FFCP PHASE1:Hg19::chr13:53313496..53313507,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11061 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17005 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKI9 | |||
|association_with_transcript=-9bp_to_ENST00000431550_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_LECT1_5end | |||
|id=chr13:53313496..53313507,- | |||
|ontology_enrichment_celltype=CL:0002322!1.35e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.31e-14;1!CL:0000037;1.31e-14;1!CL:0001024;1.31e-14;1!CL:0000557;1.31e-14;1!CL:0002322;1.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.41e-14,1;CL:0002322,1.09e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.71e-15;1!UBERON:0010122;5.94e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.70e-50!57;UBERON:0005068!2.70e-50!57;UBERON:0006241!2.70e-50!57;UBERON:0007135!2.70e-50!57;UBERON:0001017!4.12e-42!82;UBERON:0005743!9.20e-42!86;UBERON:0000073!1.39e-40!94;UBERON:0001016!1.39e-40!94;UBERON:0002616!1.41e-40!59;UBERON:0003075!1.11e-34!86;UBERON:0007284!1.11e-34!86;UBERON:0002346!1.47e-34!90;UBERON:0000955!2.15e-34!69;UBERON:0006238!2.15e-34!69;UBERON:0002780!8.60e-32!41;UBERON:0001890!8.60e-32!41;UBERON:0006240!8.60e-32!41;UBERON:0003080!7.46e-31!42;UBERON:0001893!1.25e-30!34;UBERON:0002020!1.94e-30!34;UBERON:0003528!1.94e-30!34;UBERON:0002791!7.55e-29!33;UBERON:0001869!2.26e-27!32;UBERON:0007023!8.88e-25!115;UBERON:0000924!3.40e-22!173;UBERON:0006601!3.40e-22!173;UBERON:0003056!3.79e-22!61;UBERON:0004121!7.69e-22!169;UBERON:0003076!3.75e-21!15;UBERON:0003057!3.75e-21!15;UBERON:0002308!2.42e-19!9;UBERON:0000125!2.42e-19!9;UBERON:0000033!5.16e-19!123;UBERON:0000153!8.48e-19!129;UBERON:0007811!8.48e-19!129;UBERON:0004732!3.79e-18!13;UBERON:0004733!4.65e-16!12;UBERON:0002028!4.65e-16!12;UBERON:0007277!4.65e-16!12;UBERON:0009663!1.77e-15!7;UBERON:0000956!1.81e-15!25;UBERON:0000203!1.81e-15!25;UBERON:0002420!8.63e-15!9;UBERON:0007245!8.63e-15!9;UBERON:0010009!8.63e-15!9;UBERON:0010011!8.63e-15!9;UBERON:0000454!8.63e-15!9;UBERON:0002619!1.42e-13!22;UBERON:0002298!5.95e-13!8;UBERON:0001950!6.68e-13!20;UBERON:0002680!1.77e-10!9;UBERON:0001895!1.77e-10!9;UBERON:0010092!1.77e-10!9;UBERON:0000369!3.47e-10!4;UBERON:0002435!3.47e-10!4;UBERON:0000204!3.47e-10!4;UBERON:0010082!3.47e-10!4;UBERON:0005383!4.56e-08!3;UBERON:0005382!4.56e-08!3;UBERON:0001871!8.45e-08!7;UBERON:0000200!8.73e-08!6;UBERON:0000988!1.22e-07!3;UBERON:0000025!1.24e-07!194;UBERON:0001896!1.24e-07!3;UBERON:0005290!1.24e-07!3;UBERON:0010096!1.24e-07!3;UBERON:0006331!6.27e-07!3;UBERON:0002240!7.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.78e-30;7!UBERON:0000369;2.45e-30;4!UBERON:0002435;2.45e-30;4!UBERON:0000204;2.45e-30;4!UBERON:0005162;7.57e-28;2!UBERON:0000122;7.57e-28;2!UBERON:0002420;8.45e-24;9!UBERON:0000125;8.45e-24;9!UBERON:0007245;8.45e-24;9!UBERON:0002308;8.45e-24;9!UBERON:0010009;8.45e-24;9!UBERON:0010011;8.45e-24;9!UBERON:0000454;8.45e-24;9!UBERON:0005383;1.24e-18;3!UBERON:0005382;1.24e-18;3!UBERON:0000941;4.71e-15;1!UBERON:0001785;4.71e-15;1!UBERON:0002464;4.71e-15;1!UBERON:0004904;4.71e-15;1!UBERON:0001021;4.71e-15;1!UBERON:0001882;1.31e-14;1!UBERON:0002336;1.31e-14;1!UBERON:0001874;1.31e-14;1!UBERON:0011215;1.31e-14;1!UBERON:0001018;1.31e-14;1!UBERON:0002473;1.31e-14;1!UBERON:0005340;1.31e-14;1!UBERON:0003544;1.31e-14;1!UBERON:0005970;1.31e-14;1!UBERON:0002316;1.31e-14;1!UBERON:0001020;1.31e-14;1!UBERON:0005403;1.31e-14;1!UBERON:0002437;1.31e-14;1!UBERON:0002780;6.72e-10;41!UBERON:0001890;6.72e-10;41!UBERON:0000073;5.81e-09;53!UBERON:0002616;5.81e-09;53!UBERON:0001893;3.03e-08;34!UBERON:0003714;3.56e-08;2!UBERON:0001897;5.94e-08;2!UBERON:0001873;5.94e-08;2!UBERON:0001875;5.94e-08;2!UBERON:0006514;5.94e-08;2!UBERON:0010225;5.94e-08;2!UBERON:0001017;5.30e-07;75!UBERON:0002791;9.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.93e-30,7;UBERON:0000369,2.87e-30,4;UBERON:0002435,2.87e-30,4;UBERON:0000204,2.87e-30,4;UBERON:0010082,2.87e-30,4;UBERON:0005162,6.20e-28,2;UBERON:0000122,6.20e-28,2;UBERON:0002420,9.00e-24,9;UBERON:0000125,9.00e-24,9;UBERON:0007245,9.00e-24,9;UBERON:0002308,9.00e-24,9;UBERON:0010009,9.00e-24,9;UBERON:0010011,9.00e-24,9;UBERON:0000454,9.00e-24,9;UBERON:0005383,9.50e-19,3;UBERON:0005382,9.50e-19,3;UBERON:0000941,4.73e-15,1;UBERON:0001785,4.73e-15,1;UBERON:0002464,4.73e-15,1;UBERON:0004904,4.73e-15,1;UBERON:0001021,4.73e-15,1;UBERON:0003902,4.73e-15,1;UBERON:0005425,4.73e-15,1;UBERON:0001874,6.22e-15,1;UBERON:0002336,1.07e-14,1;UBERON:0011215,1.07e-14,1;UBERON:0001018,1.07e-14,1;UBERON:0002473,1.07e-14,1;UBERON:0005340,1.07e-14,1;UBERON:0003544,1.07e-14,1;UBERON:0005970,1.07e-14,1;UBERON:0002316,1.07e-14,1;UBERON:0001020,1.07e-14,1;UBERON:0002437,1.07e-14,1;UBERON:0001882,2.41e-14,1;UBERON:0005403,2.41e-14,1;UBERON:0000073,1.82e-11,53;UBERON:0002616,1.82e-11,53;UBERON:0002780,4.31e-11,41;UBERON:0001890,4.31e-11,41;UBERON:0003080,4.31e-11,41;UBERON:0006240,4.31e-11,41;UBERON:0001049,7.80e-11,56;UBERON:0005068,7.80e-11,56;UBERON:0006241,7.80e-11,56;UBERON:0007135,7.80e-11,56;UBERON:0003056,5.36e-10,61;UBERON:0003075,1.77e-09,82;UBERON:0007284,1.77e-09,82;UBERON:0001893,1.89e-09,34;UBERON:0002346,5.26e-09,86;UBERON:0000955,1.02e-08,68;UBERON:0006238,1.02e-08,68;UBERON:0001016,1.80e-08,89;UBERON:0007023,1.88e-08,114;UBERON:0003714,3.56e-08,2;UBERON:0001897,5.02e-08,2;UBERON:0010225,5.02e-08,2;UBERON:0001875,5.74e-08,2;UBERON:0006514,5.74e-08,2;UBERON:0001873,7.03e-08,2;UBERON:0010122,7.03e-08,2;UBERON:0010371,2.54e-07,104;UBERON:0001017,2.93e-07,81;UBERON:0010314,4.36e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0.229240217243854,0,0,0,0,0.309632246632152,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0.502497330513487,1.5644487552606,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.795178609928912,1.16193942869518,0.725627385107593,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.665574309221114,0.807253238237985,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0.991486114072017,0,0,0,0,0,0,1.02766760154335,0,0.159633859057151,0.615349092722265,0,0.553258019713743,0.161475645631851,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0,0.317079050969534,0,0,0,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,1.01954599465248,0.263091094251396,0,0,0,1.57115589916002,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0.506794004045748,0.203977659483963,0.534434810531121,0,0.250707539292375,0.378893491091197,1.07185652062471,0,1.24119595034274,0,0.714193294391221,0,0,0,0,1.0105859447911,0,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@LECT1 | |||
}} |
Revision as of 17:54, 11 January 2014
Short description: | p3@LECT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LECT1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -9bp_to_ENST00000431550_5end |
EntrezGene: | LECT1 |
HGNC: | 17005 |
UniProt: | E9PKI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.41e-14 | 1 |
embryonic stem cell | 1.09e-11 | 5 |