FFCP PHASE1:Hg19::chr14:60975858..60975869,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4990|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10892|TSSclassifier=S|UniProt=O95475,Q6P051|association_with_transcript=-68bp_to_NM_007374,uc001xfa.3_5end|coexpression_cluster_id=C1726|description=CAGE_peak_2_at_SIX6_5end|id=chr14:60975858..60975869,+|ontology_enrichment_celltype=CL:0002322!6.87e-23!5;CL:0000064!1.32e-15!3;CL:0005012!1.32e-15!3;CL:0000067!1.32e-15!3;CL:0002304!1.32e-15!3;CL:0000075!5.11e-13!27;CL:0000306!1.42e-11!4;CL:0002222!1.42e-11!4;CL:0002224!1.42e-11!4;CL:0000710!3.36e-08!20;CL:0000133!3.18e-07!59|ontology_enrichment_celltype_v019=CL:0000064;2.65e-36;3!CL:0000067;2.65e-36;3!CL:0005012;2.65e-36;3!CL:0002304;2.65e-36;3!CL:0000075;6.04e-27;27!CL:0000306;8.39e-27;4!CL:0002222;8.39e-27;4!CL:0002224;8.39e-27;4!CL:0000710;1.02e-14;20!CL:0000342;9.73e-13;1!CL:0002565;9.73e-13;1!CL:0002321;1.28e-12;15!CL:0002322;2.84e-10;5!CL:0000333;3.50e-10;5!CL:0002077;3.03e-08;34!CL:0000147;5.18e-08;14|ontology_enrichment_celltype_v019_2=CL:0000064,2.65e-36,3;CL:0000067,2.65e-36,3;CL:0005012,2.65e-36,3;CL:0002304,2.65e-36,3;CL:0000075,6.04e-27,27;CL:0000306,8.39e-27,4;CL:0002222,8.39e-27,4;CL:0002224,8.39e-27,4;CL:0000710,1.02e-14,20;CL:0000342,8.64e-13,1;CL:0002565,8.64e-13,1;CL:0002322,2.84e-10,5;CL:0000133,8.41e-09,59;CL:0002077,1.26e-08,34;CL:0000147,5.06e-08,14;CL:0000221,3.85e-07,72|ontology_enrichment_development_v019=UBERON:0003056;2.48e-16;3!UBERON:0005425;9.73e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;1.24e-08;6|ontology_enrichment_disease_v019_2=DOID:169,1.31e-08,6|ontology_enrichment_uberon=UBERON:0002104!2.41e-21!21;UBERON:0007625!5.66e-21!11;UBERON:0000488!5.20e-20!4;UBERON:0001032!2.00e-18!24;UBERON:0004456!2.00e-18!24;UBERON:0000970!2.94e-18!20;UBERON:0001801!2.89e-16!14;UBERON:0000020!1.17e-15!23;UBERON:0001778!1.32e-15!3;UBERON:0001775!1.32e-15!3;UBERON:0000019!3.06e-15!19;UBERON:0000047!3.06e-15!19;UBERON:0004088!3.06e-15!19;UBERON:0003072!3.06e-15!19;UBERON:0003071!3.06e-15!19;UBERON:0004128!3.06e-15!19;UBERON:0001456!1.16e-13!21;UBERON:0002203!2.26e-13!6;UBERON:0001768!2.26e-13!6;UBERON:0010077!1.42e-11!4;UBERON:0005389!1.42e-11!4;UBERON:0000484!1.42e-11!4;UBERON:0002546!1.42e-11!4;UBERON:0000965!1.42e-11!4;UBERON:0001803!1.42e-11!4;UBERON:0003073!1.42e-11!4;UBERON:0005426!1.42e-11!4;UBERON:0000007!5.03e-11!2;UBERON:0002200!8.14e-11!11;UBERON:0006876!8.14e-11!11;UBERON:0002360!1.38e-09!2;UBERON:0000094!1.38e-09!2;UBERON:0007645!1.38e-09!2;UBERON:0005085!1.60e-09!29;UBERON:0003056!1.11e-08!61;UBERON:0003075!1.29e-07!86;UBERON:0007284!1.29e-07!86;UBERON:0004121!3.42e-07!169;UBERON:0002346!3.73e-07!90;UBERON:0000924!6.29e-07!173;UBERON:0006601!6.29e-07!173|ontology_enrichment_uberon_v019=UBERON:0002104;3.90e-54;21!UBERON:0007625;2.20e-51;11!UBERON:0001032;3.05e-47;24!UBERON:0004456;3.05e-47;24!UBERON:0000488;3.24e-47;4!UBERON:0000970;3.09e-46;20!UBERON:0001801;2.71e-40;14!UBERON:0000020;4.29e-40;23!UBERON:0000019;1.75e-38;19!UBERON:0000047;1.75e-38;19!UBERON:0004088;1.75e-38;19!UBERON:0010230;1.75e-38;19!UBERON:0001778;2.65e-36;3!UBERON:0001775;2.65e-36;3!UBERON:0001456;9.36e-35;21!UBERON:0002203;1.23e-31;6!UBERON:0001768;1.23e-31;6!UBERON:0002200;1.23e-31;6!UBERON:0010077;8.39e-27;4!UBERON:0005389;8.39e-27;4!UBERON:0000484;8.39e-27;4!UBERON:0000965;8.39e-27;4!UBERON:0001803;8.39e-27;4!UBERON:0000007;6.68e-25;2!UBERON:0010371;1.36e-17;31!UBERON:0006876;2.01e-17;11!UBERON:0003296;5.89e-13;4!UBERON:0010133;5.89e-13;4!UBERON:0000941;9.73e-13;1!UBERON:0001785;9.73e-13;1!UBERON:0002464;9.73e-13;1!UBERON:0004904;9.73e-13;1!UBERON:0001021;9.73e-13;1!UBERON:0002506;9.73e-13;1!UBERON:0001769;9.73e-13;1!UBERON:0000010;4.38e-12;8!UBERON:0001444;2.03e-10;48!UBERON:0000013;3.50e-10;5!UBERON:0002410;3.50e-10;5!UBERON:0000033;1.70e-08;50!UBERON:0001894;8.79e-08;7!UBERON:0000153;1.97e-07;54!UBERON:0007811;2.10e-07;52!UBERON:0003714;5.28e-07;2!UBERON:0005162;5.28e-07;2!UBERON:0000122;5.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.69e-54,21;UBERON:0002104,3.69e-54,21;UBERON:0007625,2.04e-51,11;UBERON:0000488,2.88e-47,4;UBERON:0000020,2.91e-47,24;UBERON:0001032,2.91e-47,24;UBERON:0004456,2.91e-47,24;UBERON:0000019,4.73e-46,20;UBERON:0000047,4.73e-46,20;UBERON:0010312,4.73e-46,20;UBERON:0004088,4.73e-46,20;UBERON:0010230,4.73e-46,20;UBERON:0003072,4.73e-46,20;UBERON:0004128,4.73e-46,20;UBERON:0003071,4.73e-46,20;UBERON:0001456,8.67e-42,22;UBERON:0001801,2.55e-40,14;UBERON:0001778,2.65e-36,3;UBERON:0001775,2.65e-36,3;UBERON:0002203,1.14e-31,6;UBERON:0001768,1.14e-31,6;UBERON:0002200,1.14e-31,6;UBERON:0005085,2.13e-29,31;UBERON:0010077,8.39e-27,4;UBERON:0005389,8.39e-27,4;UBERON:0000484,8.39e-27,4;UBERON:0002546,8.39e-27,4;UBERON:0000965,8.39e-27,4;UBERON:0001803,8.39e-27,4;UBERON:0003073,8.39e-27,4;UBERON:0005426,8.39e-27,4;UBERON:0000007,6.29e-25,2;UBERON:0003056,1.91e-21,61;UBERON:0001444,3.04e-18,49;UBERON:0006876,1.93e-17,11;UBERON:0000033,7.76e-16,56;UBERON:0003075,1.14e-15,82;UBERON:0007284,1.14e-15,82;UBERON:0002346,6.99e-15,86;UBERON:0000153,3.33e-14,62;UBERON:0007811,3.33e-14,62;UBERON:0000076,9.76e-14,8;UBERON:0003296,5.72e-13,4;UBERON:0010133,5.72e-13,4;UBERON:0002506,8.64e-13,1;UBERON:0001769,8.64e-13,1;UBERON:0000941,9.73e-13,1;UBERON:0001785,9.73e-13,1;UBERON:0002464,9.73e-13,1;UBERON:0004904,9.73e-13,1;UBERON:0001021,9.73e-13,1;UBERON:0003902,9.73e-13,1;UBERON:0005425,9.73e-13,1;UBERON:0010371,4.40e-12,104;UBERON:0000010,4.64e-12,8;UBERON:0000013,3.76e-10,5;UBERON:0002410,3.76e-10,5;UBERON:0004121,1.28e-09,171;UBERON:0000924,1.28e-09,171;UBERON:0006601,1.28e-09,171;UBERON:0010314,3.16e-09,132;UBERON:0000966,1.22e-08,6;UBERON:0005388,1.22e-08,6;UBERON:0001802,1.22e-08,6;UBERON:0001894,8.64e-08,7;UBERON:0006222,8.64e-08,7;UBERON:0003714,5.28e-07,2;UBERON:0005162,5.28e-07,2;UBERON:0000122,5.28e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3944063581885,6.20842312895179,17.6547919243183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,2.90484857173796,4.45742536566093,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54411029268673,0,0,0,0,0,0,2.88662684050547,14.6072310268597,2.93521735589554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1315655457474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830091809617385,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,3.14531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2437961482821,11.6107717589162,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,3.85973338553944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@SIX6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |||
|TSSclassifier=S | |||
|UniProt=O95475,Q6P051 | |||
|association_with_transcript=-68bp_to_NM_007374,uc001xfa.3_5end | |||
|coexpression_cluster_id=C1726 | |||
|description=CAGE_peak_2_at_SIX6_5end | |||
|id=chr14:60975858..60975869,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.87e-23!5;CL:0000064!1.32e-15!3;CL:0005012!1.32e-15!3;CL:0000067!1.32e-15!3;CL:0002304!1.32e-15!3;CL:0000075!5.11e-13!27;CL:0000306!1.42e-11!4;CL:0002222!1.42e-11!4;CL:0002224!1.42e-11!4;CL:0000710!3.36e-08!20;CL:0000133!3.18e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.65e-36;3!CL:0000067;2.65e-36;3!CL:0005012;2.65e-36;3!CL:0002304;2.65e-36;3!CL:0000075;6.04e-27;27!CL:0000306;8.39e-27;4!CL:0002222;8.39e-27;4!CL:0002224;8.39e-27;4!CL:0000710;1.02e-14;20!CL:0000342;9.73e-13;1!CL:0002565;9.73e-13;1!CL:0002321;1.28e-12;15!CL:0002322;2.84e-10;5!CL:0000333;3.50e-10;5!CL:0002077;3.03e-08;34!CL:0000147;5.18e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.65e-36,3;CL:0000067,2.65e-36,3;CL:0005012,2.65e-36,3;CL:0002304,2.65e-36,3;CL:0000075,6.04e-27,27;CL:0000306,8.39e-27,4;CL:0002222,8.39e-27,4;CL:0002224,8.39e-27,4;CL:0000710,1.02e-14,20;CL:0000342,8.64e-13,1;CL:0002565,8.64e-13,1;CL:0002322,2.84e-10,5;CL:0000133,8.41e-09,59;CL:0002077,1.26e-08,34;CL:0000147,5.06e-08,14;CL:0000221,3.85e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.48e-16;3!UBERON:0005425;9.73e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.24e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.31e-08,6 | |||
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|short_description=p2@SIX6 | |||
}} |
Revision as of 04:58, 11 September 2013
Short description: | p2@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -68bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.65e-36 | 3 |
ciliated epithelial cell | 2.65e-36 | 3 |
multi-ciliated epithelial cell | 2.65e-36 | 3 |
non-pigmented ciliary epithelial cell | 2.65e-36 | 3 |
columnar/cuboidal epithelial cell | 6.04e-27 | 27 |
crystallin accumulating cell | 8.39e-27 | 4 |
vertebrate lens cell | 8.39e-27 | 4 |
lens epithelial cell | 8.39e-27 | 4 |
neurecto-epithelial cell | 1.02e-14 | 20 |
pigment cell (sensu Vertebrata) | 8.64e-13 | 1 |
iris pigment epithelial cell | 8.64e-13 | 1 |
embryonic stem cell | 2.84e-10 | 5 |
neurectodermal cell | 8.41e-09 | 59 |
ecto-epithelial cell | 1.26e-08 | 34 |
pigment cell | 5.06e-08 | 14 |
ectodermal cell | 3.85e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.31e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.