FFCP PHASE1:Hg19::chr17:37894179..37894202,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.47e-37!254;CL:0000223!7.72e-16!59;CL:0002076!2.68e-15!43;CL:0002251!2.07e-08!21 | |ontology_enrichment_celltype=CL:0000066!1.47e-37!254;CL:0000223!7.72e-16!59;CL:0002076!2.68e-15!43;CL:0002251!2.07e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.16e-14;42!CL:0002251;1.70e-10;20!CL:1000507;1.03e-08;10!CL:1000494;1.03e-08;10!CL:0000039;4.16e-08;7!CL:0000586;4.16e-08;7!CL:1000497;1.36e-07;17!CL:0002518;1.36e-07;17 | |ontology_enrichment_celltype_v019=CL:0002076;1.16e-14;42!CL:0002251;1.70e-10;20!CL:1000507;1.03e-08;10!CL:1000494;1.03e-08;10!CL:0000039;4.16e-08;7!CL:0000586;4.16e-08;7!CL:1000497;1.36e-07;17!CL:0002518;1.36e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.04e-42,253;CL:0000223,1.88e-19,58;CL:0002076,8.31e-19,42;CL:0002251,1.14e-10,20;CL:1000507,1.15e-08,10;CL:1000494,1.15e-08,10;CL:0000039,4.01e-08,7;CL:0000586,4.01e-08,7;CL:1000497,1.37e-07,17;CL:0002518,1.37e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;4.60e-10;58!UBERON:0006595;2.73e-09;86!UBERON:0001041;3.97e-09;30 | |ontology_enrichment_development_v019=CL:0000223;4.60e-10;58!UBERON:0006595;2.73e-09;86!UBERON:0001041;3.97e-09;30 | ||
|ontology_enrichment_disease=DOID:305!1.38e-29!106;DOID:0050687!1.52e-20!143;DOID:299!7.51e-11!25;DOID:1749!4.47e-08!14;DOID:162!8.16e-08!235;DOID:14566!1.47e-07!239 | |ontology_enrichment_disease=DOID:305!1.38e-29!106;DOID:0050687!1.52e-20!143;DOID:299!7.51e-11!25;DOID:1749!4.47e-08!14;DOID:162!8.16e-08!235;DOID:14566!1.47e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:299;2.58e-12;25!DOID:305;3.13e-11;106!DOID:1749;6.81e-11;14 | |ontology_enrichment_disease_v019=DOID:299;2.58e-12;25!DOID:305;3.13e-11;106!DOID:1749;6.81e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,7.64e-33,106;DOID:0050687,8.77e-24,143;DOID:299,1.89e-12,25;DOID:1749,6.35e-11,14;DOID:162,4.15e-09,235;DOID:14566,1.79e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.22e-24!169;UBERON:0000925!3.22e-24!169;UBERON:0006595!3.22e-24!169;UBERON:0001007!1.19e-20!155;UBERON:0001555!1.19e-20!155;UBERON:0007026!1.19e-20!155;UBERON:0004921!4.92e-19!129;UBERON:0004185!4.92e-19!129;UBERON:0000077!1.21e-17!130;UBERON:0000466!7.14e-16!126;UBERON:0000464!2.81e-15!104;UBERON:0001041!8.31e-14!98;UBERON:0000062!8.42e-14!511;UBERON:0000481!1.06e-12!347;UBERON:0001004!2.28e-12!72;UBERON:0005177!5.49e-12!107;UBERON:0000064!8.76e-12!219;UBERON:0001048!1.26e-10!168;UBERON:0002553!6.43e-10!70;UBERON:0000065!8.73e-10!53;UBERON:0001008!1.48e-09!45;UBERON:0005911!2.08e-09!82;UBERON:0006554!2.65e-09!44;UBERON:0000922!3.42e-09!612;UBERON:0000468!6.88e-09!659;UBERON:0005156!1.04e-08!59;UBERON:0000990!1.04e-08!59;UBERON:0003104!1.32e-08!238;UBERON:0009142!1.32e-08!238;UBERON:0008947!2.28e-08!38;UBERON:0003258!2.28e-08!38;UBERON:0003133!3.39e-08!48;UBERON:0009569!3.67e-08!113;UBERON:0003886!5.68e-08!63;UBERON:0005153!1.55e-07!37;UBERON:0000072!1.67e-07!46;UBERON:0002050!2.62e-07!605;UBERON:0005423!2.62e-07!605;UBERON:0000161!2.66e-07!35;UBERON:0000923!4.18e-07!604;UBERON:0005291!4.18e-07!604;UBERON:0006598!4.18e-07!604;UBERON:0002532!4.18e-07!604;UBERON:0000160!4.31e-07!27;UBERON:0005409!4.75e-07!35;UBERON:0000344!5.52e-07!12;UBERON:0000467!5.83e-07!625;UBERON:0000480!7.67e-07!626;UBERON:0003064!8.59e-07!37;UBERON:0004175!9.39e-07!25;UBERON:0002113!9.58e-07!27;UBERON:0003918!9.58e-07!27;UBERON:0005095!9.58e-07!27;UBERON:0007687!9.58e-07!27;UBERON:0000058!9.80e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!3.22e-24!169;UBERON:0000925!3.22e-24!169;UBERON:0006595!3.22e-24!169;UBERON:0001007!1.19e-20!155;UBERON:0001555!1.19e-20!155;UBERON:0007026!1.19e-20!155;UBERON:0004921!4.92e-19!129;UBERON:0004185!4.92e-19!129;UBERON:0000077!1.21e-17!130;UBERON:0000466!7.14e-16!126;UBERON:0000464!2.81e-15!104;UBERON:0001041!8.31e-14!98;UBERON:0000062!8.42e-14!511;UBERON:0000481!1.06e-12!347;UBERON:0001004!2.28e-12!72;UBERON:0005177!5.49e-12!107;UBERON:0000064!8.76e-12!219;UBERON:0001048!1.26e-10!168;UBERON:0002553!6.43e-10!70;UBERON:0000065!8.73e-10!53;UBERON:0001008!1.48e-09!45;UBERON:0005911!2.08e-09!82;UBERON:0006554!2.65e-09!44;UBERON:0000922!3.42e-09!612;UBERON:0000468!6.88e-09!659;UBERON:0005156!1.04e-08!59;UBERON:0000990!1.04e-08!59;UBERON:0003104!1.32e-08!238;UBERON:0009142!1.32e-08!238;UBERON:0008947!2.28e-08!38;UBERON:0003258!2.28e-08!38;UBERON:0003133!3.39e-08!48;UBERON:0009569!3.67e-08!113;UBERON:0003886!5.68e-08!63;UBERON:0005153!1.55e-07!37;UBERON:0000072!1.67e-07!46;UBERON:0002050!2.62e-07!605;UBERON:0005423!2.62e-07!605;UBERON:0000161!2.66e-07!35;UBERON:0000923!4.18e-07!604;UBERON:0005291!4.18e-07!604;UBERON:0006598!4.18e-07!604;UBERON:0002532!4.18e-07!604;UBERON:0000160!4.31e-07!27;UBERON:0005409!4.75e-07!35;UBERON:0000344!5.52e-07!12;UBERON:0000467!5.83e-07!625;UBERON:0000480!7.67e-07!626;UBERON:0003064!8.59e-07!37;UBERON:0004175!9.39e-07!25;UBERON:0002113!9.58e-07!27;UBERON:0003918!9.58e-07!27;UBERON:0005095!9.58e-07!27;UBERON:0007687!9.58e-07!27;UBERON:0000058!9.80e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.29e-09;30!UBERON:0001008;1.29e-09;30!UBERON:0004921;4.59e-09;33!UBERON:0004211;1.03e-08;10!UBERON:0009773;1.03e-08;10!UBERON:0001231;1.03e-08;10!UBERON:0004810;1.03e-08;10!UBERON:0005178;1.70e-07;34!UBERON:0002224;1.70e-07;34!UBERON:0005181;7.40e-07;35!UBERON:0000344;7.55e-07;20!UBERON:0005911;8.56e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0006554;1.29e-09;30!UBERON:0001008;1.29e-09;30!UBERON:0004921;4.59e-09;33!UBERON:0004211;1.03e-08;10!UBERON:0009773;1.03e-08;10!UBERON:0001231;1.03e-08;10!UBERON:0004810;1.03e-08;10!UBERON:0005178;1.70e-07;34!UBERON:0002224;1.70e-07;34!UBERON:0005181;7.40e-07;35!UBERON:0000344;7.55e-07;20!UBERON:0005911;8.56e-07;36 | ||
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| ||
|short_description=p3@GRB7 | |short_description=p3@GRB7 | ||
}} | }} |
Revision as of 13:29, 19 November 2012
Short description: | p3@GRB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GRB7_5end |
Coexpression cluster: | C3629_clear_serous_papillotubular_testicular_signet_breast_esophagus |
Association with transcript: | 0bp_to_ENST00000309156, ENST00000309185, ENST00000485182, uc002hsr.2_5end |
EntrezGene: | GRB7 |
HGNC: | 4567 |
UniProt: | Q14451 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.04e-42 | 253 |
endodermal cell | 1.88e-19 | 58 |
endo-epithelial cell | 8.31e-19 | 42 |
epithelial cell of alimentary canal | 1.14e-10 | 20 |
kidney tubule cell | 1.15e-08 | 10 |
nephron tubule epithelial cell | 1.15e-08 | 10 |
germ line cell | 4.01e-08 | 7 |
germ cell | 4.01e-08 | 7 |
kidney cell | 1.37e-07 | 17 |
kidney epithelial cell | 1.37e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.52e-22 | 160 |
endoderm | 3.52e-22 | 160 |
presumptive endoderm | 3.52e-22 | 160 |
digestive system | 2.16e-18 | 145 |
digestive tract | 2.16e-18 | 145 |
primitive gut | 2.16e-18 | 145 |
subdivision of digestive tract | 4.69e-18 | 118 |
trunk region element | 1.03e-16 | 101 |
renal system | 5.18e-13 | 48 |
urinary system structure | 1.16e-12 | 47 |
foregut | 6.93e-12 | 87 |
respiratory system | 1.46e-11 | 74 |
subdivision of trunk | 1.02e-10 | 112 |
endo-epithelium | 2.37e-10 | 82 |
epithelial bud | 1.61e-09 | 37 |
respiratory tract | 9.38e-09 | 54 |
orifice | 1.06e-08 | 36 |
nephron tubule epithelium | 1.15e-08 | 10 |
thoracic cavity element | 1.67e-08 | 34 |
thoracic cavity | 1.67e-08 | 34 |
thoracic segment organ | 4.44e-08 | 35 |
epithelial fold | 9.37e-08 | 47 |
respiratory primordium | 9.92e-08 | 38 |
endoderm of foregut | 9.92e-08 | 38 |
kidney | 1.23e-07 | 26 |
kidney mesenchyme | 1.23e-07 | 26 |
upper urinary tract | 1.23e-07 | 26 |
kidney rudiment | 1.23e-07 | 26 |
kidney field | 1.23e-07 | 26 |
cavitated compound organ | 1.91e-07 | 31 |
reproductive structure | 2.26e-07 | 59 |
reproductive system | 2.26e-07 | 59 |
mucosa | 6.48e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.64e-33 | 106 |
cell type cancer | 8.77e-24 | 143 |
adenocarcinoma | 1.89e-12 | 25 |
squamous cell carcinoma | 6.35e-11 | 14 |
cancer | 4.15e-09 | 235 |
disease of cellular proliferation | 1.79e-08 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.