FFCP PHASE1:Hg19::chr20:42193811..42193831,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10110|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13900|TSSclassifier=S|UniProt=|association_with_transcript=-14bp_to_uc002xku.2_5end|coexpression_cluster_id=C4|description=CAGE_peak_4_at_SGK2_5end|id=chr20:42193811..42193831,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.49e-21;82!UBERON:0006241;4.12e-16;3!UBERON:0003057;4.12e-16;3!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206!UBERON:0005425;9.91e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.39e-110!57;UBERON:0005068!2.39e-110!57;UBERON:0006241!2.39e-110!57;UBERON:0007135!2.39e-110!57;UBERON:0002616!5.29e-90!59;UBERON:0001017!7.39e-90!82;UBERON:0005743!2.34e-85!86;UBERON:0000073!2.72e-84!94;UBERON:0001016!2.72e-84!94;UBERON:0000955!9.31e-84!69;UBERON:0006238!9.31e-84!69;UBERON:0002780!5.53e-80!41;UBERON:0001890!5.53e-80!41;UBERON:0006240!5.53e-80!41;UBERON:0003075!4.72e-78!86;UBERON:0007284!4.72e-78!86;UBERON:0003080!5.92e-78!42;UBERON:0001893!2.25e-77!34;UBERON:0002020!2.99e-77!34;UBERON:0003528!2.99e-77!34;UBERON:0002346!3.18e-74!90;UBERON:0002791!1.10e-73!33;UBERON:0001869!1.12e-69!32;UBERON:0007023!2.18e-66!115;UBERON:0003056!7.87e-52!61;UBERON:0002619!9.25e-52!22;UBERON:0000033!2.52e-46!123;UBERON:0000956!2.79e-45!25;UBERON:0000203!2.79e-45!25;UBERON:0001950!6.47e-45!20;UBERON:0000153!8.59e-44!129;UBERON:0007811!8.59e-44!129;UBERON:0004121!1.85e-43!169;UBERON:0000924!2.94e-42!173;UBERON:0006601!2.94e-42!173;UBERON:0002308!1.67e-35!9;UBERON:0000125!1.67e-35!9;UBERON:0003076!9.94e-32!15;UBERON:0003057!9.94e-32!15;UBERON:0009663!9.96e-28!7;UBERON:0002420!1.81e-27!9;UBERON:0007245!1.81e-27!9;UBERON:0010009!1.81e-27!9;UBERON:0010011!1.81e-27!9;UBERON:0000454!1.81e-27!9;UBERON:0000025!1.59e-26!194;UBERON:0002298!2.19e-25!8;UBERON:0004732!1.22e-24!13;UBERON:0000200!2.10e-23!6;UBERON:0004733!5.24e-21!12;UBERON:0002028!5.24e-21!12;UBERON:0007277!5.24e-21!12;UBERON:0004111!1.29e-19!241;UBERON:0000477!3.29e-16!286;UBERON:0000369!5.56e-16!4;UBERON:0002435!5.56e-16!4;UBERON:0000204!5.56e-16!4;UBERON:0010082!5.56e-16!4;UBERON:0000483!2.84e-15!309;UBERON:0000119!4.89e-15!312;UBERON:0000064!1.58e-14!219;UBERON:0002240!1.15e-13!3;UBERON:0001896!1.61e-13!3;UBERON:0005290!1.61e-13!3;UBERON:0010096!1.61e-13!3;UBERON:0000988!1.67e-13!3;UBERON:0006331!2.06e-13!3;UBERON:0002021!2.36e-13!5;UBERON:0001872!3.82e-13!5;UBERON:0000349!1.05e-12!5;UBERON:0000475!1.84e-12!365;UBERON:0002771!2.47e-12!3;UBERON:0005383!2.67e-12!3;UBERON:0005382!2.67e-12!3;UBERON:0001871!3.77e-12!7;UBERON:0002680!3.20e-11!9;UBERON:0001895!3.20e-11!9;UBERON:0010092!3.20e-11!9;UBERON:0005162!4.65e-10!2;UBERON:0000122!4.65e-10!2;UBERON:0001897!9.64e-10!2;UBERON:0001875!1.30e-09!2;UBERON:0006514!1.30e-09!2;UBERON:0002148!1.67e-09!2;UBERON:0009662!1.67e-09!2;UBERON:0001870!7.04e-09!2;UBERON:0001954!8.27e-09!2;UBERON:0003022!8.27e-09!2;UBERON:0002421!8.27e-09!2;UBERON:0002600!8.27e-09!2;UBERON:0001873!8.61e-09!2;UBERON:0010122!8.61e-09!2;UBERON:0002360!1.50e-08!2;UBERON:0000094!1.50e-08!2;UBERON:0007645!1.50e-08!2;UBERON:0005174!2.30e-08!5;UBERON:0001137!2.30e-08!5;UBERON:0000062!4.29e-08!511|ontology_enrichment_uberon_v019=UBERON:0001893;2.77e-58;34!UBERON:0003528;2.96e-56;34!UBERON:0002020;2.96e-56;34!UBERON:0002791;4.50e-52;32!UBERON:0001869;6.20e-52;32!UBERON:0002780;3.66e-50;41!UBERON:0001890;3.66e-50;41!UBERON:0000073;8.43e-50;53!UBERON:0002616;8.43e-50;53!UBERON:0002619;1.49e-43;22!UBERON:0000956;3.78e-38;25!UBERON:0000203;3.78e-38;25!UBERON:0001017;3.16e-36;75!UBERON:0001950;5.73e-36;20!UBERON:0000125;5.57e-34;9!UBERON:0002308;5.57e-34;9!UBERON:0000955;1.45e-33;68!UBERON:0002298;4.12e-30;6!UBERON:0001016;4.71e-28;83!UBERON:0009663;8.34e-25;7!UBERON:0004732;9.53e-24;13!UBERON:0004733;1.17e-19;12!UBERON:0002028;1.17e-19;12!UBERON:0002420;3.55e-19;9!UBERON:0007245;3.55e-19;9!UBERON:0010009;3.55e-19;9!UBERON:0010011;3.55e-19;9!UBERON:0000454;3.55e-19;9!UBERON:0007023;5.61e-19;114!UBERON:0002240;4.12e-16;3!UBERON:0005174;4.12e-16;3!UBERON:0001137;4.12e-16;3!UBERON:0001896;5.58e-16;3!UBERON:0005290;5.58e-16;3!UBERON:0000988;6.49e-16;3!UBERON:0002021;8.05e-16;5!UBERON:0001872;1.10e-15;5!UBERON:0000200;4.05e-13;6!UBERON:0011216;1.89e-12;132!UBERON:0005162;8.78e-12;2!UBERON:0000122;8.78e-12;2!UBERON:0001897;2.17e-11;2!UBERON:0010225;2.17e-11;2!UBERON:0001875;2.46e-11;2!UBERON:0006514;2.46e-11;2!UBERON:0000369;3.11e-11;4!UBERON:0002435;3.11e-11;4!UBERON:0000204;3.11e-11;4!UBERON:0002148;4.19e-11;2!UBERON:0006331;4.19e-11;2!UBERON:0009662;4.19e-11;2!UBERON:0002771;2.20e-10;2!UBERON:0001954;2.20e-10;2!UBERON:0003022;2.20e-10;2!UBERON:0002421;2.20e-10;2!UBERON:0002600;2.20e-10;2!UBERON:0000349;4.39e-09;5!UBERON:0002680;5.13e-09;9!UBERON:0001895;5.13e-09;9!UBERON:0010314;1.66e-08;132!UBERON:0001894;2.93e-07;7!UBERON:0005383;3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13900 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_uc002xku.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_SGK2_5end | |||
|id=chr20:42193811..42193831,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.49e-21;82!UBERON:0006241;4.12e-16;3!UBERON:0003057;4.12e-16;3!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206!UBERON:0005425;9.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SGK2 | |||
}} |
Revision as of 08:33, 12 September 2013
Short description: | p4@SGK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SGK2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -14bp_to_uc002xku.2_5end |
EntrezGene: | SGK2 |
HGNC: | 13900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.