FFCP PHASE1:Hg19::chr13:24734939..24734950,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23222 | |||
|TSSclassifier=strong | |||
|UniProt=Q96N96 | |||
|association_with_transcript=52bp_to_ENST00000382095,uc001upf.1,uc001upg.1_5end | |||
|coexpression_cluster_id=C3359 | |||
|description=CAGE_peak_8_at_SPATA13_5end | |||
|id=chr13:24734939..24734950,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.28e-12;2!CL:0002032;8.23e-07;1!CL:0000557;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.09e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-34!57;UBERON:0005068!2.21e-34!57;UBERON:0006241!2.21e-34!57;UBERON:0007135!2.21e-34!57;UBERON:0005743!6.64e-30!86;UBERON:0001017!8.91e-30!82;UBERON:0001893!4.05e-28!34;UBERON:0002020!7.46e-28!34;UBERON:0003528!7.46e-28!34;UBERON:0002616!1.63e-27!59;UBERON:0002791!2.86e-27!33;UBERON:0000073!3.31e-27!94;UBERON:0001016!3.31e-27!94;UBERON:0002780!9.94e-27!41;UBERON:0001890!9.94e-27!41;UBERON:0006240!9.94e-27!41;UBERON:0007023!4.08e-26!115;UBERON:0000955!4.49e-26!69;UBERON:0006238!4.49e-26!69;UBERON:0001869!5.05e-26!32;UBERON:0003080!9.52e-26!42;UBERON:0003075!6.95e-23!86;UBERON:0007284!6.95e-23!86;UBERON:0002346!5.94e-21!90;UBERON:0000956!1.56e-19!25;UBERON:0000203!1.56e-19!25;UBERON:0000153!1.55e-18!129;UBERON:0007811!1.55e-18!129;UBERON:0003056!3.25e-18!61;UBERON:0000033!7.98e-18!123;UBERON:0002619!3.30e-17!22;UBERON:0001950!3.22e-15!20;UBERON:0004121!1.04e-14!169;UBERON:0000924!8.14e-14!173;UBERON:0006601!8.14e-14!173;UBERON:0000062!3.66e-12!511;UBERON:0000025!3.10e-11!194;UBERON:0000477!8.06e-11!286;UBERON:0000064!1.36e-10!219;UBERON:0002308!7.70e-10!9;UBERON:0000125!7.70e-10!9;UBERON:0003076!1.18e-09!15;UBERON:0003057!1.18e-09!15;UBERON:0000481!3.62e-09!347;UBERON:0004111!7.25e-09!241;UBERON:0000475!2.08e-08!365;UBERON:0000483!2.80e-08!309;UBERON:0009663!3.11e-08!7;UBERON:0004732!3.21e-08!13;UBERON:0000119!3.25e-08!312;UBERON:0002420!8.31e-08!9;UBERON:0007245!8.31e-08!9;UBERON:0010009!8.31e-08!9;UBERON:0010011!8.31e-08!9;UBERON:0000454!8.31e-08!9;UBERON:0004733!3.10e-07!12;UBERON:0002028!3.10e-07!12;UBERON:0007277!3.10e-07!12;UBERON:0002298!6.88e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.24e-25;41!UBERON:0001890;8.24e-25;41!UBERON:0002791;1.43e-23;32!UBERON:0001893;1.19e-22;34!UBERON:0000073;4.35e-21;53!UBERON:0002616;4.35e-21;53!UBERON:0003528;9.64e-20;34!UBERON:0002020;9.64e-20;34!UBERON:0001869;1.02e-19;32!UBERON:0000956;7.93e-16;25!UBERON:0000203;7.93e-16;25!UBERON:0002619;2.48e-14;22!UBERON:0005162;4.25e-13;2!UBERON:0000122;4.25e-13;2!UBERON:0009663;5.62e-13;7!UBERON:0001897;2.28e-12;2!UBERON:0001954;2.28e-12;2!UBERON:0001875;2.28e-12;2!UBERON:0003022;2.28e-12;2!UBERON:0002421;2.28e-12;2!UBERON:0006514;2.28e-12;2!UBERON:0010225;2.28e-12;2!UBERON:0002600;2.28e-12;2!UBERON:0000349;1.08e-10;5!UBERON:0001016;2.27e-10;83!UBERON:0002420;4.02e-10;9!UBERON:0000125;4.02e-10;9!UBERON:0007245;4.02e-10;9!UBERON:0002308;4.02e-10;9!UBERON:0010009;4.02e-10;9!UBERON:0010011;4.02e-10;9!UBERON:0000454;4.02e-10;9!UBERON:0001017;6.91e-10;75!UBERON:0002298;3.46e-09;6!UBERON:0001950;5.50e-09;20!UBERON:0001896;8.38e-09;3!UBERON:0005290;8.38e-09;3!UBERON:0000955;8.56e-08;68!UBERON:0000941;2.09e-07;1!UBERON:0001785;2.09e-07;1!UBERON:0002464;2.09e-07;1!UBERON:0004904;2.09e-07;1!UBERON:0001021;2.09e-07;1!UBERON:0002336;2.28e-07;1!UBERON:0011215;2.28e-07;1!UBERON:0001018;2.28e-07;1!UBERON:0002473;2.28e-07;1!UBERON:0005340;2.28e-07;1!UBERON:0003544;2.28e-07;1!UBERON:0005970;2.28e-07;1!UBERON:0002316;2.28e-07;1!UBERON:0001020;2.28e-07;1!UBERON:0002437;2.28e-07;1!UBERON:0007023;2.30e-07;114!UBERON:0004732;2.56e-07;13!UBERON:0001000;3.17e-07;1!UBERON:0005352;3.17e-07;1!UBERON:0001882;8.23e-07;1!UBERON:0002038;8.23e-07;1!UBERON:0009661;8.23e-07;1!UBERON:0002950;8.23e-07;1!UBERON:0005403;8.23e-07;1!UBERON:0001891;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-33,53;UBERON:0002616,2.56e-33,53;UBERON:0001049,2.39e-31,56;UBERON:0005068,2.39e-31,56;UBERON:0006241,2.39e-31,56;UBERON:0007135,2.39e-31,56;UBERON:0002780,1.45e-30,41;UBERON:0001890,1.45e-30,41;UBERON:0003080,1.45e-30,41;UBERON:0006240,1.45e-30,41;UBERON:0001893,4.07e-28,34;UBERON:0002791,1.42e-25,32;UBERON:0001017,3.24e-25,81;UBERON:0001016,7.84e-25,89;UBERON:0000955,9.28e-25,68;UBERON:0006238,9.28e-25,68;UBERON:0003528,5.81e-24,34;UBERON:0002020,5.81e-24,34;UBERON:0003075,9.40e-23,82;UBERON:0007284,9.40e-23,82;UBERON:0003056,1.92e-22,61;UBERON:0001869,1.10e-21,32;UBERON:0002346,1.66e-21,86;UBERON:0010371,4.46e-17,104;UBERON:0000956,1.39e-15,25;UBERON:0000203,1.39e-15,25;UBERON:0007023,2.08e-15,114;UBERON:0002619,3.88e-14,22;UBERON:0011216,1.03e-13,223;UBERON:0004121,1.51e-13,171;UBERON:0000924,1.51e-13,171;UBERON:0006601,1.51e-13,171;UBERON:0009663,4.18e-13,7;UBERON:0005162,4.39e-13,2;UBERON:0000122,4.39e-13,2;UBERON:0001897,9.39e-13,2;UBERON:0010225,9.39e-13,2;UBERON:0010314,1.41e-12,132;UBERON:0001875,1.58e-12,2;UBERON:0006514,1.58e-12,2;UBERON:0001954,2.35e-12,2;UBERON:0003022,2.35e-12,2;UBERON:0002421,2.35e-12,2;UBERON:0002600,2.35e-12,2;UBERON:0000025,1.29e-11,192;UBERON:0004111,1.97e-11,240;UBERON:0000349,1.08e-10,5;UBERON:0002420,3.21e-10,9;UBERON:0000125,3.21e-10,9;UBERON:0007245,3.21e-10,9;UBERON:0002308,3.21e-10,9;UBERON:0010009,3.21e-10,9;UBERON:0010011,3.21e-10,9;UBERON:0000454,3.21e-10,9;UBERON:0002298,3.33e-09,6;UBERON:0001950,7.79e-09,20;UBERON:0001896,8.41e-09,3;UBERON:0005290,8.41e-09,3;UBERON:0010096,8.41e-09,3;UBERON:0000941,2.09e-07,1;UBERON:0001785,2.09e-07,1;UBERON:0002464,2.09e-07,1;UBERON:0004904,2.09e-07,1;UBERON:0001021,2.09e-07,1;UBERON:0003902,2.09e-07,1;UBERON:0005425,2.09e-07,1;UBERON:0002336,2.36e-07,1;UBERON:0011215,2.36e-07,1;UBERON:0001018,2.36e-07,1;UBERON:0002473,2.36e-07,1;UBERON:0005340,2.36e-07,1;UBERON:0003544,2.36e-07,1;UBERON:0005970,2.36e-07,1;UBERON:0002316,2.36e-07,1;UBERON:0001020,2.36e-07,1;UBERON:0002437,2.36e-07,1;UBERON:0004732,2.50e-07,13;UBERON:0001000,3.57e-07,1;UBERON:0005352,3.57e-07,1;UBERON:0002038,7.15e-07,1;UBERON:0009661,7.15e-07,1;UBERON:0002950,7.15e-07,1;UBERON:0001891,7.15e-07,1;UBERON:0009616,7.15e-07,1;UBERON:0010286,7.15e-07,1;UBERON:0001882,8.02e-07,1;UBERON:0005403,8.02e-07,1;UBERON:0002784,8.75e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,1.14494394852423,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.523916301990851,0,0,0,0,0,0.476981248610684,0.571994910780128,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,2.37600571456411,1.7308685049499,0,0,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0,0.179389635688862,0,0.211931901159562,1.20036438433761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,3.9313088667105,1.77236972004421,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,2.28685161800217,1.30139853857622,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0.713715955188647,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.309123034943167,0,0.165018999841176,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,1.03051603426729,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0.561421621224659,0,0,0,1.13654458722565,0,0,0,0,0.844016498463076,0.222617410045812,0.824019371133798,0,0,0.276283915531148,0.503865495708552,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0.7812832832557,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0.442317039724898,0.295547618953547,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.796118080530053,0,0,0,0.104421949505455,3.16785325009182,0,0.937057782901357,0.182454789215666,0.19566461893209,0,2.36750641709634,2.41981432097328,0.30607276163049,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0.293977192243133,0.174118413160805,0.34945333648406,0,0,0,0.164230914106418,0,0,0.225980740780532,0.274083849293502,0,1.01297273529406,0,0,0.640358984218058,0.19980960958213,0.72045208577053,0,0.171594997861965,0.14405479798815,0.248505071130865,0,0,0,0,0.288950589901519,2.40168115483916,1.50595916781192,1.27746588066972,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.404421263125109,0.590564889088493,0,2.38568906942791,1.36203406111576,0.321506296930038,0.137539436597234,0,0,0,0.728994679896296,0,0.236417121897595,0.577000469484979,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.46552233678082,0,0.775697738169303,0.66116300871345,0.171086837884329,0.704815022316672,0.213574825135389,0.157204305099666,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0.306345576763462,0,0.314108192500469,0.886068179966986,0.610131324509816,0.3755727921195,2.29363678276028,0.776503360757966,2.42175971471395,0.138348634936231,0,0.151649117541648,0.856396000634902,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,1.41304295212211,0,1.27707087245721,1.02558182120378,0.504143392443436,0.414943514785307,0.322951291263702,4.28308260777463,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0.376051641746286,0,1.56302802246618,0,0.163771917510097,0.295712172434091,0.742913430802341,0.781078098613847,0.620060389503552,1.14148458349032,1.64092442705466,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,1.42736439251347,0.986591603442736,0,0.111231401892069,0.313972371402056,0.785577949580009,0,0,0.215927591218621,0,0.714765441766563,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0.31020638566432,0,0,1.76670420507437,0,0,0,0,0,0,0.198950775161368,0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| |||
|short_description=p8@SPATA13 | |||
}} |
Revision as of 16:58, 11 January 2014
Short description: | p8@SPATA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPATA13_5end |
Coexpression cluster: | C3359_Dendritic_Neural_signet_corpus_caudate_optic_Fibroblast |
Association with transcript: | 52bp_to_ENST00000382095, uc001upf.1, uc001upg.1_5end |
EntrezGene: | SPATA13 |
HGNC: | 23222 |
UniProt: | Q96N96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data