FFCP PHASE1:Hg19::chr11:86380564..86380569,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:86380564..86380569,-|id=chr11:86380564..86380569,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002586;2.05e-13;3!CL:0000064;8.87e-13;3!CL:0000067;8.87e-13;3!CL:0005012;8.87e-13;3!CL:0002304;8.87e-13;3!CL:0000149;2.75e-10;4!CL:0002379;3.29e-10;1|ontology_enrichment_celltype_v019_2=CL:0002586,2.05e-13,3;CL:0000064,6.97e-13,3;CL:0000067,6.97e-13,3;CL:0005012,6.97e-13,3;CL:0002304,6.97e-13,3;CL:0000149,2.75e-10,4;CL:0002379,3.01e-10,1|ontology_enrichment_development_v019=UBERON:0003056;3.79e-13;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;3.29e-10;1!DOID:3565;3.29e-10;1|ontology_enrichment_disease_v019_2=DOID:3620,3.01e-10,1;DOID:3565,3.01e-10,1|ontology_enrichment_uberon=UBERON:0003056!1.44e-22!61;UBERON:0003075!7.63e-22!86;UBERON:0007284!7.63e-22!86;UBERON:0002346!2.71e-20!90;UBERON:0000073!6.40e-20!94;UBERON:0001016!6.40e-20!94;UBERON:0005743!1.10e-19!86;UBERON:0000033!3.83e-18!123;UBERON:0000955!4.63e-18!69;UBERON:0006238!4.63e-18!69;UBERON:0000153!1.25e-16!129;UBERON:0007811!1.25e-16!129;UBERON:0002616!2.65e-16!59;UBERON:0001017!7.62e-16!82;UBERON:0001049!7.93e-16!57;UBERON:0005068!7.93e-16!57;UBERON:0006241!7.93e-16!57;UBERON:0007135!7.93e-16!57;UBERON:0007023!2.03e-15!115;UBERON:0002780!2.66e-15!41;UBERON:0001890!2.66e-15!41;UBERON:0006240!2.66e-15!41;UBERON:0003080!8.93e-15!42;UBERON:0004121!1.41e-13!169;UBERON:0000924!6.45e-13!173;UBERON:0006601!6.45e-13!173;UBERON:0001893!6.66e-13!34;UBERON:0001869!1.02e-12!32;UBERON:0002791!5.22e-12!33;UBERON:0002020!1.13e-11!34;UBERON:0003528!1.13e-11!34;UBERON:0000970!6.60e-10!20;UBERON:0000119!1.02e-09!312;UBERON:0000020!1.14e-09!23;UBERON:0000966!1.29e-09!5;UBERON:0005388!1.29e-09!5;UBERON:0001802!1.29e-09!5;UBERON:0000483!1.48e-09!309;UBERON:0000481!2.72e-09!347;UBERON:0002104!2.81e-09!21;UBERON:0007625!3.38e-09!11;UBERON:0001032!4.07e-09!24;UBERON:0004456!4.07e-09!24;UBERON:0000019!5.32e-09!19;UBERON:0000047!5.32e-09!19;UBERON:0004088!5.32e-09!19;UBERON:0003072!5.32e-09!19;UBERON:0003071!5.32e-09!19;UBERON:0004128!5.32e-09!19;UBERON:0000475!5.89e-09!365;UBERON:0000064!1.30e-08!219;UBERON:0001456!7.27e-08!21;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0000488!3.81e-07!4|ontology_enrichment_uberon_v019=UBERON:0000966;1.07e-29;5!UBERON:0005388;1.07e-29;5!UBERON:0001802;1.07e-29;5!UBERON:0000019;8.31e-17;19!UBERON:0000047;8.31e-17;19!UBERON:0004088;8.31e-17;19!UBERON:0010230;8.31e-17;19!UBERON:0000970;6.01e-16;20!UBERON:0002104;3.61e-15;21!UBERON:0001456;3.61e-15;21!UBERON:0000020;8.16e-14;23!UBERON:0007625;1.87e-13;11!UBERON:0001781;2.05e-13;3!UBERON:0001782;2.05e-13;3!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0001778;8.87e-13;3!UBERON:0001775;8.87e-13;3!UBERON:0001052;2.34e-10;4!UBERON:0000488;8.19e-10;4!UBERON:0004907;1.86e-08;5!UBERON:0002203;7.98e-07;6!UBERON:0001768;7.98e-07;6!UBERON:0002200;7.98e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000966,8.84e-25,6;UBERON:0005388,8.84e-25,6;UBERON:0001802,8.84e-25,6;UBERON:0000019,5.56e-16,20;UBERON:0000047,5.56e-16,20;UBERON:0010312,5.56e-16,20;UBERON:0004088,5.56e-16,20;UBERON:0010230,5.56e-16,20;UBERON:0003072,5.56e-16,20;UBERON:0004128,5.56e-16,20;UBERON:0003071,5.56e-16,20;UBERON:0000970,3.35e-15,21;UBERON:0002104,3.35e-15,21;UBERON:0001456,1.71e-14,22;UBERON:0007625,1.65e-13,11;UBERON:0001782,2.05e-13,3;UBERON:0005424,2.05e-13,3;UBERON:0000020,2.99e-13,24;UBERON:0001032,2.99e-13,24;UBERON:0004456,2.99e-13,24;UBERON:0001778,6.97e-13,3;UBERON:0001775,6.97e-13,3;UBERON:0001052,2.39e-10,4;UBERON:0001781,2.75e-10,4;UBERON:0005085,3.68e-10,31;UBERON:0000488,6.84e-10,4;UBERON:0004907,1.89e-08,5;UBERON:0002203,7.09e-07,6;UBERON:0001768,7.09e-07,6;UBERON:0002200,7.09e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,1.55210578223795,0.614843499851882,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:86380564..86380569,- | |||
|id=chr11:86380564..86380569,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.05e-13;3!CL:0000064;8.87e-13;3!CL:0000067;8.87e-13;3!CL:0005012;8.87e-13;3!CL:0002304;8.87e-13;3!CL:0000149;2.75e-10;4!CL:0002379;3.29e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.05e-13,3;CL:0000064,6.97e-13,3;CL:0000067,6.97e-13,3;CL:0005012,6.97e-13,3;CL:0002304,6.97e-13,3;CL:0000149,2.75e-10,4;CL:0002379,3.01e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.79e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.29e-10;1!DOID:3565;3.29e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.01e-10,1;DOID:3565,3.01e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003056!1.44e-22!61;UBERON:0003075!7.63e-22!86;UBERON:0007284!7.63e-22!86;UBERON:0002346!2.71e-20!90;UBERON:0000073!6.40e-20!94;UBERON:0001016!6.40e-20!94;UBERON:0005743!1.10e-19!86;UBERON:0000033!3.83e-18!123;UBERON:0000955!4.63e-18!69;UBERON:0006238!4.63e-18!69;UBERON:0000153!1.25e-16!129;UBERON:0007811!1.25e-16!129;UBERON:0002616!2.65e-16!59;UBERON:0001017!7.62e-16!82;UBERON:0001049!7.93e-16!57;UBERON:0005068!7.93e-16!57;UBERON:0006241!7.93e-16!57;UBERON:0007135!7.93e-16!57;UBERON:0007023!2.03e-15!115;UBERON:0002780!2.66e-15!41;UBERON:0001890!2.66e-15!41;UBERON:0006240!2.66e-15!41;UBERON:0003080!8.93e-15!42;UBERON:0004121!1.41e-13!169;UBERON:0000924!6.45e-13!173;UBERON:0006601!6.45e-13!173;UBERON:0001893!6.66e-13!34;UBERON:0001869!1.02e-12!32;UBERON:0002791!5.22e-12!33;UBERON:0002020!1.13e-11!34;UBERON:0003528!1.13e-11!34;UBERON:0000970!6.60e-10!20;UBERON:0000119!1.02e-09!312;UBERON:0000020!1.14e-09!23;UBERON:0000966!1.29e-09!5;UBERON:0005388!1.29e-09!5;UBERON:0001802!1.29e-09!5;UBERON:0000483!1.48e-09!309;UBERON:0000481!2.72e-09!347;UBERON:0002104!2.81e-09!21;UBERON:0007625!3.38e-09!11;UBERON:0001032!4.07e-09!24;UBERON:0004456!4.07e-09!24;UBERON:0000019!5.32e-09!19;UBERON:0000047!5.32e-09!19;UBERON:0004088!5.32e-09!19;UBERON:0003072!5.32e-09!19;UBERON:0003071!5.32e-09!19;UBERON:0004128!5.32e-09!19;UBERON:0000475!5.89e-09!365;UBERON:0000064!1.30e-08!219;UBERON:0001456!7.27e-08!21;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0000488!3.81e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.07e-29;5!UBERON:0005388;1.07e-29;5!UBERON:0001802;1.07e-29;5!UBERON:0000019;8.31e-17;19!UBERON:0000047;8.31e-17;19!UBERON:0004088;8.31e-17;19!UBERON:0010230;8.31e-17;19!UBERON:0000970;6.01e-16;20!UBERON:0002104;3.61e-15;21!UBERON:0001456;3.61e-15;21!UBERON:0000020;8.16e-14;23!UBERON:0007625;1.87e-13;11!UBERON:0001781;2.05e-13;3!UBERON:0001782;2.05e-13;3!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0001778;8.87e-13;3!UBERON:0001775;8.87e-13;3!UBERON:0001052;2.34e-10;4!UBERON:0000488;8.19e-10;4!UBERON:0004907;1.86e-08;5!UBERON:0002203;7.98e-07;6!UBERON:0001768;7.98e-07;6!UBERON:0002200;7.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,8.84e-25,6;UBERON:0005388,8.84e-25,6;UBERON:0001802,8.84e-25,6;UBERON:0000019,5.56e-16,20;UBERON:0000047,5.56e-16,20;UBERON:0010312,5.56e-16,20;UBERON:0004088,5.56e-16,20;UBERON:0010230,5.56e-16,20;UBERON:0003072,5.56e-16,20;UBERON:0004128,5.56e-16,20;UBERON:0003071,5.56e-16,20;UBERON:0000970,3.35e-15,21;UBERON:0002104,3.35e-15,21;UBERON:0001456,1.71e-14,22;UBERON:0007625,1.65e-13,11;UBERON:0001782,2.05e-13,3;UBERON:0005424,2.05e-13,3;UBERON:0000020,2.99e-13,24;UBERON:0001032,2.99e-13,24;UBERON:0004456,2.99e-13,24;UBERON:0001778,6.97e-13,3;UBERON:0001775,6.97e-13,3;UBERON:0001052,2.39e-10,4;UBERON:0001781,2.75e-10,4;UBERON:0005085,3.68e-10,31;UBERON:0000488,6.84e-10,4;UBERON:0004907,1.89e-08,5;UBERON:0002203,7.09e-07,6;UBERON:0001768,7.09e-07,6;UBERON:0002200,7.09e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,1.55210578223795,0.614843499851882,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,13.848306756285,3.28014645699706,0.650756789328606,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,19.2797054800038,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,1.96935688737711,0,0.0898683511473268,0.179021174675609,0,1.38100767891707,0,0,0,0.463840490809256,0,0,0,0,0,0.762760950878299,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27495161320068,0,0,19.042200297304,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.240476460754601,0,0,0.144090417154106,0,0,0,0.99402028452346,0,0,0.104602846312333,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.157611414598396,0.0524545881349981,0.316801009558219,0,0,0,0,16.0189178722492,0,0,0,0,0.164185041498678,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,1.08803560673895,0.2506898940227,2.14441903734423,0,0,0,0.488105059607853,0,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,1.6468607378872,0,0.724605143054126,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0.578742114812744,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.380494861163441,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0,0.460935950223117,0,0.611727596791485,0.328863867814245,0.472775363535873,0,0.706437835654626,0.785577949580009,4.76462677633441,0,0.215927591218621,0,2.21577286947635,2.21219056425817,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,2.25745537315059,0,0,0.513314034281235,0,0.485710993059139,0,0,0,0.45178432815584,1.97892930141772,0,0,0,0,5.39326307858592,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0.633492505057185,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,2.4669009767735,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0.733448665097199,0,0,0,0 | |||
|short_description=p@chr11:86380564..86380569,- | |||
}} |
Revision as of 20:03, 10 September 2013
Short description: | p@chr11:86380564..86380569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86380564..86380569, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.05e-13 | 3 |
ciliated cell | 6.97e-13 | 3 |
ciliated epithelial cell | 6.97e-13 | 3 |
multi-ciliated epithelial cell | 6.97e-13 | 3 |
non-pigmented ciliary epithelial cell | 6.97e-13 | 3 |
visual pigment cell | 2.75e-10 | 4 |
meningothelial cell | 3.01e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
retina | 8.84e-25 | 6 |
photoreceptor array | 8.84e-25 | 6 |
posterior segment of eyeball | 8.84e-25 | 6 |
camera-type eye | 5.56e-16 | 20 |
simple eye | 5.56e-16 | 20 |
immature eye | 5.56e-16 | 20 |
ocular region | 5.56e-16 | 20 |
eyeball of camera-type eye | 5.56e-16 | 20 |
optic cup | 5.56e-16 | 20 |
optic vesicle | 5.56e-16 | 20 |
eye primordium | 5.56e-16 | 20 |
eye | 3.35e-15 | 21 |
visual system | 3.35e-15 | 21 |
face | 1.71e-14 | 22 |
pigment epithelium of eye | 1.65e-13 | 11 |
pigmented layer of retina | 2.05e-13 | 3 |
presumptive retinal pigmented epithelium | 2.05e-13 | 3 |
sense organ | 2.99e-13 | 24 |
sensory system | 2.99e-13 | 24 |
entire sense organ system | 2.99e-13 | 24 |
ciliary epithelium | 6.97e-13 | 3 |
ciliary body | 6.97e-13 | 3 |
rectum | 2.39e-10 | 4 |
layer of retina | 2.75e-10 | 4 |
ectodermal placode | 3.68e-10 | 31 |
atypical epithelium | 6.84e-10 | 4 |
lower digestive tract | 1.89e-08 | 5 |
vasculature of eye | 7.09e-07 | 6 |
uvea | 7.09e-07 | 6 |
vasculature of head | 7.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.01e-10 | 1 |
meningioma | 3.01e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.