FFCP PHASE1:Hg19::chr12:45649620..45649624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:45649620..45649624,+ | |||
|description=CAGE_peak_at_chr12:45649620..45649624,+ | |description=CAGE_peak_at_chr12:45649620..45649624,+ | ||
|id=chr12:45649620..45649624,+ | |id=chr12:45649620..45649624,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.64e-09!42;CL:0000860!1.28e-08!45;CL:0002009!4.45e-08!65;CL:0002194!4.22e-07!63;CL:0000576!4.22e-07!63;CL:0000040!4.22e-07!63;CL:0000559!4.22e-07!63 | |ontology_enrichment_celltype=CL:0002057!4.64e-09!42;CL:0000860!1.28e-08!45;CL:0002009!4.45e-08!65;CL:0002194!4.22e-07!63;CL:0000576!4.22e-07!63;CL:0000040!4.22e-07!63;CL:0000559!4.22e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0001014;7.52e-14;2!CL:0001016;7.52e-14;2!CL:0000860;1.04e-09;33!CL:0002057;1.04e-09;33!CL:0002591;2.34e-07;1!CL:0000473;3.81e-07;39!CL:0000234;3.81e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.10e-14,2;CL:0001016,7.10e-14,2;CL:0000860,2.21e-10,42;CL:0002057,2.21e-10,42;CL:0002009,5.06e-10,61;CL:0000557,5.83e-09,67;CL:0000473,6.67e-09,48;CL:0000234,6.67e-09,48;CL:0002591,3.20e-07,1;CL:0002194,7.79e-07,59;CL:0000576,7.79e-07,59;CL:0000040,7.79e-07,59;CL:0000559,7.79e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-08;42!UBERON:0005754;9.08e-08;1!UBERON:0005425;2.34e-07;1!UBERON:0004874;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102;UBERON:0002193!8.97e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.08e-08;1!UBERON:0000996;9.08e-08;1!UBERON:0006868;9.08e-08;1!UBERON:0002426;9.08e-08;1!UBERON:0003831;9.08e-08;1!UBERON:0003898;9.08e-08;1!UBERON:0004830;9.08e-08;1!UBERON:0003830;9.08e-08;1!UBERON:0005175;9.08e-08;1!UBERON:0001774;9.08e-08;1!UBERON:0001103;9.08e-08;1!UBERON:0006834;2.34e-07;1!UBERON:0000989;2.34e-07;1!UBERON:0000941;2.34e-07;1!UBERON:0001785;2.34e-07;1!UBERON:0002464;2.34e-07;1!UBERON:0004904;2.34e-07;1!UBERON:0008811;2.34e-07;1!UBERON:0001021;2.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,8.54e-08,1;UBERON:0002426,9.10e-08,1;UBERON:0003831,9.10e-08,1;UBERON:0003898,9.10e-08,1;UBERON:0004830,9.10e-08,1;UBERON:0003830,9.10e-08,1;UBERON:0005175,9.10e-08,1;UBERON:0001774,9.10e-08,1;UBERON:0001103,9.10e-08,1;UBERON:0010084,9.10e-08,1;UBERON:0000998,1.03e-07,1;UBERON:0006868,1.03e-07,1;UBERON:0002371,1.11e-07,76;UBERON:0000989,1.51e-07,1;UBERON:0008811,1.51e-07,1;UBERON:0006258,1.51e-07,1;UBERON:0005876,1.51e-07,1;UBERON:0004874,1.51e-07,1;UBERON:0000941,1.72e-07,1;UBERON:0001785,1.72e-07,1;UBERON:0002464,1.72e-07,1;UBERON:0004904,1.72e-07,1;UBERON:0001021,1.72e-07,1;UBERON:0003902,1.72e-07,1;UBERON:0005425,1.72e-07,1;UBERON:0006834,3.40e-07,1;UBERON:0001474,5.52e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0.568676929949686,0.293600439334847,0.553995408531877,1.20326668482085,0,0,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,1.7931249457037,0.236482229888585,0.689491361473237,4.51839278508678,1.35426486594342,0,0.545812300115692,0.224723484445085,0.612167784741805,1.92557416245656,1.27867425159808,0.659702600373432,0.997318288108159,0.852449501065388,0.870627715885752,1.70215567407342,0,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,1.47311054395026,0.949387162322653,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0.541607727530031,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0.522389211897802,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.673588117878509,0.563057402416611,0,0,0.549605231791222,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.201504196455281,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0,0,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0,0,1.08006287447623,0.79312517629427,0,0,0.490080431962063,0,0,0.142283686696828,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0.338583555603207,0,0.201799707191048,0,0,0.614481528616916,0.671028323677248,0.166849141711909,0,0,1.23087398947712,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0.996239941255349,0,0,0.306806047506464,0.246169610922139,0,0.449341755736634,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0.349839999984783,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0.46112780877612,0.269272933229316,0.325942115766024,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0.189753732724185,0,1.05499032264014,0,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,2.40773294189637,0,0,0,0,0.789168805698781,4.83962864194656,0.61214552326098,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.873633341210151,0.687944129886466,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0.686379991447858,0.432164393964449,0.372757606696298,0,0,0.209205692624666,0,0.866851769704557,0.600420288709789,0.136905378891993,0,0.429765441419957,0.262887354279314,0.558564802544508,0.916641696046735,0.717873024576814,0.798716001995964,0,0,0.201550417460179,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0,0,0.137539436597234,0.415440338029185,2.69968669861801,2.32140586367385,0.0607495566580247,0,0.0788057072991982,0.20981835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| ||
|short_description=p@chr12:45649620..45649624,+ | |short_description=p@chr12:45649620..45649624,+ | ||
}} | }} |
Latest revision as of 08:35, 24 July 2015
Short description: | p@chr12:45649620..45649624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45649620..45649624, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.10e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.10e-14 | 2 |
classical monocyte | 2.21e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-10 | 42 |
macrophage dendritic cell progenitor | 5.06e-10 | 61 |
granulocyte monocyte progenitor cell | 5.83e-09 | 67 |
defensive cell | 6.67e-09 | 48 |
phagocyte | 6.67e-09 | 48 |
smooth muscle cell of the pulmonary artery | 3.20e-07 | 1 |
monopoietic cell | 7.79e-07 | 59 |
monocyte | 7.79e-07 | 59 |
monoblast | 7.79e-07 | 59 |
promonocyte | 7.79e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
vagina | 8.54e-08 | 1 |
chest muscle | 9.10e-08 | 1 |
respiratory system muscle | 9.10e-08 | 1 |
skeletal muscle of trunk | 9.10e-08 | 1 |
respiratory system skeletal muscle | 9.10e-08 | 1 |
thoracic segment muscle | 9.10e-08 | 1 |
chest organ | 9.10e-08 | 1 |
muscle of trunk | 9.10e-08 | 1 |
diaphragm | 9.10e-08 | 1 |
future diaphragm | 9.10e-08 | 1 |
seminal vesicle | 1.03e-07 | 1 |
seminal fluid secreting gland | 1.03e-07 | 1 |
bone marrow | 1.11e-07 | 76 |
penis | 1.51e-07 | 1 |
intromittent organ | 1.51e-07 | 1 |
lateral plate mesenchyme | 1.51e-07 | 1 |
undifferentiated genital tubercle | 1.51e-07 | 1 |
somatopleure | 1.51e-07 | 1 |
cranial nerve II | 1.72e-07 | 1 |
cranial nerve | 1.72e-07 | 1 |
nerve trunk | 1.72e-07 | 1 |
nerve connecting eye with brain | 1.72e-07 | 1 |
nerve | 1.72e-07 | 1 |
retinal neural layer | 1.72e-07 | 1 |
presumptive neural retina | 1.72e-07 | 1 |
uterus or analog | 3.40e-07 | 1 |
bone element | 5.52e-07 | 82 |