130 | 0.133 |
| 131 | 131 | 0.376 |
| 132 | 132 | 0.0748 |
| 133 | 133 | 0.94 |
| 134 | 134 | 0.56 |
| 135 | 135 | 0.219 |
| 136 | 136 | 0.819 |
| 137 | 137 | 0.00391 |
| 138 | 138 | 0.174 |
| 139 | 139 | 0.037 |
| 14 | 14 | 0.387 |
| 140 | 140 | 0.119 |
| 141 | 141 | 0.441 |
| 142 | 142 | 0.964 |
| 143 | 143 | 0.027 |
| 144 | 144 | 0.834 |
| 145 | 145 | 0.545 |
| 146 | 146 | 0.62 |
| 147 | 147 | 0.26 |
| 148 | 148 | 0.0155 |
| 149 | 149 | 0.598 |
| 15 | 15 | 0.157 |
| 150 | 150 | 0.51 |
| 151 | 151 | 0.281 |
| 152 | 152 | 0.0821 |
| 153 | 153 | 0.363 |
| 154 | 154 | 0.383 |
| 155 | 155 | 0.27 |
| 156 | 156 | 0.88 |
| 157 | 157 | 0.48 |
| 158 | 158 | 0.0815 |
| 159 | 159 | 0.739 |
| 16 | 16 | 0.326 |
| 160 | 160 | 0.473 |
| 161 | 161 | 0.596 |
| 162 | 162 | 0.364 |
| 163 | 163 | 0.605 |
| 164 | 164 | 0.175 |
| 165 | 165 | 0.141 |
| 166 | 166 | 0.504 |
| 167 | 167 | 0.308 |
| 168 | 168 | 0.466 |
| 169 | 169 | 0.00913 |
| 17 | 17 | 0.16 |
| 18 | 18 | 0.173 |
| 19 | 19 | 0.257 |
| 2 | 2 | 0.823 |
| 20 | 20 | 0.447 |
| 21 | 21 | 0.208 |
| 22 | 22 | 0.155 |
| 23 | 23 | 0.0568 |
| 24 | 24 | 0.243 |
| 25 | 25 | 0.334 |
| 26 | 26 | 0.045 |
| 27 | 27 | 0.618 |
| 28 | 28 | 0.416 |
| 29 | 29 | 0.386 |
| 3 | 3 | 0.0713 |
| 30 | 30 | 0.701 |
| 31 | 31 | 0.674 |
| 32 | 32 | 0.831 |
| 33 | 33 | 0.625 |
| 34 | 34 | 0.309 |
| 35 | 35 | 0.201 |
| 36 | 36 | 0.256 |
| 37 | 37 | 0.0675 |
| 38 | 38 | 0.299 |
| 39 | 39 | 0.728 |
| 4 | 4 | 0.723 |
| 40 | 40 | 0.306 |
| 41 | 41 | 0.0134 |
| 42 | 42 | 0.37 |
| 43 | 43 | 0.0509 |
| 44 | 44 | 0.694 |
| 45 | 45 | 0.61 |
| 46 | 46 | 0.124 |
| 47 | 47 | 0.584 |
| 48 | 48 | 0.484 |
| 49 | 49 | 0.116 |
| 5 | 5 | 0.207 |
| 50 | 50 | 0.976 |
| 51 | 51 | 0.317 |
| 52 | 52 | 0.259 |
| 53 | 53 | 0.244 |
| 54 | 54 | 0.274 |
| 55 | 55 | 0.202 |
| 56 | 56 | 0.631 |
| 57 | 57 | 0.769 |
| 58 | 58 | 0.0781 |
| 59 | 59 | 0.0892 |
| 6 | 6 | 0.587 |
| 60 | 60 | 0.0385 |
| 61 | 61 | 0.423 |
| 62 | 62 | 0.0268 |
| 63 | 63 | 0.465 |
| 64 | 64 | 0.421 |
| 65 | 65 | 0.199 |
| 66 | 66 | 0.345 |
| 67 | 67 | 0.426 |
| 68 | 68 | 0.773 |
| 69 | 69 | 0.638 |
| 7 | 7 | 0.252 |
| 70 | 70 | 0.0162 |
| 71 | 71 | 0.0355 |
| 72 | 72 | 0.246 |
| 73 | 73 | 0.0894 |
| 74 | 74 | 0.0425 |
| 75 | 75 | 0.0802 |
| 76 | 76 | 0.285 |
| 77 | 77 | 0.371 |
| 78 | 78 | 0.0865 |
| 79 | 79 | 0.0912 |
| 8 | 8 | 0.361 |
| 80 | 80 | 0.237 |
| 81 | 81 | 0.399 |
| 82 | 82 | 0.0839 |
| 83 | 83 | 0.145 |
| 84 | 84 | 0.663 |
| 85 | 85 | 0.00833 |
| 86 | 86 | 0.0356 |
| 87 | 87 | 0.365 |
| 88 | 88 | 0.409 |
| 89 | 89 | 0.31 |
| 9 | 9 | 0.332 |
| 90 | 90 | 0.0722 |
| 91 | 91 | 0.349 |
| 92 | 92 | 0.144 |
| 93 | 93 | 0.143 |
| 94 | 94 | 0.033 |
| 95 | 95 | 0.405 |
| 96 | 96 | 0.543 |
| 97 | 97 | 0.999 |
| 98 | 98 | 0.142 |
| 99 | 99 | 0.159 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13484
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011101 human CD14-positive monocytes - mock treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000343 (control treatment sample)
0000350 (experimentally modified sample)
0011101 (human CD14-positive monocytes - mock treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
