FF:11881-125C9: Difference between revisions

Revision as of 15:45, 15 May 2017

Name:	CD14+ monocytes - treated with IFN + N-hexane, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs13490
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	female
age	21
cell type	monocyte
cell line	NA
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	D5-2
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005007

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13490		CAGE		DRX008152		DRR009024

Accession ID Hg19

Library id		BAM		CTSS
CNhs13490		DRZ000449		DRZ001834

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0.154
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.1
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.543
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.47
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0109
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.154
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.755
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0313
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.281
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.154
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.443
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.405
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.843
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.12
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.268
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.231
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.154
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0901
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0.358
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.993
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0.358
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.865
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.551
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.551
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.867
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.366
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.154
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.388
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.496
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0.644
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.268
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.709
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.605
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.154
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.816
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.429
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.154
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.6
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.432
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0.154
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.738
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0.644
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.154
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.154
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.268
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.268
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13490

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.50005e-8
MA0003.1	MA0003.1	0.317
MA0004.1	MA0004.1	0.551
MA0006.1	MA0006.1	0.953
MA0007.1	MA0007.1	0.735
MA0009.1	MA0009.1	0.373
MA0014.1	MA0014.1	0.649
MA0017.1	MA0017.1	0.0229
MA0018.2	MA0018.2	0.487
MA0019.1	MA0019.1	0.738
MA0024.1	MA0024.1	0.00162
MA0025.1	MA0025.1	0.022
MA0027.1	MA0027.1	0.93
MA0028.1	MA0028.1	0.154
MA0029.1	MA0029.1	0.296
MA0030.1	MA0030.1	0.445
MA0031.1	MA0031.1	0.837
MA0035.2	MA0035.2	0.341
MA0038.1	MA0038.1	0.047
MA0039.2	MA0039.2	0.994
MA0040.1	MA0040.1	0.107
MA0041.1	MA0041.1	0.98
MA0042.1	MA0042.1	0.806
MA0043.1	MA0043.1	0.00112
MA0046.1	MA0046.1	0.174
MA0047.2	MA0047.2	0.592
MA0048.1	MA0048.1	0.965
MA0050.1	MA0050.1	8.46872e-25
MA0051.1	MA0051.1	5.2167e-16
MA0052.1	MA0052.1	0.451
MA0055.1	MA0055.1	0.508
MA0057.1	MA0057.1	0.901
MA0058.1	MA0058.1	0.35
MA0059.1	MA0059.1	0.492
MA0060.1	MA0060.1	2.46421e-11
MA0061.1	MA0061.1	2.7522e-6
MA0062.2	MA0062.2	0.344
MA0065.2	MA0065.2	0.00727
MA0066.1	MA0066.1	0.0784
MA0067.1	MA0067.1	2.55508e-4
MA0068.1	MA0068.1	0.581
MA0069.1	MA0069.1	0.527
MA0070.1	MA0070.1	0.00211
MA0071.1	MA0071.1	0.396
MA0072.1	MA0072.1	0.834
MA0073.1	MA0073.1	0.391
MA0074.1	MA0074.1	0.256
MA0076.1	MA0076.1	0.185
MA0077.1	MA0077.1	0.171
MA0078.1	MA0078.1	0.503
MA0079.2	MA0079.2	0.617
MA0080.2	MA0080.2	7.8663e-15
MA0081.1	MA0081.1	2.55599e-4
MA0083.1	MA0083.1	0.479
MA0084.1	MA0084.1	0.914
MA0087.1	MA0087.1	0.855
MA0088.1	MA0088.1	0.558
MA0090.1	MA0090.1	0.122
MA0091.1	MA0091.1	0.466
MA0092.1	MA0092.1	0.186
MA0093.1	MA0093.1	0.622
MA0099.2	MA0099.2	2.63568e-32
MA0100.1	MA0100.1	0.778
MA0101.1	MA0101.1	4.83733e-5
MA0102.2	MA0102.2	9.51198e-9
MA0103.1	MA0103.1	0.39
MA0104.2	MA0104.2	0.981
MA0105.1	MA0105.1	2.44481e-8
MA0106.1	MA0106.1	0.741
MA0107.1	MA0107.1	1.64107e-6
MA0108.2	MA0108.2	0.0323
MA0111.1	MA0111.1	0.455
MA0112.2	MA0112.2	8.34784e-5
MA0113.1	MA0113.1	0.538
MA0114.1	MA0114.1	0.158
MA0115.1	MA0115.1	0.839
MA0116.1	MA0116.1	2.66716e-4
MA0117.1	MA0117.1	0.224
MA0119.1	MA0119.1	0.358
MA0122.1	MA0122.1	0.684
MA0124.1	MA0124.1	0.872
MA0125.1	MA0125.1	0.442
MA0131.1	MA0131.1	0.351
MA0135.1	MA0135.1	0.981
MA0136.1	MA0136.1	4.49022e-15
MA0137.2	MA0137.2	1.02123e-18
MA0138.2	MA0138.2	0.888
MA0139.1	MA0139.1	0.917
MA0140.1	MA0140.1	0.278
MA0141.1	MA0141.1	0.0885
MA0142.1	MA0142.1	0.577
MA0143.1	MA0143.1	0.59
MA0144.1	MA0144.1	3.47101e-7
MA0145.1	MA0145.1	0.229
MA0146.1	MA0146.1	0.0821
MA0147.1	MA0147.1	0.941
MA0148.1	MA0148.1	0.77
MA0149.1	MA0149.1	0.299
MA0150.1	MA0150.1	2.27683e-14
MA0152.1	MA0152.1	0.94
MA0153.1	MA0153.1	0.0345
MA0154.1	MA0154.1	0.00232
MA0155.1	MA0155.1	0.829
MA0156.1	MA0156.1	5.55096e-10
MA0157.1	MA0157.1	0.507
MA0159.1	MA0159.1	0.0169
MA0160.1	MA0160.1	0.0279
MA0162.1	MA0162.1	0.944
MA0163.1	MA0163.1	1.05913e-6
MA0164.1	MA0164.1	0.83
MA0258.1	MA0258.1	0.00209
MA0259.1	MA0259.1	0.543

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13490

Novel motif	Logo	P-value
1	1	0.112
10	10	0.0238
100	100	0.813
101	101	0.845
102	102	0.586
103	103	0.244
104	104	0.622
105	105	0.269
106	106	3.16887e-4
107	107	0.218
108	108	0.992
109	109	0.191
11	11	0.14
110	110	0.177
111	111	0.0717
112	112	0.327
113	113	0.53
114	114	0.00884
115	115	0.18
116	116	0.865
117	117	0.0808
118	118	0.22
119	119	0.153
12	12	0.415
120	120	0.477
121	121	0.586
122	122	0.552
123	123	0.196
124	124	0.792
125	125	0.507
126	126	0.297
127	127	0.31
128	128	0.0324
129	129	0.426
13	13	0.171
130	130	0.143
131	131	0.411
132	132	0.113
133	133	0.908
134	134	0.469
135	135	0.406
136	136	0.913
137	137	0.0135
138	138	0.134
139	139	0.0663
14	14	0.442
140	140	0.311
141	141	0.192
142	142	0.298
143	143	0.0432
144	144	0.797
145	145	0.504
146	146	0.702
147	147	0.417
148	148	0.0127
149	149	0.768
15	15	0.144
150	150	0.453
151	151	0.256
152	152	0.0973
153	153	0.664
154	154	0.479
155	155	0.747
156	156	0.53
157	157	0.61
158	158	0.0981
159	159	0.808
16	16	0.34
160	160	0.46
161	161	0.499
162	162	0.308
163	163	0.287
164	164	0.207
165	165	0.0618
166	166	0.63
167	167	0.291
168	168	0.223
169	169	0.00743
17	17	0.23
18	18	0.178
19	19	0.265
2	2	0.92
20	20	0.389
21	21	0.396
22	22	0.197
23	23	0.031
24	24	0.224
25	25	0.354
26	26	0.0649
27	27	0.805
28	28	0.476
29	29	0.304
3	3	0.084
30	30	0.617
31	31	0.846
32	32	0.8
33	33	0.347
34	34	0.497
35	35	0.192
36	36	0.134
37	37	0.0687
38	38	0.467
39	39	0.786
4	4	0.894
40	40	0.247
41	41	0.0499
42	42	0.356
43	43	0.0392
44	44	0.655
45	45	0.771
46	46	0.162
47	47	0.449
48	48	0.42
49	49	0.123
5	5	0.175
50	50	0.95
51	51	0.343
52	52	0.245
53	53	0.352
54	54	0.283
55	55	0.358
56	56	0.685
57	57	0.844
58	58	0.11
59	59	0.183
6	6	0.716
60	60	0.0249
61	61	0.65
62	62	0.0354
63	63	0.442
64	64	0.489
65	65	0.237
66	66	0.267
67	67	0.478
68	68	0.825
69	69	0.605
7	7	0.304
70	70	0.0187
71	71	0.0517
72	72	0.115
73	73	0.105
74	74	0.125
75	75	0.114
76	76	0.382
77	77	0.401
78	78	0.105
79	79	0.0563
8	8	0.387
80	80	0.147
81	81	0.328
82	82	0.105
83	83	0.394
84	84	0.43
85	85	0.0171
86	86	0.0357
87	87	0.496
88	88	0.529
89	89	0.294
9	9	0.275
90	90	0.0783
91	91	0.333
92	92	0.175
93	93	0.176
94	94	0.049
95	95	0.455
96	96	0.318
97	97	0.768
98	98	0.075
99	99	0.122

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13490

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011443 CD14-positive monocytes - treated with IFN + N-hexane sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000629 (IFN and N-hexane treatment sample)
0011443 (CD14-positive monocytes - treated with IFN + N-hexane sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.41!2582.07!PLEK;;chr16:85932760..85932775,+!p1@IRF8!3.03!1066.41!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.69!488.45!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.61!402.36!ZNF385A;;chr7:115670804..115670825,-!p1@TFEC!2.28!190.52!TFEC;;chr6:36355431..36355466,-!p1@ETV7!2.18!151.31!ETV7;;chr11:47399947..47399961,-!p3@SPI1!2.14!138.10!SPI1;;chr6:106534192..106534224,+!p1@PRDM1!2.06!308.59!PRDM1;;chr1:25256756..25256774,-!p1@RUNX3!2.04!198.19!RUNX3;;chr20:39317868..39317884,-!p1@MAFB!1.98!1041.69!MAFB;;chr11:64764435..64764449,-!p1@BATF2!1.96!123.18!BATF2;;chr5:131826457..131826514,-!p1@IRF1!1.95!3229.50!IRF1;;chr10:35484053..35484076,+!p1@CREM!1.89!185.41!CREM;;chr11:47400062..47400077,-!p2@SPI1!1.89!76.29!SPI1;;chr7:128577972..128578047,+!p1@IRF5!1.88!114.65!IRF5;;chr2:231084639..231084654,-!p2@SP110!1.87!118.06!SP110;;chr11:615942..615957,-!p1@IRF7!1.86!643.17!IRF7;;chr21:34442439..34442455,+!p1@OLIG1!1.86!70.75!OLIG1;;chr6:106534230..106534254,+!p2@PRDM1!1.84!164.95!PRDM1;;chr2:70142232..70142251,+!p1@MXD1!1.83!357.18!MXD1;;chr12:54778351..54778378,-!p6@ZNF385A!1.82!64.79!ZNF385A;;chr11:47400032..47400043,-!p5@SPI1!1.82!64.36!SPI1;;chr11:47399996..47400014,-!p4@SPI1!1.81!63.51!SPI1;;chr10:64576105..64576133,-!p1@EGR2!1.78!118.92!EGR2;;chr19:33793430..33793447,-!p1@CEBPA!1.75!222.06!CEBPA;;chr21:30671690..30671762,+!p2@BACH1!1.73!172.62!BACH1;;chr19:50432132..50432217,+!p2@ATF5!1.70!57.54!ATF5;;chr21:36260295..36260310,-!p3@RUNX1!1.69!76.72!RUNX1;;chr7:50344289..50344323,+!p1@IKZF1!1.68!46.46!IKZF1;;chr14:75988771..75988826,+!p1@BATF!1.65!57.11!BATF;;chr2:68592394..68592405,+!p2@PLEK!1.65!43.47!PLEK;;chr16:31885093..31885165,+!p1@ZNF267!1.63!606.52!ZNF267;;chr2:97202480..97202499,+!p1@ARID5A!1.62!395.11!ARID5A;;chr6:144385698..144385742,-!p2@PLAGL1!1.62!48.59!PLAGL1;;chr2:145277640..145277771,-!p1@ZEB2!1.60!494.85!ZEB2;;chr14:75988831..75988847,+!p2@BATF!1.59!37.51!BATF;;chr1:158985493..158985535,+!p4@IFI16!1.58!55.84!IFI16;;chr17:45810594..45810608,+!p1@TBX21!1.56!34.95!TBX21;;chr19:45971246..45971265,+!p1@FOSB!1.55!606.09!FOSB;;chr12:11802753..11802834,+!p2@ETV6!1.55!161.54!ETV6;;chr10:51572408..51572454,+!p3@NCOA4!1.54!187.97!NCOA4;;chr11:65430554..65430579,-!p3@RELA!1.54!83.97!RELA;;chr1:158979872..158979898,+!p3@IFI16!1.50!92.06!IFI16;;chr10:51572339..51572376,+!p4@NCOA4!1.50!67.77!NCOA4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.48!29.41!ZBED1;;chr21:30671235..30671253,+!p1@BACH1!1.47!348.23!BACH1;;chr21:36421535..36421610,-!p2@RUNX1!1.46!95.47!RUNX1;;chr11:615570..615721,-!p2@IRF7!1.46!54.13!IRF7;;chr11:47400045..47400060,-!p6@SPI1!1.46!27.70!SPI1;;chrX:129244454..129244488,-!p1@ELF4!1.45!190.10!ELF4;;chr11:65430535..65430549,-!p4@RELA!1.44!30.69!RELA;;chr12:48298765..48298783,-!p2@VDR!1.42!52.00!VDR;;chr12:72056800..72056834,+!p1@THAP2!1.42!33.67!THAP2;;chr4:185395590..185395627,-!p3@IRF2!1.41!30.69!IRF2;;chr2:231090471..231090504,+!p2@SP140!1.41!24.72!SP140;;chr2:145275162..145275202,-!p2@ZEB2!1.40!137.24!ZEB2;;chr12:56415246..56415286,+!p2@IKZF4!1.40!23.87!IKZF4;;chr6:391743..391759,+!p1@IRF4!1.40!23.87!IRF4;;chr1:212782094..212782109,+!p1@ATF3!1.39!618.88!ATF3;;chr19:45251395..45251432,+!p8@BCL3!1.39!23.44!BCL3;;chrX:129244430..129244442,-!p5@ELF4!1.39!23.44!ELF4;;chr16:79634624..79634642,-!p1@MAF!1.37!86.52!MAF;;chr12:54694758..54694805,-!p1@NFE2!1.36!26.43!NFE2;;chr11:47399920..47399931,-!p7@SPI1!1.35!21.31!SPI1;;chr21:30672433..30672464,+!p6@BACH1!1.35!21.31!BACH1;;chr3:187455486..187455504,-!p6@BCL6!1.35!21.31!BCL6;;chr7:28725740..28725778,+!p1@CREB5!1.34!181.15!CREB5;;chr2:70314240..70314256,+!p4@PCBP1!1.34!42.20!PCBP1;;chr12:48298785..48298828,-!p1@VDR!1.33!106.13!VDR;;chr9:110250697..110250738,-!p2@KLF4!1.33!23.87!KLF4;;chr7:150946376..150946389,-!p6@SMARCD3!1.33!20.46!SMARCD3;;chr3:187455529..187455544,-!p5@BCL6!1.33!20.46!BCL6;;chr1:25256439..25256476,-!p3@RUNX3!1.33!20.46!RUNX3;;chr9:110252035..110252057,-!p1@KLF4!1.32!307.31!KLF4;;chr12:72056749..72056767,+!p6@THAP2!1.31!21.31!THAP2;;chr17:38497662..38497713,+!p4@RARA!1.30!22.16!RARA;;chr2:231084820..231084836,-!p5@SP110!1.30!21.74!SP110;;chr4:185395633..185395651,-!p2@IRF2!1.29!29.41!IRF2;;chr2:231084659..231084721,-!p1@SP110!1.28!409.18!SP110;;chr19:45250948..45250998,+!p3@BCL3!1.28!44.75!BCL3;;chr18:3449720..3449749,+!p2@TGIF1!1.28!38.36!TGIF1;;chr2:231280954..231280965,+!p2@SP100!1.27!32.39!SP100;;chr1:221052776..221052799,+!p1@HLX!1.27!31.11!HLX;;chr6:106535598..106535637,+!p7@PRDM1!1.27!17.48!PRDM1;;chr10:31288370..31288393,-!p3@ZNF438!1.26!17.05!ZNF438;;chr12:72056773..72056796,+!p3@THAP2!1.25!21.74!THAP2;;chr2:238600998..238601013,+!p5@LRRFIP1!1.25!16.62!LRRFIP1;;chr13:41593425..41593480,-!p1@ELF1!1.24!103.15!ELF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.24!40.07!NFKBIA;;chr19:13213662..13213686,-!p1@LYL1!1.24!24.29!LYL1;;chr3:187455680..187455700,-!p4@BCL6!1.24!16.20!BCL6;;chr10:31288398..31288455,-!p2@ZNF438!1.22!18.33!ZNF438;;chr12:56415287..56415300,+!p5@IKZF4!1.22!15.77!IKZF4;;chr7:17338266..17338282,+!p1@AHR!1.21!160.26!AHR;;chr19:45252008..45252024,+!p2@BCL3!1.21!50.29!BCL3;;chr4:106068026..106068084,+!p1@TET2!1.20!130.85!TET2;;chr3:39195037..39195069,-!p2@CSRNP1!1.20!90.79!CSRNP1;;chr1:8484007..8484061,-!p13@RERE!1.20!18.75!RERE;;chr6:126240463..126240489,+!p6@NCOA7!1.20!16.62!NCOA7;;chr1:158979922..158979933,+!p13@IFI16!1.20!14.92!IFI16;;chr16:3285119..3285133,-!p2@ZNF200!1.19!28.98!ZNF200;;chr1:221052733..221052749,+!p2@HLX!1.19!18.75!HLX;;chr2:231090433..231090469,+!p1@SP140!1.18!14.07!SP140;;chr6:36355486..36355497,-!p3@ETV7!1.18!14.07!ETV7;;chr19:19496539..19496576,+!p8@GATAD2A!1.17!24.29!GATAD2A;;chr3:187463179..187463201,-!p2@BCL6!1.16!55.41!BCL6;;chr8:116681123..116681143,-!p4@TRPS1!1.16!26.00!TRPS1;;chr16:89787973..89788001,+!p3@ZNF276!1.16!26.00!ZNF276;;chr4:103422499..103422632,+!p1@NFKB1!1.15!269.80!NFKB1;;chr6:15246200..15246214,+!p2@JARID2!1.15!35.80!JARID2;;chr16:79634595..79634620,-!p2@MAF!1.15!23.87!MAF;;chr20:56195474..56195506,-!p1@ZBP1!1.15!13.21!ZBP1;;chr10:35484090..35484104,+!p6@CREM!1.15!13.21!CREM;;chr11:2292226..2292270,-!p1@ASCL2!1.15!13.21!ASCL2;;chr3:107318352..107318392,+!p14@BBX!1.15!13.21!BBX;;chr12:96588279..96588299,+!p4@ELK3!1.14!60.10!ELK3;;chr17:38498402..38498445,+!p3@RARA!1.13!45.18!RARA;;chr14:74226747..74226779,-!p3@C14orf43!1.12!68.62!C14orf43;;chr6:126240380..126240430,+!p2@NCOA7!1.12!31.97!NCOA7;;chr8:71316428..71316459,-!p2@NCOA2!1.12!20.46!NCOA2;;chr20:48807351..48807384,+!p1@CEBPB!1.11!1216.45!CEBPB;;chr22:38597987..38598021,+!p2@MAFF!1.11!73.31!MAFF;;chr3:187455634..187455651,-!p7@BCL6!1.11!11.93!BCL6;;chr19:45251943..45252006,+!p1@BCL3!1.10!303.05!BCL3;;chr9:129567282..129567353,+!p1@ZBTB43!1.10!151.31!ZBTB43;;chr12:96588219..96588263,+!p2@ELK3!1.10!83.97!ELK3;;chr2:145277882..145277967,-!p3@ZEB2!1.10!20.03!ZEB2;;chr21:34442540..34442560,+!p2@OLIG1!1.10!11.51!OLIG1;;chr17:38498594..38498661,+!p2@RARA!1.09!38.36!RARA;;chr7:17338324..17338341,+!p3@AHR!1.09!37.93!AHR;;chr3:12329397..12329433,+!p2@PPARG!1.09!26.00!PPARG;;chr21:36260343..36260402,-!p6@RUNX1!1.09!18.33!RUNX1;;chr6:44233252..44233296,-!p1@NFKBIE!1.08!108.26!NFKBIE;;chr10:104155480..104155534,+!p2@NFKB2!1.08!72.46!NFKB2;;chr19:12721790..12721810,+!p2@ZNF791!1.08!30.26!ZNF791;;chr1:221053049..221053075,+!p3@HLX!1.08!19.18!HLX;;chr2:28618532..28618610,+!p4@FOSL2!1.08!18.75!FOSL2;;chr14:75745523..75745537,+!p1@FOS!1.07!1275.69!FOS;;chr14:74226961..74227020,-!p1@C14orf43!1.07!71.61!C14orf43;;chr2:238600933..238600985,+!p3@LRRFIP1!1.07!58.82!LRRFIP1;;chr12:54785074..54785122,-!p2@ZNF385A!1.07!16.62!ZNF385A;;chrX:153305787..153305807,-!p3@MECP2!1.07!10.66!MECP2;;chr12:56753869..56753930,-!p1@STAT2!1.05!451.37!STAT2;;chr3:170075436..170075520,+!p1@SKIL!1.05!223.34!SKIL;;chr10:3827371..3827386,-!p2@KLF6!1.05!87.80!KLF6;;chr18:3449618..3449634,+!p13@TGIF1!1.05!12.79!TGIF1;;chr21:34398234..34398250,+!p1@OLIG2!1.05!10.23!OLIG2;;chr12:96588368..96588394,+!p3@ELK3!1.04!27.28!ELK3;;chr9:3525727..3525828,-!p2@RFX3!1.04!26.00!RFX3;;chr4:185395191..185395226,-!p4@IRF2!1.04!14.07!IRF2;;chr19:45254529..45254561,+!p10@BCL3!1.04!13.64!BCL3;;chr14:35873947..35873965,-!p1@NFKBIA!1.03!618.03!NFKBIA;;chr14:24630465..24630531,+!p1@IRF9!1.03!373.37!IRF9;;chr3:107318229..107318239,+!p17@BBX!1.03!9.80!BBX;;chr1:158979792..158979814,+!p2@IFI16!1.02!92.06!IFI16;;chr10:104154246..104154347,+!p3@NFKB2!1.02!59.25!NFKB2;;chr1:158979851..158979865,+!p5@IFI16!1.02!21.31!IFI16;;chr12:54785054..54785072,-!p4@ZNF385A!1.02!10.66!ZNF385A;;chr20:48599506..48599526,+!p1@SNAI1!1.01!60.52!SNAI1;;chr12:124873852..124873881,-!p3@NCOR2!1.01!56.26!NCOR2;;chr2:157189180..157189290,-!p1@NR4A2!1.01!49.02!NR4A2;;chr3:37217736..37217753,-!p2@LRRFIP2!1.01!39.21!LRRFIP2;;chr10:35484804..35484902,+!p2@CREM!1.01!36.23!CREM;;chr2:185463247..185463263,+!p1@ZNF804A!1.01!16.62!ZNF804A;;chr12:11802932..11802949,+!p3@ETV6!1.01!16.20!ETV6;;chr7:150974206..150974255,-!p1@SMARCD3!0.99!56.69!SMARCD3;;chr19:42636586..42636607,-!p1@POU2F2!0.99!24.72!POU2F2;;chr5:142782823..142782854,-!p3@NR3C1!0.99!12.79!NR3C1;;chr21:36260980..36261011,-!p1@RUNX1!0.98!252.75!RUNX1;;chrX:106960285..106960299,-!p1@TSC22D3!0.98!236.55!TSC22D3;;chr5:172483347..172483407,+!p1@C5orf41!0.98!65.64!CREBRF;;chr8:116681150..116681164,-!p5@TRPS1!0.98!17.05!TRPS1;;chr2:70167296..70167306,+!p3@MXD1!0.98!13.21!MXD1;;chr2:191885737..191885750,-!p4@STAT1!0.98!8.52!STAT1;;chr7:50343634..50343717,+!p2@IKZF1!0.98!8.52!IKZF1;;chr1:158985686..158985719,+!p15@IFI16!0.98!8.52!IFI16;;chr21:36260325..36260341,-!p14@RUNX1!0.98!8.52!RUNX1;;chr8:116681194..116681214,-!p1@TRPS1!0.97!79.70!TRPS1;;chr2:70142189..70142223,+!p2@MXD1!0.97!61.38!MXD1;;chr2:61108695..61108753,+!p1@REL!0.97!58.82!REL;;chr14:35872962..35873025,-!p3@NFKBIA!0.97!21.31!NFKBIA;;chr7:99156393..99156433,+!p6@ZNF655!0.97!19.18!ZNF655;;chr20:47894569..47894799,-!p1@ZNFX1!0.96!222.06!ZNFX1;;chr7:139762641..139762768,-!p1@PARP12!0.96!113.80!PARP12;;chr4:26322267..26322334,+!p3@RBPJ!0.96!20.03!RBPJ;;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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
 |ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
 |fonse_cell_line=

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FF:11881-125C9: Difference between revisions

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Revision as of 15:45, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0