FFCP PHASE1:Hg19::chr10:104154415..104154434,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4791|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7795|TSSclassifier=S|UniProt=Q00653|association_with_transcript=61bp_to_ENST00000369966_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_NFKB2_5end|id=chr10:104154415..104154434,+|ontology_enrichment_celltype=CL:0000738!4.51e-44!140;CL:0002057!5.20e-33!42;CL:0002087!4.43e-31!119;CL:0002031!7.98e-31!124;CL:0000860!1.79e-30!45;CL:0000037!7.70e-29!172;CL:0000566!7.70e-29!172;CL:0000766!3.90e-28!76;CL:0000988!5.02e-28!182;CL:0002032!1.27e-24!165;CL:0000837!1.27e-24!165;CL:0000557!8.67e-23!71;CL:0002009!9.03e-23!65;CL:0002194!3.71e-21!63;CL:0000576!3.71e-21!63;CL:0000040!3.71e-21!63;CL:0000559!3.71e-21!63;CL:0000839!1.33e-20!70;CL:0000763!1.27e-15!112;CL:0000049!1.27e-15!112;CL:0000134!4.99e-13!358;CL:0002320!1.55e-12!365;CL:0000048!6.06e-10!430;CL:0000034!1.18e-09!444;CL:0000723!1.98e-09!436;CL:0000219!2.44e-09!390;CL:0000838!3.99e-09!52;CL:0002393!8.52e-09!9;CL:0002397!8.52e-09!9;CL:0000542!9.69e-09!53;CL:0000051!9.69e-09!53;CL:0000094!1.30e-08!8;CL:0000081!9.97e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.07e-41;33!CL:0002057;1.07e-41;33!CL:0000576;4.22e-33;48!CL:0000473;1.33e-30;39!CL:0000234;1.33e-30;39!CL:0000766;2.43e-29;69!CL:0000094;4.37e-18;8!CL:0002087;2.94e-17;104!CL:0000738;3.77e-15;136!CL:0002393;9.27e-14;6!CL:0002397;9.27e-14;6!CL:0000081;1.17e-12;11!CL:0000763;8.84e-12;100!CL:0000988;4.17e-11;177!CL:0000451;3.99e-09;10!CL:0000219;9.87e-09;193!CL:0000784;5.60e-08;3!CL:0000775;5.85e-08;3!CL:0000623;7.32e-08;3!CL:0000767;2.09e-07;3!CL:0000226;2.27e-07;3!CL:0000842;2.27e-07;3!CL:0000453;5.00e-07;5|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-78,136;CL:0000766,5.73e-63,72;CL:0000860,1.62e-62,42;CL:0002057,1.62e-62,42;CL:0000037,5.04e-61,168;CL:0000988,7.06e-57,177;CL:0000473,4.29e-56,48;CL:0000234,4.29e-56,48;CL:0002031,1.46e-53,120;CL:0002032,1.07e-52,161;CL:0000837,1.07e-52,161;CL:0002087,2.11e-52,115;CL:0000557,8.02e-51,67;CL:0002009,4.93e-49,61;CL:0000839,3.78e-46,66;CL:0002194,3.20e-45,59;CL:0000576,3.20e-45,59;CL:0000040,3.20e-45,59;CL:0000559,3.20e-45,59;CL:0000763,1.03e-44,108;CL:0000049,1.03e-44,108;CL:0000134,1.11e-25,354;CL:0002320,9.26e-25,361;CL:0000219,1.59e-21,386;CL:0002393,1.67e-18,9;CL:0002397,1.67e-18,9;CL:0000094,4.48e-18,8;CL:0000034,6.43e-18,441;CL:0000048,1.40e-17,427;CL:0000723,4.88e-17,433;CL:0000081,1.19e-12,11;CL:0000451,3.28e-09,10;CL:0000838,1.28e-08,52;CL:0000542,2.27e-08,53;CL:0000051,2.27e-08,53;CL:0000784,5.54e-08,3;CL:0000775,5.80e-08,3;CL:0000623,7.09e-08,3;CL:0000825,7.09e-08,3;CL:0000767,2.16e-07,3;CL:0000226,2.20e-07,3;CL:0000842,2.20e-07,3;CL:0000453,3.93e-07,5|ontology_enrichment_development_v019=CL:0002057;2.42e-43;42!CL:0000049;7.41e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.19e-22!102;UBERON:0003061!2.19e-22!102;UBERON:0002371!1.31e-21!80;UBERON:0001474!3.84e-20!86;UBERON:0002193!2.52e-19!112;UBERON:0004765!8.35e-18!101;UBERON:0001434!8.35e-18!101;UBERON:0002405!2.84e-14!115;UBERON:0002384!2.44e-11!375;UBERON:0002204!3.58e-09!167;UBERON:0003081!4.97e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.37e-45,76;UBERON:0001474,5.33e-43,82;UBERON:0002390,1.37e-39,98;UBERON:0003061,1.37e-39,98;UBERON:0004765,5.56e-38,90;UBERON:0002405,2.24e-36,93;UBERON:0002193,1.33e-34,108;UBERON:0001434,7.69e-33,100;UBERON:0002384,1.66e-23,371;UBERON:0002204,1.73e-14,167;UBERON:0003081,9.25e-13,203|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.236132343941038,14.5544782434094,7.29275856384704,5.26374819274658,0,0,0,0,0.284338464974843,1.17440175733939,24.9297933839345,32.488200490163,21.0500544594376,0,0,0,0.726991193897824,0.755751887377619,3.39617685662943,3.71886459049095,4.52284676824008,7.43295290148249,2.01384674625505,2.30544635876191,4.25668013799453,7.92915065694223,4.51839278508678,5.41705946377367,2.82363509313907,2.45615535052061,6.29225756446237,10.1007684482398,6.09765151444578,14.0654167675789,0.989553900560148,0.997318288108159,2.98357325372886,7.54544020434318,6.80862269629368,21.1759564658495,1.25624332628372,1.0429658368404,2.82345498116652,7.26479403160043,8.10210799172642,15.8231193720442,7.81644559354185,10.4176106982871,5.2414661377094,2.47122988522289,2.4028302854641,1.28580469357664,2.56511469367124,2.78483348078726,2.00930569141097,0,0,0.889509253863555,3.41384178053206,0,1.14950487990897,0,0,9.67662047486062,9.39579502993502,12.6150165281326,3.96513985737078,9.52864557068611,0.263384084775077,3.73748563216283,4.71612915298998,10.896879446974,0.334372990781356,0.651844533267181,0,1.94826728407911,2.00538822393312,0.294605907474837,0,0.541607727530031,2.0494611156108,3.12142434143708,0.328875809207352,0.5527000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2375,0,0,0,0,0,0,0.193766729508018,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0.747091421144008,0,0,0,0.122241444182866,0,0,0,0|short_description=p5@NFKB2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7795 | |||
|TSSclassifier=S | |||
|UniProt=Q00653 | |||
|association_with_transcript=61bp_to_ENST00000369966_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_NFKB2_5end | |||
|id=chr10:104154415..104154434,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.51e-44!140;CL:0002057!5.20e-33!42;CL:0002087!4.43e-31!119;CL:0002031!7.98e-31!124;CL:0000860!1.79e-30!45;CL:0000037!7.70e-29!172;CL:0000566!7.70e-29!172;CL:0000766!3.90e-28!76;CL:0000988!5.02e-28!182;CL:0002032!1.27e-24!165;CL:0000837!1.27e-24!165;CL:0000557!8.67e-23!71;CL:0002009!9.03e-23!65;CL:0002194!3.71e-21!63;CL:0000576!3.71e-21!63;CL:0000040!3.71e-21!63;CL:0000559!3.71e-21!63;CL:0000839!1.33e-20!70;CL:0000763!1.27e-15!112;CL:0000049!1.27e-15!112;CL:0000134!4.99e-13!358;CL:0002320!1.55e-12!365;CL:0000048!6.06e-10!430;CL:0000034!1.18e-09!444;CL:0000723!1.98e-09!436;CL:0000219!2.44e-09!390;CL:0000838!3.99e-09!52;CL:0002393!8.52e-09!9;CL:0002397!8.52e-09!9;CL:0000542!9.69e-09!53;CL:0000051!9.69e-09!53;CL:0000094!1.30e-08!8;CL:0000081!9.97e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-41;33!CL:0002057;1.07e-41;33!CL:0000576;4.22e-33;48!CL:0000473;1.33e-30;39!CL:0000234;1.33e-30;39!CL:0000766;2.43e-29;69!CL:0000094;4.37e-18;8!CL:0002087;2.94e-17;104!CL:0000738;3.77e-15;136!CL:0002393;9.27e-14;6!CL:0002397;9.27e-14;6!CL:0000081;1.17e-12;11!CL:0000763;8.84e-12;100!CL:0000988;4.17e-11;177!CL:0000451;3.99e-09;10!CL:0000219;9.87e-09;193!CL:0000784;5.60e-08;3!CL:0000775;5.85e-08;3!CL:0000623;7.32e-08;3!CL:0000767;2.09e-07;3!CL:0000226;2.27e-07;3!CL:0000842;2.27e-07;3!CL:0000453;5.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-78,136;CL:0000766,5.73e-63,72;CL:0000860,1.62e-62,42;CL:0002057,1.62e-62,42;CL:0000037,5.04e-61,168;CL:0000988,7.06e-57,177;CL:0000473,4.29e-56,48;CL:0000234,4.29e-56,48;CL:0002031,1.46e-53,120;CL:0002032,1.07e-52,161;CL:0000837,1.07e-52,161;CL:0002087,2.11e-52,115;CL:0000557,8.02e-51,67;CL:0002009,4.93e-49,61;CL:0000839,3.78e-46,66;CL:0002194,3.20e-45,59;CL:0000576,3.20e-45,59;CL:0000040,3.20e-45,59;CL:0000559,3.20e-45,59;CL:0000763,1.03e-44,108;CL:0000049,1.03e-44,108;CL:0000134,1.11e-25,354;CL:0002320,9.26e-25,361;CL:0000219,1.59e-21,386;CL:0002393,1.67e-18,9;CL:0002397,1.67e-18,9;CL:0000094,4.48e-18,8;CL:0000034,6.43e-18,441;CL:0000048,1.40e-17,427;CL:0000723,4.88e-17,433;CL:0000081,1.19e-12,11;CL:0000451,3.28e-09,10;CL:0000838,1.28e-08,52;CL:0000542,2.27e-08,53;CL:0000051,2.27e-08,53;CL:0000784,5.54e-08,3;CL:0000775,5.80e-08,3;CL:0000623,7.09e-08,3;CL:0000825,7.09e-08,3;CL:0000767,2.16e-07,3;CL:0000226,2.20e-07,3;CL:0000842,2.20e-07,3;CL:0000453,3.93e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-43;42!CL:0000049;7.41e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-22!102;UBERON:0003061!2.19e-22!102;UBERON:0002371!1.31e-21!80;UBERON:0001474!3.84e-20!86;UBERON:0002193!2.52e-19!112;UBERON:0004765!8.35e-18!101;UBERON:0001434!8.35e-18!101;UBERON:0002405!2.84e-14!115;UBERON:0002384!2.44e-11!375;UBERON:0002204!3.58e-09!167;UBERON:0003081!4.97e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.37e-45,76;UBERON:0001474,5.33e-43,82;UBERON:0002390,1.37e-39,98;UBERON:0003061,1.37e-39,98;UBERON:0004765,5.56e-38,90;UBERON:0002405,2.24e-36,93;UBERON:0002193,1.33e-34,108;UBERON:0001434,7.69e-33,100;UBERON:0002384,1.66e-23,371;UBERON:0002204,1.73e-14,167;UBERON:0003081,9.25e-13,203 | |||
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| |||
|short_description=p5@NFKB2 | |||
}} |
Revision as of 11:25, 10 September 2013
Short description: | p5@NFKB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NFKB2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 61bp_to_ENST00000369966_5end |
EntrezGene: | NFKB2 |
HGNC: | 7795 |
UniProt: | Q00653 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.37e-45 | 76 |
bone element | 5.33e-43 | 82 |
hematopoietic system | 1.37e-39 | 98 |
blood island | 1.37e-39 | 98 |
skeletal element | 5.56e-38 | 90 |
immune system | 2.24e-36 | 93 |
hemolymphoid system | 1.33e-34 | 108 |
skeletal system | 7.69e-33 | 100 |
connective tissue | 1.66e-23 | 371 |
musculoskeletal system | 1.73e-14 | 167 |
lateral plate mesoderm | 9.25e-13 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.