FFCP PHASE1:Hg19::chr2:71730376..71730412,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr2:71730376..71730412,+|id=chr2:71730376..71730412,+|ontology_enrichment_celltype=CL:0000115!7.36e-26!35;CL:0002139!1.01e-22!24;CL:0002078!7.25e-19!44;CL:0000213!4.98e-18!57;CL:0000215!4.98e-18!57;CL:0000071!2.95e-14!18;CL:0002546!2.95e-14!18;CL:0005020!1.00e-10!6;CL:0002138!1.00e-10!6;CL:0005022!1.00e-10!6;CL:0000222!8.45e-10!119;CL:0002543!4.53e-07!6;CL:0000775!6.19e-07!3|ontology_enrichment_celltype_v019=CL:0000775;7.42e-35;3!CL:0002144;2.44e-33;3!CL:0000094;4.78e-23;8!CL:0002139;8.36e-22;24!CL:0000115;6.53e-18;36!CL:0000081;7.59e-17;11!CL:0002078;6.94e-16;45!CL:0000071;2.91e-15;18!CL:0000213;1.79e-12;58!CL:0000215;1.79e-12;58!CL:0002188;1.01e-09;5!CL:0002138;3.02e-08;6!CL:1000746;3.45e-07;7!CL:1000612;3.45e-07;7!CL:0000771;5.89e-07;2!CL:0002593;8.76e-07;2|ontology_enrichment_celltype_v019_2=CL:0000775,7.88e-35,3;CL:0002144,2.58e-33,3;CL:0000115,1.19e-23,36;CL:0000094,5.06e-23,8;CL:0002139,6.39e-22,24;CL:0002078,1.03e-18,45;CL:0000081,7.91e-17,11;CL:0000071,2.47e-15,18;CL:0002546,2.47e-15,18;CL:0000213,2.80e-14,58;CL:0000215,2.80e-14,58;CL:0002188,1.06e-09,5;CL:0005020,2.71e-08,6;CL:0002138,2.71e-08,6;CL:0005022,2.71e-08,6;CL:0000222,9.40e-08,121;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7;CL:0000771,6.07e-07,2|ontology_enrichment_development_v019=CL:0002546;2.91e-15;18!CL:0005022;3.02e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!2.95e-14!18;UBERON:0004638!2.95e-14!18;UBERON:0004852!2.95e-14!18;UBERON:0000487!6.43e-13!22;UBERON:0006914!6.98e-11!25;UBERON:0002049!2.12e-10!79;UBERON:0007798!2.12e-10!79;UBERON:0000055!4.29e-10!69;UBERON:0001009!1.74e-09!113;UBERON:0004535!1.36e-08!110;UBERON:0001473!8.88e-08!8;UBERON:0004536!8.88e-08!8;UBERON:0006558!8.88e-08!8;UBERON:0003081!9.98e-08!216;UBERON:0004872!1.28e-07!84;UBERON:0003914!4.99e-07!118|ontology_enrichment_uberon_v019=UBERON:0010523;2.44e-33;3!UBERON:0001915;2.44e-33;3!UBERON:0001982;2.44e-33;3!UBERON:0004638;2.91e-15;18!UBERON:0001986;2.91e-15;18!UBERON:0004852;2.91e-15;18!UBERON:0000487;1.77e-12;22!UBERON:0006914;5.67e-11;25!UBERON:0000490;3.18e-08;33!UBERON:0000074;3.45e-07;7!UBERON:0001229;3.45e-07;7!UBERON:0002456;8.76e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.58e-33,3;UBERON:0001915,2.58e-33,3;UBERON:0001982,2.58e-33,3;UBERON:0004638,2.47e-15,18;UBERON:0001986,2.47e-15,18;UBERON:0004852,2.47e-15,18;UBERON:0000487,1.55e-12,22;UBERON:0006914,5.05e-11,25;UBERON:0000055,1.74e-09,68;UBERON:0002049,3.74e-08,78;UBERON:0007798,3.74e-08,78;UBERON:0003914,4.63e-08,117;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0,0,1.22433556948361,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,0,0,0,1.67799774483962,0,0.417989933073621,1.55050055501597,1.42306505074684,0.66944122552934,1.20848795132744,1.52054421143703,1.46437234528902,0.367663080345869,0.81014194788176,0.17859945656816,0.44905874525234,0.337834441449967,0,4.74632829784064,0.366403487860815,2.63560834872127,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,4.49404214368309,11.966458368161,16.5766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,1.13733384070897,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr2:71730376..71730412,+ | |||
|id=chr2:71730376..71730412,+ | |||
|ontology_enrichment_celltype=CL:0000115!7.36e-26!35;CL:0002139!1.01e-22!24;CL:0002078!7.25e-19!44;CL:0000213!4.98e-18!57;CL:0000215!4.98e-18!57;CL:0000071!2.95e-14!18;CL:0002546!2.95e-14!18;CL:0005020!1.00e-10!6;CL:0002138!1.00e-10!6;CL:0005022!1.00e-10!6;CL:0000222!8.45e-10!119;CL:0002543!4.53e-07!6;CL:0000775!6.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;7.42e-35;3!CL:0002144;2.44e-33;3!CL:0000094;4.78e-23;8!CL:0002139;8.36e-22;24!CL:0000115;6.53e-18;36!CL:0000081;7.59e-17;11!CL:0002078;6.94e-16;45!CL:0000071;2.91e-15;18!CL:0000213;1.79e-12;58!CL:0000215;1.79e-12;58!CL:0002188;1.01e-09;5!CL:0002138;3.02e-08;6!CL:1000746;3.45e-07;7!CL:1000612;3.45e-07;7!CL:0000771;5.89e-07;2!CL:0002593;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,7.88e-35,3;CL:0002144,2.58e-33,3;CL:0000115,1.19e-23,36;CL:0000094,5.06e-23,8;CL:0002139,6.39e-22,24;CL:0002078,1.03e-18,45;CL:0000081,7.91e-17,11;CL:0000071,2.47e-15,18;CL:0002546,2.47e-15,18;CL:0000213,2.80e-14,58;CL:0000215,2.80e-14,58;CL:0002188,1.06e-09,5;CL:0005020,2.71e-08,6;CL:0002138,2.71e-08,6;CL:0005022,2.71e-08,6;CL:0000222,9.40e-08,121;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7;CL:0000771,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.91e-15;18!CL:0005022;3.02e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.95e-14!18;UBERON:0004638!2.95e-14!18;UBERON:0004852!2.95e-14!18;UBERON:0000487!6.43e-13!22;UBERON:0006914!6.98e-11!25;UBERON:0002049!2.12e-10!79;UBERON:0007798!2.12e-10!79;UBERON:0000055!4.29e-10!69;UBERON:0001009!1.74e-09!113;UBERON:0004535!1.36e-08!110;UBERON:0001473!8.88e-08!8;UBERON:0004536!8.88e-08!8;UBERON:0006558!8.88e-08!8;UBERON:0003081!9.98e-08!216;UBERON:0004872!1.28e-07!84;UBERON:0003914!4.99e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.44e-33;3!UBERON:0001915;2.44e-33;3!UBERON:0001982;2.44e-33;3!UBERON:0004638;2.91e-15;18!UBERON:0001986;2.91e-15;18!UBERON:0004852;2.91e-15;18!UBERON:0000487;1.77e-12;22!UBERON:0006914;5.67e-11;25!UBERON:0000490;3.18e-08;33!UBERON:0000074;3.45e-07;7!UBERON:0001229;3.45e-07;7!UBERON:0002456;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.58e-33,3;UBERON:0001915,2.58e-33,3;UBERON:0001982,2.58e-33,3;UBERON:0004638,2.47e-15,18;UBERON:0001986,2.47e-15,18;UBERON:0004852,2.47e-15,18;UBERON:0000487,1.55e-12,22;UBERON:0006914,5.05e-11,25;UBERON:0000055,1.74e-09,68;UBERON:0002049,3.74e-08,78;UBERON:0007798,3.74e-08,78;UBERON:0003914,4.63e-08,117;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0,0,1.22433556948361,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,0,0,0,1.67799774483962,0,0.417989933073621,1.55050055501597,1.42306505074684,0.66944122552934,1.20848795132744,1.52054421143703,1.46437234528902,0.367663080345869,0.81014194788176,0.17859945656816,0.44905874525234,0.337834441449967,0,4.74632829784064,0.366403487860815,2.63560834872127,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,4.49404214368309,11.966458368161,16.5766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,1.13733384070897,0.850468526382578,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.02586563574658,2.65013777824443,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.709618961301111,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64260490969995,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.751871343838829,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0,0,0.12729431655633,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr2:71730376..71730412,+ | |||
}} |
Revision as of 19:40, 12 September 2013
Short description: | p@chr2:71730376..71730412, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:71730376..71730412, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 7.88e-35 | 3 |
capillary endothelial cell | 2.58e-33 | 3 |
endothelial cell | 1.19e-23 | 36 |
granulocyte | 5.06e-23 | 8 |
endothelial cell of vascular tree | 6.39e-22 | 24 |
meso-epithelial cell | 1.03e-18 | 45 |
blood cell | 7.91e-17 | 11 |
blood vessel endothelial cell | 2.47e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.47e-15 | 18 |
lining cell | 2.80e-14 | 58 |
barrier cell | 2.80e-14 | 58 |
glomerular endothelial cell | 1.06e-09 | 5 |
lymphangioblast | 2.71e-08 | 6 |
endothelial cell of lymphatic vessel | 2.71e-08 | 6 |
vascular lymphangioblast | 2.71e-08 | 6 |
mesodermal cell | 9.40e-08 | 121 |
glomerular cell | 3.56e-07 | 7 |
kidney corpuscule cell | 3.56e-07 | 7 |
eosinophil | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.58e-33 | 3 |
endothelium of capillary | 2.58e-33 | 3 |
capillary | 2.58e-33 | 3 |
blood vessel endothelium | 2.47e-15 | 18 |
endothelium | 2.47e-15 | 18 |
cardiovascular system endothelium | 2.47e-15 | 18 |
simple squamous epithelium | 1.55e-12 | 22 |
squamous epithelium | 5.05e-11 | 25 |
vessel | 1.74e-09 | 68 |
vasculature | 3.74e-08 | 78 |
vascular system | 3.74e-08 | 78 |
epithelial tube | 4.63e-08 | 117 |
primitive nephron | 3.56e-07 | 7 |
renal glomerulus | 3.56e-07 | 7 |
renal corpuscle | 3.56e-07 | 7 |
glomerular capsule | 3.56e-07 | 7 |
metanephric mesenchyme | 3.56e-07 | 7 |
glomerular tuft | 3.56e-07 | 7 |
S-shaped body | 3.56e-07 | 7 |
renal vesicle | 3.56e-07 | 7 |
comma-shaped body | 3.56e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.