FFCP PHASE1:Hg19::chr7:150813498..150813509,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=104bp_to_ENST00000473140_5end | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_30_at_AGAP3_5end | |||
|id=chr7:150813498..150813509,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.73e-33!43;CL:0002368!9.54e-28!13;CL:0000223!7.68e-25!59;CL:0002159!3.03e-21!13;CL:0000066!1.73e-19!254;CL:0000244!1.62e-16!4;CL:0000731!1.62e-16!4;CL:0002202!6.57e-15!9;CL:0002632!6.57e-15!9;CL:0000068!2.37e-12!3;CL:0000069!2.37e-12!3;CL:0000307!2.37e-12!3;CL:0000377!2.37e-12!3;CL:0002328!4.16e-12!3;CL:0002621!4.83e-12!3;CL:0002166!1.57e-11!3;CL:0002251!8.19e-10!21;CL:0002327!1.35e-09!4;CL:0002077!4.06e-09!33;CL:0000317!2.42e-08!2;CL:1000448!2.42e-08!2;CL:0002308!2.42e-08!2;CL:0002140!2.42e-08!2;CL:0000575!2.81e-08!2;CL:0000220!3.72e-08!246;CL:0002321!4.95e-08!248;CL:0000362!1.46e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.58e-50;4!CL:0000731;2.58e-50;4!CL:0002327;2.18e-28;4!CL:0002368;6.52e-24;13!CL:0000307;1.78e-17;3!CL:0002252;9.72e-14;1!CL:0002202;5.41e-13;9!CL:0002632;5.41e-13;9!CL:0002076;7.99e-13;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.07e-50,4;CL:0000731,1.07e-50,4;CL:0002327,1.13e-28,4;CL:0002368,9.58e-24,13;CL:0000068,2.50e-17,3;CL:0000069,2.50e-17,3;CL:0000307,2.50e-17,3;CL:0000377,2.50e-17,3;CL:0002076,7.75e-14,42;CL:0002252,9.73e-14,1;CL:0002202,6.65e-13,9;CL:0002632,6.65e-13,9;CL:0000223,7.30e-10,58;CL:0000066,2.52e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.78e-17;3!UBERON:0008814;1.64e-07;2!UBERON:0010056;1.64e-07;2!CL:0000223;3.68e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.26e-19!5;UBERON:0005910!4.32e-16!6;UBERON:0001004!6.82e-14!72;UBERON:0004119!3.14e-13!169;UBERON:0000925!3.14e-13!169;UBERON:0006595!3.14e-13!169;UBERON:0007196!2.60e-12!14;UBERON:0001558!2.60e-12!14;UBERON:0004815!4.16e-12!3;UBERON:0002031!4.16e-12!3;UBERON:0001949!4.83e-12!3;UBERON:0000065!1.39e-10!53;UBERON:0001911!1.35e-09!4;UBERON:0005333!1.35e-09!4;UBERON:0008425!1.35e-09!4;UBERON:0005311!1.35e-09!4;UBERON:0002185!3.50e-09!4;UBERON:0005178!6.33e-09!34;UBERON:0002224!6.33e-09!34;UBERON:0003126!9.15e-09!7;UBERON:0001005!9.15e-09!7;UBERON:0001708!9.32e-09!4;UBERON:0001704!9.32e-09!4;UBERON:0005181!1.29e-08!35;UBERON:0000161!2.23e-08!35;UBERON:0002419!2.42e-08!2;UBERON:0007771!2.42e-08!2;UBERON:0003297!2.42e-08!2;UBERON:0001821!2.42e-08!2;UBERON:0003487!2.42e-08!2;UBERON:0001820!2.42e-08!2;UBERON:0005089!2.42e-08!2;UBERON:0005088!2.42e-08!2;UBERON:0000166!1.30e-07!21;UBERON:0000165!4.77e-07!28;UBERON:0000930!4.77e-07!28;UBERON:0003102!5.41e-07!95;UBERON:0000344!5.68e-07!12;UBERON:0003729!7.74e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.35e-40;5!UBERON:0005910;1.04e-33;6!UBERON:0001911;2.18e-28;4!UBERON:0000486;4.94e-26;12!UBERON:0005911;2.05e-09;36!UBERON:0003126;5.09e-08;7!UBERON:0001005;5.09e-08;7!UBERON:0007196;5.12e-08;15!UBERON:0001558;5.12e-08;15!UBERON:0006554;5.93e-07;30!UBERON:0001008;5.93e-07;30!UBERON:0000065;8.44e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.16e-40,5;UBERON:0005910,5.80e-34,6;UBERON:0001911,1.13e-28,4;UBERON:0005333,1.13e-28,4;UBERON:0008425,1.13e-28,4;UBERON:0005311,1.13e-28,4;UBERON:0000076,1.11e-14,8;UBERON:0004119,1.33e-09,160;UBERON:0000925,1.33e-09,160;UBERON:0006595,1.33e-09,160;UBERON:0007196,5.78e-08,15;UBERON:0001558,5.78e-08,15;UBERON:0003126,5.87e-08,7;UBERON:0001005,5.87e-08,7;UBERON:0000065,6.71e-08,54;UBERON:0001004,1.43e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64625428112938,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.141775097242386,1.43293636324557,1.16253575405585,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,0.960950336825531,3.06270509987002,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,1.34060455107157,1.08890984861323,0,2.58303223602738,1.68471475667626,2.21715076768338,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,1.08858373948481,0,0.202056159043763,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@AGAP3 | |||
}} |
Revision as of 20:08, 22 January 2014
Short description: | p30@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_AGAP3_5end |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | 104bp_to_ENST00000473140_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.07e-50 | 4 |
urothelial cell | 1.07e-50 | 4 |
mammary gland epithelial cell | 1.13e-28 | 4 |
respiratory epithelial cell | 9.58e-24 | 13 |
duct epithelial cell | 2.50e-17 | 3 |
branched duct epithelial cell | 2.50e-17 | 3 |
tracheal epithelial cell | 2.50e-17 | 3 |
tracheoblast | 2.50e-17 | 3 |
endo-epithelial cell | 7.75e-14 | 42 |
epithelial cell of esophagus | 9.73e-14 | 1 |
epithelial cell of tracheobronchial tree | 6.65e-13 | 9 |
epithelial cell of lower respiratory tract | 6.65e-13 | 9 |
endodermal cell | 7.30e-10 | 58 |
epithelial cell | 2.52e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.16e-40 | 5 |
transitional epithelium | 5.80e-34 | 6 |
mammary gland | 1.13e-28 | 4 |
mammary bud | 1.13e-28 | 4 |
mammary ridge | 1.13e-28 | 4 |
mammary placode | 1.13e-28 | 4 |
external ectoderm | 1.11e-14 | 8 |
endoderm-derived structure | 1.33e-09 | 160 |
endoderm | 1.33e-09 | 160 |
presumptive endoderm | 1.33e-09 | 160 |
tracheobronchial tree | 5.78e-08 | 15 |
lower respiratory tract | 5.78e-08 | 15 |
trachea | 5.87e-08 | 7 |
respiratory airway | 5.87e-08 | 7 |
respiratory tract | 6.71e-08 | 54 |
respiratory system | 1.43e-07 | 74 |