FFCP PHASE1:Hg19::chr10:89864117..89864135,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:89864117..89864135,-|id=chr10:89864117..89864135,-|ontology_enrichment_celltype=CL:0002057!9.06e-29!42;CL:0000860!2.01e-26!45;CL:0000766!5.25e-23!76;CL:0000738!2.21e-21!140;CL:0002087!1.39e-17!119;CL:0002194!1.02e-16!63;CL:0000576!1.02e-16!63;CL:0000040!1.02e-16!63;CL:0000559!1.02e-16!63;CL:0002009!5.03e-16!65;CL:0000037!1.73e-15!172;CL:0000566!1.73e-15!172;CL:0002032!1.75e-15!165;CL:0000837!1.75e-15!165;CL:0002031!2.66e-15!124;CL:0000839!1.80e-14!70;CL:0000557!3.47e-14!71;CL:0000988!4.42e-14!182;CL:0000094!2.09e-13!8;CL:0000763!3.41e-13!112;CL:0000049!3.41e-13!112;CL:0000775!3.22e-10!3;CL:0000081!1.64e-09!11;CL:0000771!2.17e-07!2|ontology_enrichment_celltype_v019=CL:0000094;4.88e-25;8!CL:0000775;9.82e-25;3!CL:0000081;3.52e-18;11!CL:0000771;3.57e-17;2!CL:0000860;2.69e-10;33!CL:0002057;2.69e-10;33!CL:0000576;1.65e-07;48!CL:0000473;3.96e-07;39!CL:0000234;3.96e-07;39|ontology_enrichment_celltype_v019_2=CL:0000094,4.77e-25,8;CL:0000775,9.45e-25,3;CL:0000081,3.46e-18,11;CL:0000771,3.57e-17,2;CL:0000766,2.02e-15,72;CL:0000860,2.47e-10,42;CL:0002057,2.47e-10,42;CL:0000738,8.37e-10,136;CL:0000763,1.46e-09,108;CL:0000049,1.46e-09,108;CL:0000473,6.52e-09,48;CL:0000234,6.52e-09,48;CL:0002032,7.21e-08,161;CL:0000837,7.21e-08,161;CL:0000037,1.98e-07,168;CL:0002194,6.37e-07,59;CL:0000576,6.37e-07,59;CL:0000040,6.37e-07,59;CL:0000559,6.37e-07,59;CL:0000988,6.45e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.15e-24!102;UBERON:0003061!2.15e-24!102;UBERON:0002193!5.52e-23!112;UBERON:0000178!1.60e-18!15;UBERON:0000179!1.60e-18!15;UBERON:0000463!1.60e-18!15;UBERON:0007023!2.77e-14!115;UBERON:0002371!5.92e-12!80;UBERON:0001474!9.87e-11!86;UBERON:0002405!3.71e-10!115;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0003081!3.68e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;6.61e-41;15!UBERON:0000179;6.61e-41;15!UBERON:0000463;6.61e-41;15!UBERON:0002390;1.07e-20;32!UBERON:0002193;9.75e-15;42!UBERON:0000029;8.16e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.78e-41,15;UBERON:0000179,6.78e-41,15;UBERON:0000463,6.78e-41,15;UBERON:0002193,7.23e-22,108;UBERON:0002390,1.02e-21,98;UBERON:0003061,1.02e-21,98;UBERON:0000029,5.75e-09,1;UBERON:0003081,7.71e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.66198622559563,0.601633342410425,0.651032612147555,0,0,0,1.45398238779565,0.377875943688809,1.21292030593908,0.697287110717054,0.411167888021826,0.309706370895104,0,0,1.18241114944293,0.689491361473237,0,5.41705946377367,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,1.27867425159808,0.580418477257168,1.13477044938228,0,1.00499466102697,0.521482918420201,0.868755378820466,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,3.74792179657038,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4409502769828,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.6854565565669,26.9245313283622,89.9281664156197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,26.3872756800728,29.0562138714103,18.2287099895732,23.3467139948633,25.9158232044302,35.6660321155995,29.1616976108582,24.5868804651224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0.628817220398664,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,1.2217909337381,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr10:89864117..89864135,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:89864117..89864135,- | |||
|id=chr10:89864117..89864135,- | |||
|ontology_enrichment_celltype=CL:0002057!9.06e-29!42;CL:0000860!2.01e-26!45;CL:0000766!5.25e-23!76;CL:0000738!2.21e-21!140;CL:0002087!1.39e-17!119;CL:0002194!1.02e-16!63;CL:0000576!1.02e-16!63;CL:0000040!1.02e-16!63;CL:0000559!1.02e-16!63;CL:0002009!5.03e-16!65;CL:0000037!1.73e-15!172;CL:0000566!1.73e-15!172;CL:0002032!1.75e-15!165;CL:0000837!1.75e-15!165;CL:0002031!2.66e-15!124;CL:0000839!1.80e-14!70;CL:0000557!3.47e-14!71;CL:0000988!4.42e-14!182;CL:0000094!2.09e-13!8;CL:0000763!3.41e-13!112;CL:0000049!3.41e-13!112;CL:0000775!3.22e-10!3;CL:0000081!1.64e-09!11;CL:0000771!2.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.88e-25;8!CL:0000775;9.82e-25;3!CL:0000081;3.52e-18;11!CL:0000771;3.57e-17;2!CL:0000860;2.69e-10;33!CL:0002057;2.69e-10;33!CL:0000576;1.65e-07;48!CL:0000473;3.96e-07;39!CL:0000234;3.96e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.77e-25,8;CL:0000775,9.45e-25,3;CL:0000081,3.46e-18,11;CL:0000771,3.57e-17,2;CL:0000766,2.02e-15,72;CL:0000860,2.47e-10,42;CL:0002057,2.47e-10,42;CL:0000738,8.37e-10,136;CL:0000763,1.46e-09,108;CL:0000049,1.46e-09,108;CL:0000473,6.52e-09,48;CL:0000234,6.52e-09,48;CL:0002032,7.21e-08,161;CL:0000837,7.21e-08,161;CL:0000037,1.98e-07,168;CL:0002194,6.37e-07,59;CL:0000576,6.37e-07,59;CL:0000040,6.37e-07,59;CL:0000559,6.37e-07,59;CL:0000988,6.45e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.15e-24!102;UBERON:0003061!2.15e-24!102;UBERON:0002193!5.52e-23!112;UBERON:0000178!1.60e-18!15;UBERON:0000179!1.60e-18!15;UBERON:0000463!1.60e-18!15;UBERON:0007023!2.77e-14!115;UBERON:0002371!5.92e-12!80;UBERON:0001474!9.87e-11!86;UBERON:0002405!3.71e-10!115;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0003081!3.68e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.61e-41;15!UBERON:0000179;6.61e-41;15!UBERON:0000463;6.61e-41;15!UBERON:0002390;1.07e-20;32!UBERON:0002193;9.75e-15;42!UBERON:0000029;8.16e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.78e-41,15;UBERON:0000179,6.78e-41,15;UBERON:0000463,6.78e-41,15;UBERON:0002193,7.23e-22,108;UBERON:0002390,1.02e-21,98;UBERON:0003061,1.02e-21,98;UBERON:0000029,5.75e-09,1;UBERON:0003081,7.71e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.66198622559563,0.601633342410425,0.651032612147555,0,0,0,1.45398238779565,0.377875943688809,1.21292030593908,0.697287110717054,0.411167888021826,0.309706370895104,0,0,1.18241114944293,0.689491361473237,0,5.41705946377367,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,1.27867425159808,0.580418477257168,1.13477044938228,0,1.00499466102697,0.521482918420201,0.868755378820466,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,3.74792179657038,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4409502769828,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.6854565565669,26.9245313283622,89.9281664156197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,26.3872756800728,29.0562138714103,18.2287099895732,23.3467139948633,25.9158232044302,35.6660321155995,29.1616976108582,24.5868804651224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0.628817220398664,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,1.2217909337381,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:89864117..89864135,- | |||
}} |
Revision as of 14:49, 10 September 2013
Short description: | p@chr10:89864117..89864135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:89864117..89864135, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.77e-25 | 8 |
neutrophil | 9.45e-25 | 3 |
blood cell | 3.46e-18 | 11 |
eosinophil | 3.57e-17 | 2 |
myeloid leukocyte | 2.02e-15 | 72 |
classical monocyte | 2.47e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.47e-10 | 42 |
leukocyte | 8.37e-10 | 136 |
myeloid cell | 1.46e-09 | 108 |
common myeloid progenitor | 1.46e-09 | 108 |
defensive cell | 6.52e-09 | 48 |
phagocyte | 6.52e-09 | 48 |
hematopoietic oligopotent progenitor cell | 7.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.21e-08 | 161 |
hematopoietic stem cell | 1.98e-07 | 168 |
monopoietic cell | 6.37e-07 | 59 |
monocyte | 6.37e-07 | 59 |
monoblast | 6.37e-07 | 59 |
promonocyte | 6.37e-07 | 59 |
hematopoietic cell | 6.45e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 6.78e-41 | 15 |
haemolymphatic fluid | 6.78e-41 | 15 |
organism substance | 6.78e-41 | 15 |
hemolymphoid system | 7.23e-22 | 108 |
hematopoietic system | 1.02e-21 | 98 |
blood island | 1.02e-21 | 98 |
lymph node | 5.75e-09 | 1 |
lateral plate mesoderm | 7.71e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.