FFCP PHASE1:Hg19::chr3:16216111..16216120,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=117248|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21531|TSSclassifier=S|UniProt=Q8N3T1|association_with_transcript=-35bp_to_ENST00000339732_5end|coexpression_cluster_id=C2251|description=CAGE_peak_4_at_GALNTL2_5end|id=chr3:16216111..16216120,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002564;1.01e-13;3!CL:0002602;1.28e-09;2|ontology_enrichment_celltype_v019_2=CL:0002564,8.40e-14,3;CL:0002602,1.29e-09,2|ontology_enrichment_development_v019=UBERON:0006241;7.22e-07;3!UBERON:0003057;7.22e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.48e-30!115;UBERON:0001049!5.52e-16!57;UBERON:0005068!5.52e-16!57;UBERON:0006241!5.52e-16!57;UBERON:0007135!5.52e-16!57;UBERON:0002616!1.25e-12!59;UBERON:0001017!3.11e-11!82;UBERON:0003075!5.04e-11!86;UBERON:0007284!5.04e-11!86;UBERON:0005743!7.37e-11!86;UBERON:0000955!1.33e-10!69;UBERON:0006238!1.33e-10!69;UBERON:0000475!3.18e-10!365;UBERON:0000073!4.65e-10!94;UBERON:0001016!4.65e-10!94;UBERON:0002298!5.03e-10!8;UBERON:0002346!5.21e-10!90;UBERON:0003080!7.80e-10!42;UBERON:0002780!4.44e-09!41;UBERON:0001890!4.44e-09!41;UBERON:0006240!4.44e-09!41;UBERON:0000153!2.53e-08!129;UBERON:0007811!2.53e-08!129;UBERON:0000033!3.76e-08!123;UBERON:0003076!5.53e-08!15;UBERON:0003057!5.53e-08!15;UBERON:0000477!1.89e-07!286;UBERON:0005174!3.78e-07!5;UBERON:0001137!3.78e-07!5|ontology_enrichment_uberon_v019=UBERON:0011135;1.33e-21;5!UBERON:0002216;1.33e-21;5!UBERON:0011134;1.33e-21;5!UBERON:0002209;1.33e-21;5!UBERON:0002213;1.33e-21;5!UBERON:0007844;1.33e-21;5!UBERON:0011138;1.33e-21;5!UBERON:0001130;1.33e-21;5!UBERON:0001066;1.33e-21;5!UBERON:0001468;1.33e-21;5!UBERON:0004905;4.17e-19;8!UBERON:0000982;4.17e-19;8!UBERON:0004770;4.17e-19;8!UBERON:0002242;1.01e-13;3!UBERON:0001896;8.13e-13;3!UBERON:0005290;8.13e-13;3!UBERON:0002298;4.79e-11;6!UBERON:0002784;5.04e-10;4!UBERON:0006444;1.28e-09;2!UBERON:0001995;1.28e-09;2!UBERON:0004715;1.28e-09;2!UBERON:0001897;1.65e-09;2!UBERON:0010225;1.65e-09;2!UBERON:0005162;4.14e-09;2!UBERON:0000122;4.14e-09;2!UBERON:0000075;4.50e-09;16!UBERON:0004732;1.31e-07;13!UBERON:0002240;7.22e-07;3!UBERON:0005174;7.22e-07;3!UBERON:0001137;7.22e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.12e-21,5;UBERON:0002216,1.12e-21,5;UBERON:0011134,1.12e-21,5;UBERON:0002209,1.12e-21,5;UBERON:0002213,1.12e-21,5;UBERON:0005856,1.12e-21,5;UBERON:0005866,1.12e-21,5;UBERON:0005863,1.12e-21,5;UBERON:0007844,1.12e-21,5;UBERON:0011138,1.12e-21,5;UBERON:0001130,1.12e-21,5;UBERON:0001066,1.12e-21,5;UBERON:0001468,1.12e-21,5;UBERON:0004905,3.99e-19,8;UBERON:0000982,3.99e-19,8;UBERON:0004770,3.99e-19,8;UBERON:0007023,1.40e-16,114;UBERON:0002242,8.40e-14,3;UBERON:0003068,8.40e-14,3;UBERON:0002328,8.40e-14,3;UBERON:0004880,8.40e-14,3;UBERON:0001896,2.51e-12,3;UBERON:0005290,2.51e-12,3;UBERON:0010096,2.51e-12,3;UBERON:0002298,8.00e-11,6;UBERON:0002784,8.18e-10,4;UBERON:0006444,1.29e-09,2;UBERON:0001995,1.29e-09,2;UBERON:0004715,1.29e-09,2;UBERON:0001897,1.59e-09,2;UBERON:0010225,1.59e-09,2;UBERON:0003076,2.36e-09,15;UBERON:0003057,2.36e-09,15;UBERON:0005162,3.39e-09,2;UBERON:0000122,3.39e-09,2;UBERON:0000075,5.17e-09,16;UBERON:0001049,5.92e-08,56;UBERON:0005068,5.92e-08,56;UBERON:0006241,5.92e-08,56;UBERON:0007135,5.92e-08,56;UBERON:0004732,1.65e-07,13;UBERON:0002240,7.46e-07,3;UBERON:0005174,7.46e-07,3;UBERON:0001137,7.46e-07,3|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,1.26343974685366,0,0,0,0,0,3.34169152992126,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,1.50401373190767,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,1.52054421143703,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,1.19558944441441,0.117434498643765,0.647491777472526,0,1.42907919878425,0,1.65321249881225,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0,0.751190294532984,0,0,0,0.423863802319124,0,0.206105058476878,0,0.18611685633159,0.506328996723799,0.292311015483596,1.26216887122057,0.184099797284599,0.161646056818812,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=117248 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21531 | |||
|TSSclassifier=S | |||
|UniProt=Q8N3T1 | |||
|association_with_transcript=-35bp_to_ENST00000339732_5end | |||
|coexpression_cluster_id=C2251 | |||
|description=CAGE_peak_4_at_GALNTL2_5end | |||
|id=chr3:16216111..16216120,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.01e-13;3!CL:0002602;1.28e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,8.40e-14,3;CL:0002602,1.29e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.22e-07;3!UBERON:0003057;7.22e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-30!115;UBERON:0001049!5.52e-16!57;UBERON:0005068!5.52e-16!57;UBERON:0006241!5.52e-16!57;UBERON:0007135!5.52e-16!57;UBERON:0002616!1.25e-12!59;UBERON:0001017!3.11e-11!82;UBERON:0003075!5.04e-11!86;UBERON:0007284!5.04e-11!86;UBERON:0005743!7.37e-11!86;UBERON:0000955!1.33e-10!69;UBERON:0006238!1.33e-10!69;UBERON:0000475!3.18e-10!365;UBERON:0000073!4.65e-10!94;UBERON:0001016!4.65e-10!94;UBERON:0002298!5.03e-10!8;UBERON:0002346!5.21e-10!90;UBERON:0003080!7.80e-10!42;UBERON:0002780!4.44e-09!41;UBERON:0001890!4.44e-09!41;UBERON:0006240!4.44e-09!41;UBERON:0000153!2.53e-08!129;UBERON:0007811!2.53e-08!129;UBERON:0000033!3.76e-08!123;UBERON:0003076!5.53e-08!15;UBERON:0003057!5.53e-08!15;UBERON:0000477!1.89e-07!286;UBERON:0005174!3.78e-07!5;UBERON:0001137!3.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.33e-21;5!UBERON:0002216;1.33e-21;5!UBERON:0011134;1.33e-21;5!UBERON:0002209;1.33e-21;5!UBERON:0002213;1.33e-21;5!UBERON:0007844;1.33e-21;5!UBERON:0011138;1.33e-21;5!UBERON:0001130;1.33e-21;5!UBERON:0001066;1.33e-21;5!UBERON:0001468;1.33e-21;5!UBERON:0004905;4.17e-19;8!UBERON:0000982;4.17e-19;8!UBERON:0004770;4.17e-19;8!UBERON:0002242;1.01e-13;3!UBERON:0001896;8.13e-13;3!UBERON:0005290;8.13e-13;3!UBERON:0002298;4.79e-11;6!UBERON:0002784;5.04e-10;4!UBERON:0006444;1.28e-09;2!UBERON:0001995;1.28e-09;2!UBERON:0004715;1.28e-09;2!UBERON:0001897;1.65e-09;2!UBERON:0010225;1.65e-09;2!UBERON:0005162;4.14e-09;2!UBERON:0000122;4.14e-09;2!UBERON:0000075;4.50e-09;16!UBERON:0004732;1.31e-07;13!UBERON:0002240;7.22e-07;3!UBERON:0005174;7.22e-07;3!UBERON:0001137;7.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.12e-21,5;UBERON:0002216,1.12e-21,5;UBERON:0011134,1.12e-21,5;UBERON:0002209,1.12e-21,5;UBERON:0002213,1.12e-21,5;UBERON:0005856,1.12e-21,5;UBERON:0005866,1.12e-21,5;UBERON:0005863,1.12e-21,5;UBERON:0007844,1.12e-21,5;UBERON:0011138,1.12e-21,5;UBERON:0001130,1.12e-21,5;UBERON:0001066,1.12e-21,5;UBERON:0001468,1.12e-21,5;UBERON:0004905,3.99e-19,8;UBERON:0000982,3.99e-19,8;UBERON:0004770,3.99e-19,8;UBERON:0007023,1.40e-16,114;UBERON:0002242,8.40e-14,3;UBERON:0003068,8.40e-14,3;UBERON:0002328,8.40e-14,3;UBERON:0004880,8.40e-14,3;UBERON:0001896,2.51e-12,3;UBERON:0005290,2.51e-12,3;UBERON:0010096,2.51e-12,3;UBERON:0002298,8.00e-11,6;UBERON:0002784,8.18e-10,4;UBERON:0006444,1.29e-09,2;UBERON:0001995,1.29e-09,2;UBERON:0004715,1.29e-09,2;UBERON:0001897,1.59e-09,2;UBERON:0010225,1.59e-09,2;UBERON:0003076,2.36e-09,15;UBERON:0003057,2.36e-09,15;UBERON:0005162,3.39e-09,2;UBERON:0000122,3.39e-09,2;UBERON:0000075,5.17e-09,16;UBERON:0001049,5.92e-08,56;UBERON:0005068,5.92e-08,56;UBERON:0006241,5.92e-08,56;UBERON:0007135,5.92e-08,56;UBERON:0004732,1.65e-07,13;UBERON:0002240,7.46e-07,3;UBERON:0005174,7.46e-07,3;UBERON:0001137,7.46e-07,3 | |||
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|short_description=p4@GALNTL2 | |||
}} |
Revision as of 22:31, 12 September 2013
Short description: | p4@GALNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GALNTL2_5end |
Coexpression cluster: | C2251_adipose_spinal_substantia_medulla_corpus_Anulus_tenocyte |
Association with transcript: | -35bp_to_ENST00000339732_5end |
EntrezGene: | GALNTL2 |
HGNC: | 21531 |
UniProt: | Q8N3T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 8.40e-14 | 3 |
annulus pulposus cell | 1.29e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.