FFCP PHASE1:Hg19::chr10:105845952..105845992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1308 | |EntrezGene=1308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2194 | |HGNC=2194 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMD9 | |UniProt=Q9UMD9 | ||
|association_with_transcript=-192bp_to_ENST00000353479,ENST00000369733_5end | |association_with_transcript=-192bp_to_ENST00000353479,ENST00000369733_5end | ||
|cluster_id=chr10:105845952..105845992,- | |||
|description=CAGE_peak_4_at_COL17A1_5end | |description=CAGE_peak_4_at_COL17A1_5end | ||
|id=chr10:105845952..105845992,- | |id=chr10:105845952..105845992,- | ||
|ontology_enrichment_celltype=CL:0000066!7.78e-28!254;CL:0002076!1.27e-27!43;CL:0000223!4.68e-24!59;CL:0002251!6.23e-17!21;CL:0002368!1.14e-13!13;CL:0002159!1.19e-13!13;CL:0000622!2.66e-10!5;CL:0000244!3.92e-09!4;CL:0000731!3.92e-09!4;CL:0000076!1.07e-08!62;CL:0000154!1.73e-08!6;CL:0002202!1.68e-07!9;CL:0002632!1.68e-07!9;CL:0002541!2.40e-07!3;CL:0002623!5.67e-07!3;CL:0002166!6.77e-07!3;CL:0002621!7.91e-07!3 | |ontology_enrichment_celltype=CL:0000066!7.78e-28!254;CL:0002076!1.27e-27!43;CL:0000223!4.68e-24!59;CL:0002251!6.23e-17!21;CL:0002368!1.14e-13!13;CL:0002159!1.19e-13!13;CL:0000622!2.66e-10!5;CL:0000244!3.92e-09!4;CL:0000731!3.92e-09!4;CL:0000076!1.07e-08!62;CL:0000154!1.73e-08!6;CL:0002202!1.68e-07!9;CL:0002632!1.68e-07!9;CL:0002541!2.40e-07!3;CL:0002623!5.67e-07!3;CL:0002166!6.77e-07!3;CL:0002621!7.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.03e-22;13!CL:0002076;3.49e-21;42!CL:0002159;1.09e-20;14!CL:0000349;3.29e-19;19!CL:0000622;4.52e-16;5!CL:0000244;3.19e-14;4!CL:0000731;3.19e-14;4!CL:0000154;2.42e-13;6!CL:0002202;3.87e-12;9!CL:0002632;3.87e-12;9!CL:0002541;3.43e-11;3!CL:0002623;1.21e-10;3!CL:0002166;1.68e-10;3!CL:0002621;1.74e-10;3!CL:0002328;4.02e-10;3!CL:0002577;9.13e-10;3!CL:0002251;1.95e-09;20!CL:0002077;2.55e-09;34!CL:0000150;8.70e-09;9!CL:0000240;1.07e-08;6!CL:0000311;1.07e-08;6!CL:0000079;1.07e-08;6!CL:0000237;1.07e-08;6!CL:0000362;2.50e-08;9!CL:0002536;3.86e-08;2!CL:0002327;5.79e-08;4!CL:0000575;1.67e-07;2!CL:0000317;3.98e-07;2!CL:1000448;3.98e-07;2!CL:0002308;3.98e-07;2!CL:0002140;3.98e-07;2!CL:0002537;8.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.95e-27,253;CL:0002076,9.58e-26,42;CL:0002368,1.23e-22,13;CL:0002159,7.65e-21,14;CL:0000349,3.43e-19,19;CL:0000223,4.35e-19,58;CL:0000622,3.29e-16,5;CL:0000244,2.99e-14,4;CL:0000731,2.99e-14,4;CL:0000154,1.86e-13,6;CL:0002202,3.50e-12,9;CL:0002632,3.50e-12,9;CL:0002541,2.90e-11,3;CL:0002077,8.84e-11,34;CL:0002623,1.22e-10,3;CL:0002166,1.63e-10,3;CL:0002621,2.12e-10,3;CL:0002328,4.02e-10,3;CL:0002577,1.17e-09,3;CL:0002251,2.06e-09,20;CL:0000150,7.34e-09,9;CL:0000240,1.07e-08,6;CL:0000311,1.07e-08,6;CL:0000079,1.07e-08,6;CL:0000237,1.07e-08,6;CL:0000036,1.07e-08,6;CL:0000357,1.07e-08,6;CL:0000114,1.07e-08,6;CL:0000362,2.12e-08,9;CL:0002536,3.67e-08,2;CL:0002327,6.38e-08,4;CL:0000575,1.41e-07,2;CL:0000317,2.89e-07,2;CL:1000448,2.89e-07,2;CL:0002308,2.89e-07,2;CL:0002140,2.89e-07,2;CL:0002537,8.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.71e-10;58!CL:0000357;1.07e-08;6!CL:0000114;1.07e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!2.67e-22!14;DOID:305!1.01e-10!106;DOID:0050687!1.24e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.15e-19!14;UBERON:0000158!2.15e-19!14;UBERON:0004119!4.04e-17!169;UBERON:0000925!4.04e-17!169;UBERON:0006595!4.04e-17!169;UBERON:0003124!8.31e-14!7;UBERON:0000365!1.32e-10!5;UBERON:0001004!2.16e-10!72;UBERON:0000166!4.22e-10!21;UBERON:0000478!6.30e-10!24;UBERON:0000161!1.69e-09!35;UBERON:0001007!4.54e-09!155;UBERON:0001555!4.54e-09!155;UBERON:0007026!4.54e-09!155;UBERON:0003729!5.50e-09!5;UBERON:0005910!9.82e-09!6;UBERON:0004923!2.16e-08!57;UBERON:0000165!2.35e-08!28;UBERON:0000930!2.35e-08!28;UBERON:0000077!2.47e-08!130;UBERON:0000344!3.00e-08!12;UBERON:0001987!3.85e-08!4;UBERON:0004340!3.85e-08!4;UBERON:0000305!9.81e-08!7;UBERON:0000476!2.40e-07!3;UBERON:0000920!2.40e-07!3;UBERON:0003343!4.51e-07!4;UBERON:0004785!4.51e-07!4;UBERON:0005911!6.93e-07!82;UBERON:0001949!7.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.78e-21;10!UBERON:0000158;2.78e-21;10!UBERON:0000478;1.43e-17;24!UBERON:0000365;8.10e-17;5!UBERON:0000486;1.43e-16;12!UBERON:0005910;5.86e-14;6!UBERON:0001987;9.65e-13;4!UBERON:0000305;2.08e-12;7!UBERON:0003124;3.43e-11;3!UBERON:0000920;3.43e-11;3!UBERON:0001949;1.74e-10;3!UBERON:0004815;4.02e-10;3!UBERON:0002031;4.02e-10;3!UBERON:0005911;5.56e-10;36!UBERON:0004807;3.90e-08;22!UBERON:0001708;5.66e-08;4!UBERON:0008895;5.66e-08;4!UBERON:0001911;5.79e-08;4!UBERON:0002419;3.98e-07;2!UBERON:0007771;3.98e-07;2!UBERON:0003297;3.98e-07;2!UBERON:0001821;3.98e-07;2!UBERON:0003487;3.98e-07;2!UBERON:0001820;3.98e-07;2!UBERON:0007196;5.10e-07;15!UBERON:0001558;5.10e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.26e-32,14;UBERON:0000158,4.26e-32,14;UBERON:0003124,4.31e-22,7;UBERON:0000478,1.54e-17,24;UBERON:0000365,1.02e-16,5;UBERON:0005910,7.09e-14,6;UBERON:0001987,1.37e-12,4;UBERON:0004340,1.37e-12,4;UBERON:0004119,1.44e-12,160;UBERON:0000925,1.44e-12,160;UBERON:0006595,1.44e-12,160;UBERON:0000305,2.04e-12,7;UBERON:0004923,1.18e-11,66;UBERON:0000920,2.90e-11,3;UBERON:0004871,8.16e-11,8;UBERON:0001949,2.12e-10,3;UBERON:0004815,4.02e-10,3;UBERON:0002031,4.02e-10,3;UBERON:0001004,1.67e-08,74;UBERON:0003102,5.45e-08,99;UBERON:0001708,5.53e-08,4;UBERON:0008895,5.53e-08,4;UBERON:0001911,6.38e-08,4;UBERON:0005333,6.38e-08,4;UBERON:0008425,6.38e-08,4;UBERON:0005311,6.38e-08,4;UBERON:0005911,1.90e-07,82;UBERON:0005157,2.76e-07,47;UBERON:0002419,2.89e-07,2;UBERON:0007771,2.89e-07,2;UBERON:0003297,2.89e-07,2;UBERON:0001821,2.89e-07,2;UBERON:0003487,2.89e-07,2;UBERON:0001820,2.89e-07,2;UBERON:0005089,2.89e-07,2;UBERON:0005088,2.89e-07,2;UBERON:0007196,4.81e-07,15;UBERON:0001558,4.81e-07,15;UBERON:0005153,9.59e-07,37 | |||
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|short_description=p4@COL17A1 | |short_description=p4@COL17A1 | ||
}} | }} |
Latest revision as of 05:03, 16 September 2015
Short description: | p4@COL17A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL17A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -192bp_to_ENST00000353479, ENST00000369733_5end |
EntrezGene: | COL17A1 |
HGNC: | 2194 |
UniProt: | Q9UMD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data