FF:11930-125I4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005171 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008326;DRR009198;DRZ000623;DRZ002008;DRZ011973;DRZ013358 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000075,UBERON:0004765,UBERON:0001708,UBERON:0011159,UBERON:0002204,UBERON:0001434,UBERON:0008895,UBERON:0011137,UBERON:0010323 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002159,CL:0000255,CL:0002077,CL:0002166 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000087 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor3.CNhs13551.11930-125I4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor3.CNhs13551.11930-125I4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor3.CNhs13551.11930-125I4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor3.CNhs13551.11930-125I4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor3.CNhs13551.11930-125I4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11930-125I4 | |id=FF:11930-125I4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000087 | ||
|is_obsolete= | |||
|library_id=CNhs13551 | |||
|library_id_phase_based=2:CNhs13551 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11930 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11930 | |||
|name=Mallassez-derived cells, donor3 | |name=Mallassez-derived cells, donor3 | ||
|namespace= | |namespace= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=25.1386 | |rna_weight_ug=25.1386 | ||
|sample_age=18 | |sample_age=18 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.23154322965477e-245!GO:0005737;cytoplasm;8.71265433711603e-213!GO:0043226;organelle;1.90742292236391e-183!GO:0043229;intracellular organelle;8.09084782389176e-183!GO:0043231;intracellular membrane-bound organelle;7.89522845745196e-166!GO:0043227;membrane-bound organelle;1.11598864891571e-165!GO:0044422;organelle part;7.24628568276365e-144!GO:0044446;intracellular organelle part;1.86693365130186e-142!GO:0044444;cytoplasmic part;1.36593080437282e-137!GO:0032991;macromolecular complex;6.17929144678854e-100!GO:0030529;ribonucleoprotein complex;1.88784034706489e-92!GO:0044238;primary metabolic process;4.75657810191659e-81!GO:0044237;cellular metabolic process;2.37287894957466e-80!GO:0005515;protein binding;1.18634470292501e-74!GO:0043170;macromolecule metabolic process;1.15608089876836e-72!GO:0003723;RNA binding;2.37072151478324e-70!GO:0005739;mitochondrion;3.81334591399781e-70!GO:0043233;organelle lumen;2.95483612058014e-69!GO:0031974;membrane-enclosed lumen;2.95483612058014e-69!GO:0044428;nuclear part;1.78635298137955e-64!GO:0005634;nucleus;2.20086521518773e-57!GO:0019538;protein metabolic process;9.531208881587e-57!GO:0005840;ribosome;2.13666011578126e-56!GO:0006412;translation;1.28355229876941e-55!GO:0031090;organelle membrane;6.65361357805117e-51!GO:0015031;protein transport;1.28275721438181e-50!GO:0033036;macromolecule localization;4.13030471928184e-50!GO:0003735;structural constituent of ribosome;4.27158186632663e-50!GO:0016043;cellular component organization and biogenesis;5.79965806594629e-50!GO:0044267;cellular protein metabolic process;2.32239117792986e-49!GO:0044260;cellular macromolecule metabolic process;3.08315950443879e-49!GO:0043234;protein complex;7.03060546284816e-49!GO:0006396;RNA processing;5.21399403522225e-48!GO:0044429;mitochondrial part;3.862128326501e-47!GO:0045184;establishment of protein localization;4.38844789262957e-47!GO:0008104;protein localization;1.06612538429148e-46!GO:0009058;biosynthetic process;1.68913949981556e-46!GO:0005829;cytosol;5.41101337231626e-44!GO:0044249;cellular biosynthetic process;4.90797725081928e-43!GO:0043228;non-membrane-bound organelle;4.9747100897689e-43!GO:0043232;intracellular non-membrane-bound organelle;4.9747100897689e-43!GO:0009059;macromolecule biosynthetic process;5.03040882846216e-43!GO:0033279;ribosomal subunit;1.71499789337409e-42!GO:0031981;nuclear lumen;3.74592937236602e-40!GO:0031967;organelle envelope;4.11867899153892e-40!GO:0031975;envelope;1.05535439438394e-39!GO:0046907;intracellular transport;2.14426777341222e-39!GO:0016071;mRNA metabolic process;1.35901385822015e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.47932396674485e-36!GO:0065003;macromolecular complex assembly;1.55996280757491e-35!GO:0008380;RNA splicing;3.19475529442807e-35!GO:0043283;biopolymer metabolic process;1.82868275692657e-34!GO:0006886;intracellular protein transport;3.31508895423786e-33!GO:0006397;mRNA processing;4.97636300265847e-32!GO:0010467;gene expression;7.82921013346829e-32!GO:0022607;cellular component assembly;1.94774764915144e-31!GO:0006996;organelle organization and biogenesis;4.47257695681593e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.62228345953963e-31!GO:0005740;mitochondrial envelope;3.83916688485584e-30!GO:0031966;mitochondrial membrane;6.22113294016599e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.26156589605403e-27!GO:0019866;organelle inner membrane;3.40980896654771e-26!GO:0044445;cytosolic part;1.06984847281266e-25!GO:0005681;spliceosome;1.09181117642223e-25!GO:0051649;establishment of cellular localization;2.05355086662258e-25!GO:0051641;cellular localization;3.47189003484892e-25!GO:0005743;mitochondrial inner membrane;7.38341719288914e-25!GO:0005654;nucleoplasm;1.06629820750166e-22!GO:0000166;nucleotide binding;1.22943223773098e-22!GO:0016462;pyrophosphatase activity;1.73200095345364e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.83072587199406e-22!GO:0006119;oxidative phosphorylation;1.84818035081937e-22!GO:0015935;small ribosomal subunit;2.06541706869869e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.91868345867846e-22!GO:0022618;protein-RNA complex assembly;7.04359480975609e-22!GO:0006457;protein folding;1.36352106029109e-21!GO:0017111;nucleoside-triphosphatase activity;1.36678406987076e-21!GO:0015934;large ribosomal subunit;4.47955535872006e-21!GO:0006259;DNA metabolic process;6.20947722761365e-21!GO:0031980;mitochondrial lumen;1.02540963000124e-20!GO:0005759;mitochondrial matrix;1.02540963000124e-20!GO:0044455;mitochondrial membrane part;1.4327284195117e-20!GO:0012505;endomembrane system;1.45767925548049e-20!GO:0005730;nucleolus;5.75360901548696e-20!GO:0005783;endoplasmic reticulum;1.49573342593378e-19!GO:0007049;cell cycle;2.19098143213207e-19!GO:0016874;ligase activity;2.51234482983432e-19!GO:0044451;nucleoplasm part;2.64158312008008e-18!GO:0043285;biopolymer catabolic process;2.96694605161359e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;7.72733804864864e-18!GO:0048770;pigment granule;1.29922755442898e-17!GO:0042470;melanosome;1.29922755442898e-17!GO:0019941;modification-dependent protein catabolic process;1.60233998267205e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.60233998267205e-17!GO:0044257;cellular protein catabolic process;2.50259649345765e-17!GO:0006512;ubiquitin cycle;3.08684427153498e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.96718972322263e-17!GO:0044265;cellular macromolecule catabolic process;4.13344940801461e-17!GO:0000502;proteasome complex (sensu Eukaryota);7.37113885971076e-17!GO:0030163;protein catabolic process;8.36101721558398e-17!GO:0009057;macromolecule catabolic process;1.65364283666007e-16!GO:0012501;programmed cell death;1.85269500191366e-16!GO:0017076;purine nucleotide binding;2.27734285677082e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.76659218347687e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.83112657147751e-16!GO:0006915;apoptosis;4.34206289181708e-16!GO:0008135;translation factor activity, nucleic acid binding;4.42560100111682e-16!GO:0044248;cellular catabolic process;5.21220465372195e-16!GO:0005761;mitochondrial ribosome;5.23522934347137e-16!GO:0000313;organellar ribosome;5.23522934347137e-16!GO:0032553;ribonucleotide binding;5.84834867980004e-16!GO:0032555;purine ribonucleotide binding;5.84834867980004e-16!GO:0044432;endoplasmic reticulum part;6.3469975881192e-16!GO:0051186;cofactor metabolic process;6.40584491358503e-16!GO:0005794;Golgi apparatus;7.209427935697e-16!GO:0006605;protein targeting;7.313305102856e-16!GO:0005746;mitochondrial respiratory chain;8.10773737639661e-16!GO:0042254;ribosome biogenesis and assembly;3.16870047324066e-15!GO:0051082;unfolded protein binding;5.7033737372431e-15!GO:0006413;translational initiation;6.16305253092079e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.62368108864529e-15!GO:0050136;NADH dehydrogenase (quinone) activity;7.18006059755486e-15!GO:0003954;NADH dehydrogenase activity;7.18006059755486e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.18006059755486e-15!GO:0048193;Golgi vesicle transport;7.41484942578982e-15!GO:0008219;cell death;1.27472024109105e-14!GO:0016265;death;1.27472024109105e-14!GO:0003743;translation initiation factor activity;3.07204030806865e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.75579415752048e-14!GO:0022402;cell cycle process;6.82387531782065e-14!GO:0006974;response to DNA damage stimulus;1.16820104751978e-13!GO:0016192;vesicle-mediated transport;1.26596705520982e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.27773596181414e-13!GO:0000375;RNA splicing, via transesterification reactions;1.27773596181414e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.27773596181414e-13!GO:0008134;transcription factor binding;1.99462983972067e-13!GO:0006732;coenzyme metabolic process;2.76902349240918e-13!GO:0003676;nucleic acid binding;3.20842353817349e-13!GO:0000278;mitotic cell cycle;3.23371077035661e-13!GO:0042775;organelle ATP synthesis coupled electron transport;3.49153543950436e-13!GO:0042773;ATP synthesis coupled electron transport;3.49153543950436e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.2306219809697e-13!GO:0045271;respiratory chain complex I;4.2306219809697e-13!GO:0005747;mitochondrial respiratory chain complex I;4.2306219809697e-13!GO:0043412;biopolymer modification;4.78806482418582e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.21526565229178e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.92360491978137e-12!GO:0043067;regulation of programmed cell death;3.44467198160976e-12!GO:0042981;regulation of apoptosis;4.29746088287655e-12!GO:0009055;electron carrier activity;6.23006103005436e-12!GO:0006461;protein complex assembly;6.59636896019646e-12!GO:0006446;regulation of translational initiation;6.84227170454686e-12!GO:0005789;endoplasmic reticulum membrane;7.14757904945334e-12!GO:0006464;protein modification process;7.3762375267937e-12!GO:0008565;protein transporter activity;1.41151108418356e-11!GO:0005524;ATP binding;1.68671331376792e-11!GO:0030554;adenyl nucleotide binding;1.84911191112119e-11!GO:0032559;adenyl ribonucleotide binding;3.7477346393237e-11!GO:0009259;ribonucleotide metabolic process;4.2263152260985e-11!GO:0003924;GTPase activity;4.41644875759517e-11!GO:0009056;catabolic process;4.46893215829575e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.48045018834099e-11!GO:0006281;DNA repair;5.59154538358449e-11!GO:0016070;RNA metabolic process;8.45784647032296e-11!GO:0005635;nuclear envelope;1.15852640429559e-10!GO:0008639;small protein conjugating enzyme activity;1.25934653630998e-10!GO:0019787;small conjugating protein ligase activity;1.45544537716342e-10!GO:0016604;nuclear body;1.7324533088962e-10!GO:0004842;ubiquitin-protein ligase activity;2.02905271629298e-10!GO:0006163;purine nucleotide metabolic process;2.13438194800065e-10!GO:0043687;post-translational protein modification;2.28336255286851e-10!GO:0006399;tRNA metabolic process;2.69476496497708e-10!GO:0006913;nucleocytoplasmic transport;4.4853132056251e-10!GO:0009150;purine ribonucleotide metabolic process;5.20213546002126e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.67677652480504e-10!GO:0004386;helicase activity;6.62273283350852e-10!GO:0009719;response to endogenous stimulus;7.19483979714074e-10!GO:0006364;rRNA processing;7.91540873089337e-10!GO:0009260;ribonucleotide biosynthetic process;8.07162323577389e-10!GO:0009141;nucleoside triphosphate metabolic process;9.64635125433064e-10!GO:0051169;nuclear transport;9.92479231689575e-10!GO:0000074;regulation of progression through cell cycle;1.0258405008152e-09!GO:0016072;rRNA metabolic process;1.24098087708939e-09!GO:0044453;nuclear membrane part;1.24247742170178e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.29576138043599e-09!GO:0051726;regulation of cell cycle;1.43748014837082e-09!GO:0031965;nuclear membrane;1.45498407471054e-09!GO:0006164;purine nucleotide biosynthetic process;1.48149779748398e-09!GO:0016881;acid-amino acid ligase activity;1.553104805963e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.69406775336896e-09!GO:0042623;ATPase activity, coupled;1.75786417726525e-09!GO:0000087;M phase of mitotic cell cycle;1.97427153120472e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.29987788573435e-09!GO:0048475;coated membrane;2.3174424596768e-09!GO:0030117;membrane coat;2.3174424596768e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.44280276753169e-09!GO:0005694;chromosome;2.66984789600164e-09!GO:0016887;ATPase activity;3.35650510298596e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.42765567659926e-09!GO:0007067;mitosis;3.47688150761407e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.88053811596519e-09!GO:0005793;ER-Golgi intermediate compartment;4.02432515486512e-09!GO:0005768;endosome;4.83206551154394e-09!GO:0009142;nucleoside triphosphate biosynthetic process;7.68991400733841e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.68991400733841e-09!GO:0008026;ATP-dependent helicase activity;8.16273820554017e-09!GO:0051188;cofactor biosynthetic process;8.5639235960236e-09!GO:0048523;negative regulation of cellular process;8.80084142468538e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.87309110422216e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.87309110422216e-09!GO:0030120;vesicle coat;9.66704549822108e-09!GO:0030662;coated vesicle membrane;9.66704549822108e-09!GO:0043069;negative regulation of programmed cell death;1.03809258147851e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.19128714873705e-08!GO:0015986;ATP synthesis coupled proton transport;1.42946599775326e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.42946599775326e-08!GO:0016607;nuclear speck;1.52476063197694e-08!GO:0022403;cell cycle phase;1.5860052293177e-08!GO:0005525;GTP binding;1.73767429253112e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.77331050857771e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.77331050857771e-08!GO:0051246;regulation of protein metabolic process;1.87867012412704e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.20021048096999e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.51055854926114e-08!GO:0051301;cell division;2.67774238761704e-08!GO:0043066;negative regulation of apoptosis;3.03110936300838e-08!GO:0017038;protein import;3.79263784580509e-08!GO:0051276;chromosome organization and biogenesis;3.82252748500808e-08!GO:0007005;mitochondrion organization and biogenesis;4.18452051688236e-08!GO:0044427;chromosomal part;4.91637050189947e-08!GO:0006916;anti-apoptosis;5.62515485826597e-08!GO:0009060;aerobic respiration;5.96296063421619e-08!GO:0016779;nucleotidyltransferase activity;6.07740676659797e-08!GO:0016787;hydrolase activity;6.68950663557048e-08!GO:0005643;nuclear pore;7.19930706479446e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;8.43015903082056e-08!GO:0003712;transcription cofactor activity;1.03449493705074e-07!GO:0065002;intracellular protein transport across a membrane;1.12452730761021e-07!GO:0046034;ATP metabolic process;1.25506537069734e-07!GO:0009117;nucleotide metabolic process;1.29357733965923e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.29357733965923e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.29357733965923e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.29357733965923e-07!GO:0043038;amino acid activation;1.56924820450446e-07!GO:0006418;tRNA aminoacylation for protein translation;1.56924820450446e-07!GO:0043039;tRNA aminoacylation;1.56924820450446e-07!GO:0048519;negative regulation of biological process;1.67898540072987e-07!GO:0006754;ATP biosynthetic process;2.10411447957264e-07!GO:0006753;nucleoside phosphate metabolic process;2.10411447957264e-07!GO:0009108;coenzyme biosynthetic process;2.14740292113739e-07!GO:0006323;DNA packaging;2.15432519767109e-07!GO:0019829;cation-transporting ATPase activity;2.39864388102739e-07!GO:0045333;cellular respiration;2.40765109983161e-07!GO:0006260;DNA replication;2.57134328871813e-07!GO:0044431;Golgi apparatus part;3.06511072843101e-07!GO:0050657;nucleic acid transport;4.31709972269895e-07!GO:0051236;establishment of RNA localization;4.31709972269895e-07!GO:0050658;RNA transport;4.31709972269895e-07!GO:0016491;oxidoreductase activity;4.37536012717721e-07!GO:0006403;RNA localization;4.73134117231207e-07!GO:0032446;protein modification by small protein conjugation;4.76473753929251e-07!GO:0032561;guanyl ribonucleotide binding;4.97443600288421e-07!GO:0019001;guanyl nucleotide binding;4.97443600288421e-07!GO:0006099;tricarboxylic acid cycle;4.99476571758033e-07!GO:0046356;acetyl-CoA catabolic process;4.99476571758033e-07!GO:0006752;group transfer coenzyme metabolic process;6.72201256033669e-07!GO:0000279;M phase;7.29899348275208e-07!GO:0016567;protein ubiquitination;7.29899348275208e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.43119343645856e-06!GO:0000785;chromatin;1.48227563505026e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.4965302656234e-06!GO:0006084;acetyl-CoA metabolic process;1.57493274916539e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.75632992162472e-06!GO:0015630;microtubule cytoskeleton;1.79916788392499e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.87221758309161e-06!GO:0016740;transferase activity;2.09389424900894e-06!GO:0045259;proton-transporting ATP synthase complex;2.10194097630046e-06!GO:0065004;protein-DNA complex assembly;2.49197056455995e-06!GO:0051187;cofactor catabolic process;2.53201814650243e-06!GO:0000245;spliceosome assembly;2.85651814469413e-06!GO:0046930;pore complex;2.87662605621408e-06!GO:0048522;positive regulation of cellular process;3.60441077763427e-06!GO:0043623;cellular protein complex assembly;3.61659390149342e-06!GO:0009109;coenzyme catabolic process;3.61988544720372e-06!GO:0007243;protein kinase cascade;3.940959100852e-06!GO:0031252;leading edge;5.19925652102943e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.20807192994935e-06!GO:0004298;threonine endopeptidase activity;6.2979797284951e-06!GO:0051170;nuclear import;6.31971915014259e-06!GO:0006613;cotranslational protein targeting to membrane;6.31971915014259e-06!GO:0044440;endosomal part;6.88144015857669e-06!GO:0010008;endosome membrane;6.88144015857669e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.2552630384673e-06!GO:0006333;chromatin assembly or disassembly;8.58116995004362e-06!GO:0000139;Golgi membrane;8.87205006832207e-06!GO:0016853;isomerase activity;9.60787834512096e-06!GO:0050794;regulation of cellular process;9.97517254112827e-06!GO:0009967;positive regulation of signal transduction;1.0079019160775e-05!GO:0043566;structure-specific DNA binding;1.15733526770391e-05!GO:0051028;mRNA transport;1.29381639392398e-05!GO:0031988;membrane-bound vesicle;1.38802810100177e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.50448087805454e-05!GO:0006366;transcription from RNA polymerase II promoter;1.57090975846258e-05!GO:0005762;mitochondrial large ribosomal subunit;1.73267171749756e-05!GO:0000315;organellar large ribosomal subunit;1.73267171749756e-05!GO:0005770;late endosome;1.77820801359462e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.83459643564022e-05!GO:0006606;protein import into nucleus;2.00457548650624e-05!GO:0016859;cis-trans isomerase activity;2.19738125013037e-05!GO:0000314;organellar small ribosomal subunit;2.38260170065337e-05!GO:0005763;mitochondrial small ribosomal subunit;2.38260170065337e-05!GO:0030118;clathrin coat;2.41075952467461e-05!GO:0003724;RNA helicase activity;2.57388946118045e-05!GO:0005798;Golgi-associated vesicle;2.68588994662077e-05!GO:0008654;phospholipid biosynthetic process;2.78646999825815e-05!GO:0005773;vacuole;3.27497183236251e-05!GO:0005788;endoplasmic reticulum lumen;3.27497183236251e-05!GO:0003697;single-stranded DNA binding;3.5045038864694e-05!GO:0003899;DNA-directed RNA polymerase activity;4.11409156536206e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;4.11409156536206e-05!GO:0006612;protein targeting to membrane;4.11409156536206e-05!GO:0005667;transcription factor complex;4.70262691775414e-05!GO:0043021;ribonucleoprotein binding;5.01180487908745e-05!GO:0043065;positive regulation of apoptosis;5.33224664407297e-05!GO:0031982;vesicle;5.57969625852137e-05!GO:0045454;cell redox homeostasis;5.59767039777493e-05!GO:0051789;response to protein stimulus;6.08861147349898e-05!GO:0006986;response to unfolded protein;6.08861147349898e-05!GO:0005769;early endosome;6.33389469756208e-05!GO:0007010;cytoskeleton organization and biogenesis;6.61842910968482e-05!GO:0006091;generation of precursor metabolites and energy;6.9171226522664e-05!GO:0019843;rRNA binding;7.03282171150923e-05!GO:0043068;positive regulation of programmed cell death;7.70687799402091e-05!GO:0031410;cytoplasmic vesicle;8.72982536402715e-05!GO:0006793;phosphorus metabolic process;8.90169148374696e-05!GO:0006796;phosphate metabolic process;8.90169148374696e-05!GO:0030119;AP-type membrane coat adaptor complex;9.69957334696292e-05!GO:0030867;rough endoplasmic reticulum membrane;9.80933431163711e-05!GO:0065009;regulation of a molecular function;0.000107179548959991!GO:0005813;centrosome;0.000109566627707977!GO:0006334;nucleosome assembly;0.000109927807972177!GO:0000151;ubiquitin ligase complex;0.000110962426564139!GO:0031968;organelle outer membrane;0.000119783408707089!GO:0045786;negative regulation of progression through cell cycle;0.000126010806023926!GO:0042802;identical protein binding;0.000129759587664565!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000148918066302444!GO:0019867;outer membrane;0.000154238180624013!GO:0019899;enzyme binding;0.000159126649018229!GO:0016568;chromatin modification;0.000186302418956009!GO:0000323;lytic vacuole;0.00019245927715756!GO:0005764;lysosome;0.00019245927715756!GO:0030131;clathrin adaptor complex;0.000204668368104654!GO:0008632;apoptotic program;0.000207711583273138!GO:0044452;nucleolar part;0.000209061261794858!GO:0048471;perinuclear region of cytoplasm;0.000220083220680016!GO:0016126;sterol biosynthetic process;0.000225043498993983!GO:0051427;hormone receptor binding;0.000226779047567065!GO:0008092;cytoskeletal protein binding;0.000255909393189555!GO:0005819;spindle;0.000262251524953283!GO:0016310;phosphorylation;0.000279306117292075!GO:0005885;Arp2/3 protein complex;0.000280799784462906!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000291439341125432!GO:0031497;chromatin assembly;0.000293618462911222!GO:0003713;transcription coactivator activity;0.000305418217624845!GO:0006626;protein targeting to mitochondrion;0.000334702465159078!GO:0005815;microtubule organizing center;0.000360469180505617!GO:0048518;positive regulation of biological process;0.000364021427100815!GO:0005048;signal sequence binding;0.000364021427100815!GO:0030036;actin cytoskeleton organization and biogenesis;0.000383448277120923!GO:0001726;ruffle;0.00039856892367626!GO:0030658;transport vesicle membrane;0.000418020800374513!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000418020800374513!GO:0005741;mitochondrial outer membrane;0.000418020800374513!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000421563898263788!GO:0035257;nuclear hormone receptor binding;0.00046222263421063!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000484901787068621!GO:0005905;coated pit;0.000492413708904785!GO:0005856;cytoskeleton;0.000518986534815935!GO:0031324;negative regulation of cellular metabolic process;0.000557377232924216!GO:0009165;nucleotide biosynthetic process;0.000559087427920498!GO:0006950;response to stress;0.000563915244527818!GO:0008186;RNA-dependent ATPase activity;0.000577973326617813!GO:0015980;energy derivation by oxidation of organic compounds;0.000583996137042661!GO:0051329;interphase of mitotic cell cycle;0.000583996137042661!GO:0008033;tRNA processing;0.000584178203009118!GO:0048468;cell development;0.000584522291623458!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000612480980316447!GO:0016197;endosome transport;0.000615517471529699!GO:0016044;membrane organization and biogenesis;0.000618258126825782!GO:0008250;oligosaccharyl transferase complex;0.000635895630373442!GO:0031072;heat shock protein binding;0.000673334686751497!GO:0004576;oligosaccharyl transferase activity;0.000711376072241618!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000726942591130307!GO:0043681;protein import into mitochondrion;0.000791742011942928!GO:0050662;coenzyme binding;0.000796130040346124!GO:0016363;nuclear matrix;0.000798645703578924!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000818633297293808!GO:0005791;rough endoplasmic reticulum;0.000823057667831153!GO:0051920;peroxiredoxin activity;0.000823940971581226!GO:0006839;mitochondrial transport;0.000826126175965849!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000846010422019041!GO:0006383;transcription from RNA polymerase III promoter;0.000851023521250775!GO:0051168;nuclear export;0.000968303267806639!GO:0007264;small GTPase mediated signal transduction;0.00100945084425957!GO:0006917;induction of apoptosis;0.00103283743374074!GO:0051252;regulation of RNA metabolic process;0.00109255594139778!GO:0033116;ER-Golgi intermediate compartment membrane;0.00110440581727312!GO:0003714;transcription corepressor activity;0.00110690210187354!GO:0030132;clathrin coat of coated pit;0.00114061471781365!GO:0003690;double-stranded DNA binding;0.00121239331098176!GO:0000075;cell cycle checkpoint;0.00124772979589916!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00128897324774549!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00128897324774549!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00128897324774549!GO:0006891;intra-Golgi vesicle-mediated transport;0.0012957386031735!GO:0048500;signal recognition particle;0.00130655194625864!GO:0004004;ATP-dependent RNA helicase activity;0.00137317869972335!GO:0007088;regulation of mitosis;0.00144645931620195!GO:0012502;induction of programmed cell death;0.00146445479843868!GO:0046483;heterocycle metabolic process;0.00148036248496772!GO:0030133;transport vesicle;0.00149941857810508!GO:0030660;Golgi-associated vesicle membrane;0.00151453950296092!GO:0051325;interphase;0.00156256482292398!GO:0009892;negative regulation of metabolic process;0.00159681823925428!GO:0030125;clathrin vesicle coat;0.00162574412489553!GO:0030665;clathrin coated vesicle membrane;0.00162574412489553!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00168620817753233!GO:0030029;actin filament-based process;0.00174095374816454!GO:0051087;chaperone binding;0.00175055423623206!GO:0008610;lipid biosynthetic process;0.00182114165186158!GO:0050789;regulation of biological process;0.00182280462781911!GO:0018196;peptidyl-asparagine modification;0.00183442611442636!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00183442611442636!GO:0046474;glycerophospholipid biosynthetic process;0.00203589171918736!GO:0003729;mRNA binding;0.00205327083283493!GO:0050790;regulation of catalytic activity;0.00207082175746554!GO:0006402;mRNA catabolic process;0.00223010568189641!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00224067410100859!GO:0030663;COPI coated vesicle membrane;0.00226231404966844!GO:0030126;COPI vesicle coat;0.00226231404966844!GO:0008234;cysteine-type peptidase activity;0.00233477235840547!GO:0006695;cholesterol biosynthetic process;0.00233924233506061!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00247558330952661!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00247885701505437!GO:0046489;phosphoinositide biosynthetic process;0.00260381764976447!GO:0030880;RNA polymerase complex;0.00261208319991187!GO:0008243;plasminogen activator activity;0.00273822199691096!GO:0008312;7S RNA binding;0.00283543078012594!GO:0015631;tubulin binding;0.00283951423459871!GO:0009116;nucleoside metabolic process;0.00298938908500545!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00306993210111287!GO:0045047;protein targeting to ER;0.00306993210111287!GO:0006401;RNA catabolic process;0.00306993210111287!GO:0007006;mitochondrial membrane organization and biogenesis;0.0031030663432802!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00321931717840634!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00327444498364538!GO:0006302;double-strand break repair;0.00327608511760509!GO:0016564;transcription repressor activity;0.00334177693198253!GO:0005684;U2-dependent spliceosome;0.00351270632645!GO:0006979;response to oxidative stress;0.00352672839910214!GO:0006414;translational elongation;0.00352672839910214!GO:0007051;spindle organization and biogenesis;0.00355771138437119!GO:0046467;membrane lipid biosynthetic process;0.00377858739497212!GO:0030031;cell projection biogenesis;0.00385374135851378!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00392476462629471!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00392476462629471!GO:0016563;transcription activator activity;0.00400540995029625!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00415211064489858!GO:0015399;primary active transmembrane transporter activity;0.00415211064489858!GO:0051540;metal cluster binding;0.00422426366783739!GO:0051536;iron-sulfur cluster binding;0.00422426366783739!GO:0008637;apoptotic mitochondrial changes;0.00446816721245922!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00468719158674208!GO:0006261;DNA-dependent DNA replication;0.00469485671811122!GO:0016272;prefoldin complex;0.00484442142248838!GO:0043488;regulation of mRNA stability;0.00489116842717776!GO:0043487;regulation of RNA stability;0.00489116842717776!GO:0015992;proton transport;0.0050331088953437!GO:0005874;microtubule;0.00517081759553841!GO:0030027;lamellipodium;0.00534809796731927!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00570082996181257!GO:0000428;DNA-directed RNA polymerase complex;0.00570082996181257!GO:0008139;nuclear localization sequence binding;0.00572269354835298!GO:0006818;hydrogen transport;0.00579515273680953!GO:0006417;regulation of translation;0.00591563086488728!GO:0051128;regulation of cellular component organization and biogenesis;0.00617870190178475!GO:0003684;damaged DNA binding;0.00621079005195128!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00629005429953957!GO:0035258;steroid hormone receptor binding;0.00632745069029634!GO:0008361;regulation of cell size;0.00649345536766346!GO:0051101;regulation of DNA binding;0.00649345536766346!GO:0000049;tRNA binding;0.00649963422172969!GO:0030137;COPI-coated vesicle;0.00671672328335794!GO:0003711;transcription elongation regulator activity;0.00709090850484121!GO:0017166;vinculin binding;0.00728854815400232!GO:0030134;ER to Golgi transport vesicle;0.00750811162307441!GO:0008094;DNA-dependent ATPase activity;0.00761374790178163!GO:0016408;C-acyltransferase activity;0.0076649082940844!GO:0032984;macromolecular complex disassembly;0.00790014830721116!GO:0051052;regulation of DNA metabolic process;0.00793075841128886!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00837803053401369!GO:0043624;cellular protein complex disassembly;0.00841697719163895!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00849249537140513!GO:0030127;COPII vesicle coat;0.00849850065882495!GO:0012507;ER to Golgi transport vesicle membrane;0.00849850065882495!GO:0007034;vacuolar transport;0.00849850065882495!GO:0016049;cell growth;0.00885766099508354!GO:0009112;nucleobase metabolic process;0.00893131404503201!GO:0000059;protein import into nucleus, docking;0.00893131404503201!GO:0019752;carboxylic acid metabolic process;0.00896442198635578!GO:0006082;organic acid metabolic process;0.00917328527634952!GO:0051098;regulation of binding;0.00917328527634952!GO:0005149;interleukin-1 receptor binding;0.00924616023863699!GO:0000786;nucleosome;0.00932112526910308!GO:0048487;beta-tubulin binding;0.00988156367019021!GO:0030032;lamellipodium biogenesis;0.0101066328499307!GO:0030176;integral to endoplasmic reticulum membrane;0.0102150423321127!GO:0048037;cofactor binding;0.0102150423321127!GO:0045045;secretory pathway;0.0102150423321127!GO:0030216;keratinocyte differentiation;0.0102150423321127!GO:0016481;negative regulation of transcription;0.0106522556753641!GO:0000339;RNA cap binding;0.0106522556753641!GO:0000776;kinetochore;0.0106959293479238!GO:0022406;membrane docking;0.0111521369669872!GO:0048278;vesicle docking;0.0111521369669872!GO:0030659;cytoplasmic vesicle membrane;0.0111727262687594!GO:0030521;androgen receptor signaling pathway;0.011250081494143!GO:0043022;ribosome binding;0.0115050276194742!GO:0001533;cornified envelope;0.0115552286514077!GO:0000082;G1/S transition of mitotic cell cycle;0.0115552286514077!GO:0022884;macromolecule transmembrane transporter activity;0.0116476227809382!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0116476227809382!GO:0003678;DNA helicase activity;0.0116683766882862!GO:0043154;negative regulation of caspase activity;0.0116683766882862!GO:0005832;chaperonin-containing T-complex;0.0118137410130021!GO:0008180;signalosome;0.0119862348775811!GO:0006595;polyamine metabolic process;0.0120494535108075!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0123500033945184!GO:0006650;glycerophospholipid metabolic process;0.0123960504306772!GO:0016251;general RNA polymerase II transcription factor activity;0.0128624484984579!GO:0001836;release of cytochrome c from mitochondria;0.0128624484984579!GO:0007093;mitotic cell cycle checkpoint;0.013168072580868!GO:0048146;positive regulation of fibroblast proliferation;0.0133157198965725!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0134384539653442!GO:0005862;muscle thin filament tropomyosin;0.0134384539653442!GO:0048144;fibroblast proliferation;0.0134893365726908!GO:0048145;regulation of fibroblast proliferation;0.0134893365726908!GO:0005869;dynactin complex;0.0135861768682585!GO:0030833;regulation of actin filament polymerization;0.01437814988993!GO:0008320;protein transmembrane transporter activity;0.0144754952144585!GO:0043241;protein complex disassembly;0.0146077634529192!GO:0022890;inorganic cation transmembrane transporter activity;0.0146184643211861!GO:0006289;nucleotide-excision repair;0.0151609408587874!GO:0001558;regulation of cell growth;0.0151996149538078!GO:0006310;DNA recombination;0.0152070285770664!GO:0030384;phosphoinositide metabolic process;0.0152093434398788!GO:0006904;vesicle docking during exocytosis;0.0154450576249!GO:0008022;protein C-terminus binding;0.015949365086157!GO:0003756;protein disulfide isomerase activity;0.016073488176667!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.016073488176667!GO:0000209;protein polyubiquitination;0.0161418702840487!GO:0005758;mitochondrial intermembrane space;0.0162043818252931!GO:0005657;replication fork;0.0163687956346055!GO:0007021;tubulin folding;0.0165631622677641!GO:0008283;cell proliferation;0.0166451393003181!GO:0046519;sphingoid metabolic process;0.0171237860742486!GO:0006518;peptide metabolic process;0.0171401875578751!GO:0006892;post-Golgi vesicle-mediated transport;0.017589670753041!GO:0045893;positive regulation of transcription, DNA-dependent;0.0180122508254581!GO:0008047;enzyme activator activity;0.0183136977449778!GO:0051338;regulation of transferase activity;0.0183662585791658!GO:0006352;transcription initiation;0.0185272881273901!GO:0006509;membrane protein ectodomain proteolysis;0.0185704973863848!GO:0033619;membrane protein proteolysis;0.0185704973863848!GO:0008629;induction of apoptosis by intracellular signals;0.0185917446886028!GO:0051287;NAD binding;0.0185917446886028!GO:0050750;low-density lipoprotein receptor binding;0.0186011101413332!GO:0022411;cellular component disassembly;0.0188553105671057!GO:0009166;nucleotide catabolic process;0.0189372055086468!GO:0050681;androgen receptor binding;0.0191140692102189!GO:0006118;electron transport;0.0195368559838131!GO:0004197;cysteine-type endopeptidase activity;0.0195559497761427!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0204564291876042!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0204564291876042!GO:0015002;heme-copper terminal oxidase activity;0.0204564291876042!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0204564291876042!GO:0004129;cytochrome-c oxidase activity;0.0204564291876042!GO:0006497;protein amino acid lipidation;0.0209519204391518!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.022306071381259!GO:0031902;late endosome membrane;0.0223817953868414!GO:0008538;proteasome activator activity;0.0232563897953708!GO:0031529;ruffle organization and biogenesis;0.0232563897953708!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0234224911063715!GO:0007050;cell cycle arrest;0.0239983959022896!GO:0044433;cytoplasmic vesicle part;0.0243077787659482!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.024503043103958!GO:0042158;lipoprotein biosynthetic process;0.024503043103958!GO:0006611;protein export from nucleus;0.024503043103958!GO:0009889;regulation of biosynthetic process;0.0246962438472228!GO:0007052;mitotic spindle organization and biogenesis;0.0247752144349616!GO:0016125;sterol metabolic process;0.0254207573548754!GO:0006405;RNA export from nucleus;0.025544518070021!GO:0009119;ribonucleoside metabolic process;0.025638960735476!GO:0031326;regulation of cellular biosynthetic process;0.0257956296544007!GO:0006144;purine base metabolic process;0.0257968154846497!GO:0006506;GPI anchor biosynthetic process;0.0262396626273793!GO:0006520;amino acid metabolic process;0.0262820511892237!GO:0000086;G2/M transition of mitotic cell cycle;0.0262820511892237!GO:0043284;biopolymer biosynthetic process;0.0263598330470082!GO:0032940;secretion by cell;0.026586413431421!GO:0033673;negative regulation of kinase activity;0.0267116525620523!GO:0006469;negative regulation of protein kinase activity;0.0267116525620523!GO:0031371;ubiquitin conjugating enzyme complex;0.0269086095041039!GO:0043281;regulation of caspase activity;0.0275539250721756!GO:0042770;DNA damage response, signal transduction;0.0276305606147451!GO:0051539;4 iron, 4 sulfur cluster binding;0.0281543422092164!GO:0009615;response to virus;0.0281543422092164!GO:0030433;ER-associated protein catabolic process;0.0281543422092164!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0281543422092164!GO:0006672;ceramide metabolic process;0.0282959574882517!GO:0031901;early endosome membrane;0.0293665589583271!GO:0006984;ER-nuclear signaling pathway;0.0295466930988542!GO:0000775;chromosome, pericentric region;0.0296366689251722!GO:0030100;regulation of endocytosis;0.0297694217512312!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0299770222968173!GO:0005637;nuclear inner membrane;0.0301617918506961!GO:0030041;actin filament polymerization;0.0301798738327269!GO:0035035;histone acetyltransferase binding;0.0306449132908528!GO:0046822;regulation of nucleocytoplasmic transport;0.030646495202843!GO:0016407;acetyltransferase activity;0.0308992382618888!GO:0004527;exonuclease activity;0.0312404391051839!GO:0004518;nuclease activity;0.0312404391051839!GO:0008299;isoprenoid biosynthetic process;0.0317075730700474!GO:0045334;clathrin-coated endocytic vesicle;0.0317075730700474!GO:0005669;transcription factor TFIID complex;0.0318330823128969!GO:0043549;regulation of kinase activity;0.0322045042761642!GO:0004532;exoribonuclease activity;0.0334078161465124!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0334078161465124!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0335658266119907!GO:0000178;exosome (RNase complex);0.0346167277079913!GO:0031575;G1/S transition checkpoint;0.0347068044122664!GO:0005774;vacuolar membrane;0.0347068044122664!GO:0006505;GPI anchor metabolic process;0.0347824617449729!GO:0006376;mRNA splice site selection;0.035217461632058!GO:0000389;nuclear mRNA 3'-splice site recognition;0.035217461632058!GO:0046426;negative regulation of JAK-STAT cascade;0.035217461632058!GO:0006749;glutathione metabolic process;0.035551390025687!GO:0012506;vesicle membrane;0.0367761092754398!GO:0031124;mRNA 3'-end processing;0.0374763982422747!GO:0006778;porphyrin metabolic process;0.0374763982422747!GO:0033013;tetrapyrrole metabolic process;0.0374763982422747!GO:0045936;negative regulation of phosphate metabolic process;0.0374763982422747!GO:0008426;protein kinase C inhibitor activity;0.0375962660895767!GO:0003682;chromatin binding;0.0379850981884463!GO:0051348;negative regulation of transferase activity;0.0381666434062177!GO:0043130;ubiquitin binding;0.0387865796056406!GO:0032182;small conjugating protein binding;0.0387865796056406!GO:0004674;protein serine/threonine kinase activity;0.0396353386207611!GO:0051272;positive regulation of cell motility;0.0399329479690939!GO:0040017;positive regulation of locomotion;0.0399329479690939!GO:0007017;microtubule-based process;0.0399329479690939!GO:0031625;ubiquitin protein ligase binding;0.039949774649529!GO:0051336;regulation of hydrolase activity;0.0399704115120981!GO:0007041;lysosomal transport;0.0405422254440635!GO:0031970;organelle envelope lumen;0.040707199571746!GO:0045941;positive regulation of transcription;0.0411279218663385!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0415059312691148!GO:0033043;regulation of organelle organization and biogenesis;0.0415059312691148!GO:0030508;thiol-disulfide exchange intermediate activity;0.0418192935119131!GO:0044262;cellular carbohydrate metabolic process;0.0429231410415869!GO:0005784;translocon complex;0.0436686968791964!GO:0043492;ATPase activity, coupled to movement of substances;0.0438818734299364!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0440736981645253!GO:0007242;intracellular signaling cascade;0.0441704389363745!GO:0008097;5S rRNA binding;0.0441704389363745!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0452942156413547!GO:0016584;nucleosome positioning;0.0455592203045936!GO:0046870;cadmium ion binding;0.0464024824853161!GO:0006643;membrane lipid metabolic process;0.0473192749291968!GO:0004659;prenyltransferase activity;0.0482205861548687!GO:0030911;TPR domain binding;0.0487284198699947!GO:0009303;rRNA transcription;0.0487693072753594!GO:0032508;DNA duplex unwinding;0.0489551035070914!GO:0032392;DNA geometric change;0.0489551035070914!GO:0004003;ATP-dependent DNA helicase activity;0.0496880213690559!GO:0008017;microtubule binding;0.0496880213690559!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0497538601461924!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0498700619095131!GO:0012510;trans-Golgi network transport vesicle membrane;0.0498700619095131!GO:0006007;glucose catabolic process;0.049901199775355!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0499665318357852 | |||
|sample_id=11930 | |sample_id=11930 | ||
|sample_note= | |sample_note= | ||
|sample_sex=male | |sample_sex=male | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=ANATOMICAL SYSTEM | |sample_tissue=ANATOMICAL SYSTEM | ||
|top_motifs=TP53:2.44026533975;TBX4,5:1.85872842141;TEF:1.44256695294;SNAI1..3:1.43341712795;ZEB1:1.427377201;ADNP_IRX_SIX_ZHX:1.26494775298;NKX3-2:1.22284172049;VSX1,2:1.18850955778;TEAD1:1.08442284013;NKX2-3_NKX2-5:1.07362316528;ELK1,4_GABP{A,B1}:0.931775696211;TBP:0.888921974862;NFIL3:0.856148212969;NANOG:0.85494274163;ONECUT1,2:0.782673102481;PPARG:0.774815466784;POU1F1:0.763918642004;MYOD1:0.744569274975;PAX4:0.743420472233;ALX1:0.730330342002;IRF7:0.669702856112;HSF1,2:0.668193312536;NFIX:0.630233157048;NKX2-2,8:0.629484637191;POU3F1..4:0.622159544972;FOS_FOS{B,L1}_JUN{B,D}:0.605094934049;XCPE1{core}:0.590099514743;BACH2:0.542853622822;TFCP2:0.518943019087;ZNF148:0.467031453;SOX17:0.430590017117;GFI1B:0.425766510723;HAND1,2:0.403280294415;ZNF238:0.387251768684;FOXM1:0.386711660146;FOSL2:0.368157339118;LMO2:0.36107015832;SP1:0.358262368491;NR1H4:0.357242358411;ZIC1..3:0.320354123815;NRF1:0.295738719753;ARID5B:0.277776978234;TLX2:0.251570489438;HIF1A:0.220097545636;ZNF143:0.215155661752;IKZF1:0.211404443321;PDX1:0.209911981061;GCM1,2:0.181248363249;MTF1:0.159039680739;RBPJ:0.15327277482;FOXN1:0.144836151272;KLF4:0.142809848423;GLI1..3:0.13600552642;POU6F1:0.0730049537197;TLX1..3_NFIC{dimer}:0.0681347926945;HLF:0.0680063999992;ELF1,2,4:0.0678905720823;SOX2:0.0633991376734;HES1:0.0509549938482;ALX4:0.0450974752031;MAZ:0.0441474999394;PAX5:0.0408593003353;NKX2-1,4:0.0406744019473;CDC5L:0.0376988113108;NKX3-1:0.0351185071604;NFE2:0.0226031306511;NFKB1_REL_RELA:0.0221228764937;LEF1_TCF7_TCF7L1,2:0.0198305573984;GZF1:0.0142454766737;CEBPA,B_DDIT3:0.0132739866491;NFE2L1:0.00962520460139;PAX1,9:0.00914400427241;SPZ1:-0.00110885616761;MAFB:-0.01102750816;HMX1:-0.0150363106595;STAT5{A,B}:-0.0221021229372;HMGA1,2:-0.028799681353;EVI1:-0.0335170505939;FOXO1,3,4:-0.0454213280001;GFI1:-0.0482145017234;HOX{A4,D4}:-0.0540774169386;YY1:-0.0568774470273;TFAP2{A,C}:-0.0570621791798;JUN:-0.0626528439006;UFEwm:-0.0693464304815;SOX{8,9,10}:-0.0712427750042;E2F1..5:-0.0858920317782;NFATC1..3:-0.106805650457;SMAD1..7,9:-0.127732274672;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.128208823458;ZBTB6:-0.128953603794;OCT4_SOX2{dimer}:-0.129693757733;HNF1A:-0.137107249409;IRF1,2:-0.137387573041;REST:-0.164129292369;HOX{A5,B5}:-0.16833412011;PAX2:-0.187061426918;CRX:-0.188550748325;LHX3,4:-0.21148590894;bHLH_family:-0.212999890933;NFY{A,B,C}:-0.222455381728;ATF4:-0.223014000387;NHLH1,2:-0.232367032646;SRF:-0.232866735881;FOXA2:-0.237173456935;EN1,2:-0.244398611449;MYBL2:-0.25497416809;ETS1,2:-0.25894190383;PITX1..3:-0.275421020522;PAX6:-0.276503722148;T:-0.279299477673;NR5A1,2:-0.280927474081;EBF1:-0.285937219487;ATF5_CREB3:-0.291436275684;RFX2..5_RFXANK_RFXAP:-0.303067496257;MYB:-0.309127831895;STAT1,3:-0.338464846598;RUNX1..3:-0.344628183838;NR6A1:-0.35722991236;PAX8:-0.364499315743;SPI1:-0.390812465578;TFDP1:-0.394424563083;GATA6:-0.399561078772;POU2F1..3:-0.399670794218;MTE{core}:-0.402593499116;ATF2:-0.409696910917;SPIB:-0.409778096864;PRRX1,2:-0.412753271991;GTF2I:-0.415077393629;EP300:-0.424491885497;AHR_ARNT_ARNT2:-0.436409845565;FOXQ1:-0.438358655979;TFAP4:-0.460464439772;MYFfamily:-0.464652096543;HNF4A_NR2F1,2:-0.476896349311;AR:-0.481338922535;GTF2A1,2:-0.482217946746;FOX{F1,F2,J1}:-0.486230866416;RFX1:-0.494830718706;HOX{A6,A7,B6,B7}:-0.499480881936;FOXL1:-0.537695977475;NR3C1:-0.548443970865;NFE2L2:-0.551688507641;PRDM1:-0.557166420521;FOX{I1,J2}:-0.567703361714;FOXP3:-0.568889706874;CDX1,2,4:-0.577308709212;CUX2:-0.581909887975;CREB1:-0.592696512059;ZBTB16:-0.609361009176;DBP:-0.610259910728;MEF2{A,B,C,D}:-0.625511794085;HOXA9_MEIS1:-0.638404668852;MED-1{core}:-0.645351974562;TOPORS:-0.655303900585;ZNF423:-0.665135792542;ZFP161:-0.665458482978;RXR{A,B,G}:-0.673432646162;ZNF384:-0.681870238912;STAT2,4,6:-0.695513796676;POU5F1:-0.73816703281;NKX6-1,2:-0.787181331768;HIC1:-0.787841094127;TAL1_TCF{3,4,12}:-0.834695106263;PBX1:-0.877947906874;RREB1:-0.88704865113;MZF1:-0.908916261883;ATF6:-0.912636249011;TFAP2B:-0.913569410323;SREBF1,2:-0.937788574825;GATA4:-0.949265697507;TGIF1:-0.956238182212;FOX{D1,D2}:-0.96553079287;RORA:-0.966300981884;BPTF:-1.01562094221;AIRE:-1.02325633789;ESRRA:-1.03098982849;PAX3,7:-1.03192353753;DMAP1_NCOR{1,2}_SMARC:-1.03363373894;NANOG{mouse}:-1.04249275303;RXRA_VDR{dimer}:-1.12141898709;HBP1_HMGB_SSRP1_UBTF:-1.15562701282;EGR1..3:-1.17063464438;SOX5:-1.1882751349;FOXP1:-1.18883633455;PATZ1:-1.26178542477;ESR1:-1.29973423698;XBP1:-1.31059357344;FOXD3:-1.33914546843;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.42651801706;IKZF2:-1.48568867179;BREu{core}:-1.60191646019 | |top_motifs=TP53:2.44026533975;TBX4,5:1.85872842141;TEF:1.44256695294;SNAI1..3:1.43341712795;ZEB1:1.427377201;ADNP_IRX_SIX_ZHX:1.26494775298;NKX3-2:1.22284172049;VSX1,2:1.18850955778;TEAD1:1.08442284013;NKX2-3_NKX2-5:1.07362316528;ELK1,4_GABP{A,B1}:0.931775696211;TBP:0.888921974862;NFIL3:0.856148212969;NANOG:0.85494274163;ONECUT1,2:0.782673102481;PPARG:0.774815466784;POU1F1:0.763918642004;MYOD1:0.744569274975;PAX4:0.743420472233;ALX1:0.730330342002;IRF7:0.669702856112;HSF1,2:0.668193312536;NFIX:0.630233157048;NKX2-2,8:0.629484637191;POU3F1..4:0.622159544972;FOS_FOS{B,L1}_JUN{B,D}:0.605094934049;XCPE1{core}:0.590099514743;BACH2:0.542853622822;TFCP2:0.518943019087;ZNF148:0.467031453;SOX17:0.430590017117;GFI1B:0.425766510723;HAND1,2:0.403280294415;ZNF238:0.387251768684;FOXM1:0.386711660146;FOSL2:0.368157339118;LMO2:0.36107015832;SP1:0.358262368491;NR1H4:0.357242358411;ZIC1..3:0.320354123815;NRF1:0.295738719753;ARID5B:0.277776978234;TLX2:0.251570489438;HIF1A:0.220097545636;ZNF143:0.215155661752;IKZF1:0.211404443321;PDX1:0.209911981061;GCM1,2:0.181248363249;MTF1:0.159039680739;RBPJ:0.15327277482;FOXN1:0.144836151272;KLF4:0.142809848423;GLI1..3:0.13600552642;POU6F1:0.0730049537197;TLX1..3_NFIC{dimer}:0.0681347926945;HLF:0.0680063999992;ELF1,2,4:0.0678905720823;SOX2:0.0633991376734;HES1:0.0509549938482;ALX4:0.0450974752031;MAZ:0.0441474999394;PAX5:0.0408593003353;NKX2-1,4:0.0406744019473;CDC5L:0.0376988113108;NKX3-1:0.0351185071604;NFE2:0.0226031306511;NFKB1_REL_RELA:0.0221228764937;LEF1_TCF7_TCF7L1,2:0.0198305573984;GZF1:0.0142454766737;CEBPA,B_DDIT3:0.0132739866491;NFE2L1:0.00962520460139;PAX1,9:0.00914400427241;SPZ1:-0.00110885616761;MAFB:-0.01102750816;HMX1:-0.0150363106595;STAT5{A,B}:-0.0221021229372;HMGA1,2:-0.028799681353;EVI1:-0.0335170505939;FOXO1,3,4:-0.0454213280001;GFI1:-0.0482145017234;HOX{A4,D4}:-0.0540774169386;YY1:-0.0568774470273;TFAP2{A,C}:-0.0570621791798;JUN:-0.0626528439006;UFEwm:-0.0693464304815;SOX{8,9,10}:-0.0712427750042;E2F1..5:-0.0858920317782;NFATC1..3:-0.106805650457;SMAD1..7,9:-0.127732274672;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.128208823458;ZBTB6:-0.128953603794;OCT4_SOX2{dimer}:-0.129693757733;HNF1A:-0.137107249409;IRF1,2:-0.137387573041;REST:-0.164129292369;HOX{A5,B5}:-0.16833412011;PAX2:-0.187061426918;CRX:-0.188550748325;LHX3,4:-0.21148590894;bHLH_family:-0.212999890933;NFY{A,B,C}:-0.222455381728;ATF4:-0.223014000387;NHLH1,2:-0.232367032646;SRF:-0.232866735881;FOXA2:-0.237173456935;EN1,2:-0.244398611449;MYBL2:-0.25497416809;ETS1,2:-0.25894190383;PITX1..3:-0.275421020522;PAX6:-0.276503722148;T:-0.279299477673;NR5A1,2:-0.280927474081;EBF1:-0.285937219487;ATF5_CREB3:-0.291436275684;RFX2..5_RFXANK_RFXAP:-0.303067496257;MYB:-0.309127831895;STAT1,3:-0.338464846598;RUNX1..3:-0.344628183838;NR6A1:-0.35722991236;PAX8:-0.364499315743;SPI1:-0.390812465578;TFDP1:-0.394424563083;GATA6:-0.399561078772;POU2F1..3:-0.399670794218;MTE{core}:-0.402593499116;ATF2:-0.409696910917;SPIB:-0.409778096864;PRRX1,2:-0.412753271991;GTF2I:-0.415077393629;EP300:-0.424491885497;AHR_ARNT_ARNT2:-0.436409845565;FOXQ1:-0.438358655979;TFAP4:-0.460464439772;MYFfamily:-0.464652096543;HNF4A_NR2F1,2:-0.476896349311;AR:-0.481338922535;GTF2A1,2:-0.482217946746;FOX{F1,F2,J1}:-0.486230866416;RFX1:-0.494830718706;HOX{A6,A7,B6,B7}:-0.499480881936;FOXL1:-0.537695977475;NR3C1:-0.548443970865;NFE2L2:-0.551688507641;PRDM1:-0.557166420521;FOX{I1,J2}:-0.567703361714;FOXP3:-0.568889706874;CDX1,2,4:-0.577308709212;CUX2:-0.581909887975;CREB1:-0.592696512059;ZBTB16:-0.609361009176;DBP:-0.610259910728;MEF2{A,B,C,D}:-0.625511794085;HOXA9_MEIS1:-0.638404668852;MED-1{core}:-0.645351974562;TOPORS:-0.655303900585;ZNF423:-0.665135792542;ZFP161:-0.665458482978;RXR{A,B,G}:-0.673432646162;ZNF384:-0.681870238912;STAT2,4,6:-0.695513796676;POU5F1:-0.73816703281;NKX6-1,2:-0.787181331768;HIC1:-0.787841094127;TAL1_TCF{3,4,12}:-0.834695106263;PBX1:-0.877947906874;RREB1:-0.88704865113;MZF1:-0.908916261883;ATF6:-0.912636249011;TFAP2B:-0.913569410323;SREBF1,2:-0.937788574825;GATA4:-0.949265697507;TGIF1:-0.956238182212;FOX{D1,D2}:-0.96553079287;RORA:-0.966300981884;BPTF:-1.01562094221;AIRE:-1.02325633789;ESRRA:-1.03098982849;PAX3,7:-1.03192353753;DMAP1_NCOR{1,2}_SMARC:-1.03363373894;NANOG{mouse}:-1.04249275303;RXRA_VDR{dimer}:-1.12141898709;HBP1_HMGB_SSRP1_UBTF:-1.15562701282;EGR1..3:-1.17063464438;SOX5:-1.1882751349;FOXP1:-1.18883633455;PATZ1:-1.26178542477;ESR1:-1.29973423698;XBP1:-1.31059357344;FOXD3:-1.33914546843;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.42651801706;IKZF2:-1.48568867179;BREu{core}:-1.60191646019 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11930-125I4;search_select_hide=table117:FF:11930-125I4 | |||
}} | }} | ||
Latest revision as of 18:29, 4 June 2020
| Name: | Mallassez-derived cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13551 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13551
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13551
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.794 |
| 10 | 10 | 0.766 |
| 100 | 100 | 0.682 |
| 101 | 101 | 0.139 |
| 102 | 102 | 0.261 |
| 103 | 103 | 0.0825 |
| 104 | 104 | 0.839 |
| 105 | 105 | 0.509 |
| 106 | 106 | 0.923 |
| 107 | 107 | 0.743 |
| 108 | 108 | 0.899 |
| 109 | 109 | 0.00205 |
| 11 | 11 | 0.365 |
| 110 | 110 | 0.163 |
| 111 | 111 | 0.232 |
| 112 | 112 | 0.345 |
| 113 | 113 | 0.121 |
| 114 | 114 | 0.0841 |
| 115 | 115 | 0.714 |
| 116 | 116 | 0.648 |
| 117 | 117 | 0.161 |
| 118 | 118 | 0.543 |
| 119 | 119 | 0.841 |
| 12 | 12 | 0.844 |
| 120 | 120 | 0.0405 |
| 121 | 121 | 0.231 |
| 122 | 122 | 0.29 |
| 123 | 123 | 0.114 |
| 124 | 124 | 0.054 |
| 125 | 125 | 0.497 |
| 126 | 126 | 0.102 |
| 127 | 127 | 0.0709 |
| 128 | 128 | 0.678 |
| 129 | 129 | 0.11 |
| 13 | 13 | 0.00351 |
| 130 | 130 | 0.924 |
| 131 | 131 | 0.808 |
| 132 | 132 | 0.639 |
| 133 | 133 | 0.00111 |
| 134 | 134 | 0.373 |
| 135 | 135 | 0.702 |
| 136 | 136 | 0.00894 |
| 137 | 137 | 0.09 |
| 138 | 138 | 0.423 |
| 139 | 139 | 0.19 |
| 14 | 14 | 0.928 |
| 140 | 140 | 0.79 |
| 141 | 141 | 0.346 |
| 142 | 142 | 0.721 |
| 143 | 143 | 0.798 |
| 144 | 144 | 0.256 |
| 145 | 145 | 0.643 |
| 146 | 146 | 0.153 |
| 147 | 147 | 0.548 |
| 148 | 148 | 0.709 |
| 149 | 149 | 0.965 |
| 15 | 15 | 0.915 |
| 150 | 150 | 0.323 |
| 151 | 151 | 0.64 |
| 152 | 152 | 0.0211 |
| 153 | 153 | 0.628 |
| 154 | 154 | 0.764 |
| 155 | 155 | 0.625 |
| 156 | 156 | 0.601 |
| 157 | 157 | 0.104 |
| 158 | 158 | 0.0975 |
| 159 | 159 | 0.605 |
| 16 | 16 | 0.0203 |
| 160 | 160 | 0.723 |
| 161 | 161 | 0.239 |
| 162 | 162 | 0.698 |
| 163 | 163 | 0.937 |
| 164 | 164 | 0.871 |
| 165 | 165 | 0.443 |
| 166 | 166 | 0.635 |
| 167 | 167 | 0.692 |
| 168 | 168 | 0.12 |
| 169 | 169 | 0.0929 |
| 17 | 17 | 0.391 |
| 18 | 18 | 0.485 |
| 19 | 19 | 0.884 |
| 2 | 2 | 0.229 |
| 20 | 20 | 0.895 |
| 21 | 21 | 0.956 |
| 22 | 22 | 0.914 |
| 23 | 23 | 0.915 |
| 24 | 24 | 0.00309 |
| 25 | 25 | 0.531 |
| 26 | 26 | 0.886 |
| 27 | 27 | 0.501 |
| 28 | 28 | 0.459 |
| 29 | 29 | 0.491 |
| 3 | 3 | 0.605 |
| 30 | 30 | 0.0753 |
| 31 | 31 | 0.864 |
| 32 | 32 | 0.0525 |
| 33 | 33 | 0.0551 |
| 34 | 34 | 0.79 |
| 35 | 35 | 0.0966 |
| 36 | 36 | 0.732 |
| 37 | 37 | 0.0617 |
| 38 | 38 | 0.67 |
| 39 | 39 | 0.318 |
| 4 | 4 | 0.649 |
| 40 | 40 | 0.0153 |
| 41 | 41 | 0.465 |
| 42 | 42 | 0.385 |
| 43 | 43 | 0.983 |
| 44 | 44 | 0.561 |
| 45 | 45 | 0.0873 |
| 46 | 46 | 0.959 |
| 47 | 47 | 0.129 |
| 48 | 48 | 0.0846 |
| 49 | 49 | 0.335 |
| 5 | 5 | 0.703 |
| 50 | 50 | 0.429 |
| 51 | 51 | 0.919 |
| 52 | 52 | 0.372 |
| 53 | 53 | 0.313 |
| 54 | 54 | 0.915 |
| 55 | 55 | 0.299 |
| 56 | 56 | 0.272 |
| 57 | 57 | 0.542 |
| 58 | 58 | 0.669 |
| 59 | 59 | 0.544 |
| 6 | 6 | 0.388 |
| 60 | 60 | 0.305 |
| 61 | 61 | 0.795 |
| 62 | 62 | 0.918 |
| 63 | 63 | 0.207 |
| 64 | 64 | 0.935 |
| 65 | 65 | 0.808 |
| 66 | 66 | 0.398 |
| 67 | 67 | 0.777 |
| 68 | 68 | 0.343 |
| 69 | 69 | 0.676 |
| 7 | 7 | 0.147 |
| 70 | 70 | 0.448 |
| 71 | 71 | 0.271 |
| 72 | 72 | 0.627 |
| 73 | 73 | 0.00447 |
| 74 | 74 | 0.0791 |
| 75 | 75 | 0.247 |
| 76 | 76 | 0.787 |
| 77 | 77 | 0.0491 |
| 78 | 78 | 0.00228 |
| 79 | 79 | 0.576 |
| 8 | 8 | 0.43 |
| 80 | 80 | 0.666 |
| 81 | 81 | 0.173 |
| 82 | 82 | 0.555 |
| 83 | 83 | 0.97 |
| 84 | 84 | 0.508 |
| 85 | 85 | 0.792 |
| 86 | 86 | 0.985 |
| 87 | 87 | 0.00149 |
| 88 | 88 | 0.715 |
| 89 | 89 | 0.0291 |
| 9 | 9 | 0.7 |
| 90 | 90 | 0.49 |
| 91 | 91 | 0.751 |
| 92 | 92 | 0.753 |
| 93 | 93 | 0.083 |
| 94 | 94 | 0.851 |
| 95 | 95 | 0.0245 |
| 96 | 96 | 0.876 |
| 97 | 97 | 0.655 |
| 98 | 98 | 0.904 |
| 99 | 99 | 0.388 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13551
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000087 human Malassez derived epithelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002159 (general ecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0002166 (epithelial cell of Malassez)
UBERON: Anatomy
0000468 (multi-cellular organism)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000075 (subdivision of skeletal system)
0004765 (skeletal element)
0001708 (jaw skeleton)
0011159 (primary subdivision of cranial skeletal system)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0008895 (splanchnocranium)
0011137 (axial skeletal system)
0010323 (cranial skeletal system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000087 (human Malassez derived epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000221 (ectodermal cell)
