FFCP PHASE1:Hg19::chr13:111086779..111086789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111086779..111086789,- | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:111086779..111086789,- | |description=CAGE_peak_at_chr13:111086779..111086789,- | ||
|id=chr13:111086779..111086789,- | |id=chr13:111086779..111086789,- | ||
|ontology_enrichment_celltype=CL:0000222!3.83e-14!119;CL:0000055!8.82e-13!180;CL:0000183!1.74e-12!59;CL:1000449!6.04e-10!16;CL:0000680!7.33e-10!57;CL:0000056!7.33e-10!57;CL:0000355!7.33e-10!57;CL:0000187!1.32e-09!54;CL:1000507!5.32e-09!12;CL:1000494!5.32e-09!12;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:1000497!4.14e-08!18;CL:0002518!4.14e-08!18;CL:0002681!1.15e-07!13;CL:0002584!1.15e-07!13;CL:0000192!1.66e-07!42;CL:0000514!1.66e-07!42 | |ontology_enrichment_celltype=CL:0000222!3.83e-14!119;CL:0000055!8.82e-13!180;CL:0000183!1.74e-12!59;CL:1000449!6.04e-10!16;CL:0000680!7.33e-10!57;CL:0000056!7.33e-10!57;CL:0000355!7.33e-10!57;CL:0000187!1.32e-09!54;CL:1000507!5.32e-09!12;CL:1000494!5.32e-09!12;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:1000497!4.14e-08!18;CL:0002518!4.14e-08!18;CL:0002681!1.15e-07!13;CL:0002584!1.15e-07!13;CL:0000192!1.66e-07!42;CL:0000514!1.66e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.54e-16;15!CL:1000497;5.00e-14;17!CL:0002518;5.00e-14;17!CL:1000507;1.36e-11;10!CL:1000494;1.36e-11;10!CL:0002681;2.65e-11;12!CL:0002584;2.65e-11;12!CL:1000746;7.61e-10;7!CL:1000612;7.61e-10;7!CL:0000669;3.83e-09;4!CL:0002595;7.11e-09;5!CL:0002138;2.61e-08;6!CL:0000115;5.90e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.16e-16,15;CL:1000497,2.54e-14,17;CL:0002518,2.54e-14,17;CL:1000507,1.03e-11,10;CL:1000494,1.03e-11,10;CL:0002681,1.43e-11,12;CL:0002584,1.43e-11,12;CL:1000746,5.06e-10,7;CL:1000612,5.06e-10,7;CL:0000669,4.29e-09,4;CL:0002595,1.30e-08,5;CL:0000222,3.85e-08,121;CL:0005020,5.60e-08,6;CL:0002138,5.60e-08,6;CL:0005022,5.60e-08,6;CL:0000115,1.76e-07,36;CL:0002078,4.23e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.61e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.56e-16!118;UBERON:0002049!1.70e-14!79;UBERON:0007798!1.70e-14!79;UBERON:0001009!2.74e-13!113;UBERON:0004535!5.45e-13!110;UBERON:0004872!3.75e-12!84;UBERON:0000055!1.44e-11!69;UBERON:0005256!4.26e-11!143;UBERON:0001981!3.98e-10!60;UBERON:0007500!3.98e-10!60;UBERON:0004537!3.98e-10!60;UBERON:0006965!3.98e-10!60;UBERON:0006555!4.78e-10!17;UBERON:0005103!4.78e-10!17;UBERON:0000083!4.78e-10!17;UBERON:0009201!4.78e-10!17;UBERON:0004819!4.78e-10!17;UBERON:0006553!4.78e-10!17;UBERON:0003074!4.78e-10!17;UBERON:0003060!4.78e-10!17;UBERON:0004211!6.04e-10!16;UBERON:0001285!6.04e-10!16;UBERON:0007684!6.04e-10!16;UBERON:0003220!6.04e-10!16;UBERON:0004208!6.04e-10!16;UBERON:0001134!8.08e-10!61;UBERON:0002036!8.08e-10!61;UBERON:0003082!8.08e-10!61;UBERON:0002385!1.14e-09!63;UBERON:0001015!1.14e-09!63;UBERON:0000383!1.14e-09!63;UBERON:0000080!4.23e-09!18;UBERON:0002120!4.23e-09!18;UBERON:0004875!4.23e-09!18;UBERON:0005721!4.23e-09!18;UBERON:0005754!4.23e-09!18;UBERON:0007297!4.23e-09!18;UBERON:0003103!5.11e-09!69;UBERON:0009773!5.32e-09!12;UBERON:0001231!5.32e-09!12;UBERON:0004810!5.32e-09!12;UBERON:0004876!9.59e-09!20;UBERON:0003887!9.64e-09!21;UBERON:0000914!3.72e-08!83;UBERON:0002329!3.72e-08!83;UBERON:0003077!3.72e-08!83;UBERON:0003059!3.72e-08!83;UBERON:0007282!3.72e-08!83;UBERON:0009618!3.72e-08!83;UBERON:0007285!3.72e-08!83;UBERON:0003104!3.88e-08!238;UBERON:0009142!3.88e-08!238;UBERON:0000353!4.09e-08!17;UBERON:0004290!5.98e-08!70;UBERON:0002100!7.96e-08!216;UBERON:0000481!8.74e-08!347;UBERON:0000490!1.07e-07!138;UBERON:0001225!1.15e-07!13;UBERON:0008987!1.15e-07!13;UBERON:0000486!1.30e-07!82;UBERON:0000477!1.67e-07!286;UBERON:0001637!1.92e-07!42;UBERON:0003509!1.92e-07!42;UBERON:0004572!1.92e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.54e-16;15!UBERON:0004819;2.54e-16;15!UBERON:0001285;2.54e-16;15!UBERON:0007684;2.54e-16;15!UBERON:0004211;1.36e-11;10!UBERON:0009773;1.36e-11;10!UBERON:0001231;1.36e-11;10!UBERON:0004810;1.36e-11;10!UBERON:0001225;2.65e-11;12!UBERON:0008987;2.65e-11;12!UBERON:0000353;7.66e-11;15!UBERON:0000074;7.61e-10;7!UBERON:0001229;7.61e-10;7!UBERON:0006554;3.56e-09;30!UBERON:0001008;3.56e-09;30!UBERON:0002113;4.75e-09;24!UBERON:0011143;4.75e-09;24!UBERON:0003513;5.87e-09;7!UBERON:0003834;7.11e-09;5!UBERON:0001533;7.11e-09;5!UBERON:0001851;1.18e-08;15!UBERON:0003914;1.85e-07;74!UBERON:0000489;5.33e-07;29 | |||
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| ||
|short_description=p@chr13:111086779..111086789,- | |short_description=p@chr13:111086779..111086789,- | ||
}} | }} |
Latest revision as of 14:32, 24 July 2015
Short description: | p@chr13:111086779..111086789, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111086779..111086789, - |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.16e-16 | 15 |
kidney cell | 2.54e-14 | 17 |
kidney epithelial cell | 2.54e-14 | 17 |
kidney tubule cell | 1.03e-11 | 10 |
nephron tubule epithelial cell | 1.03e-11 | 10 |
kidney cortical cell | 1.43e-11 | 12 |
renal cortical epithelial cell | 1.43e-11 | 12 |
glomerular cell | 5.06e-10 | 7 |
kidney corpuscule cell | 5.06e-10 | 7 |
pericyte cell | 4.29e-09 | 4 |
smooth muscle cell of the subclavian artery | 1.30e-08 | 5 |
mesodermal cell | 3.85e-08 | 121 |
lymphangioblast | 5.60e-08 | 6 |
endothelial cell of lymphatic vessel | 5.60e-08 | 6 |
vascular lymphangioblast | 5.60e-08 | 6 |
endothelial cell | 1.76e-07 | 36 |
meso-epithelial cell | 4.23e-07 | 45 |