FF:11319-117D5: Difference between revisions

Revision as of 16:04, 29 June 2012

Name:	Fibroblast - Periodontal Ligament, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	periodontal ligament
dev stage	fetus
sex	unknown
age	fetal
cell type	fibroblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1847
catalog number	SC2635
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0438
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.638
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0512
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.016
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0536
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0435
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0512
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.301
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0715
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.633
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0149
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0512
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.589
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.166
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0512
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.097
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0512
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.138
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.176
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.301
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11962

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00463
MA0003.1	MA0003.1	0.0837
MA0004.1	MA0004.1	0.351
MA0006.1	MA0006.1	0.951
MA0007.1	MA0007.1	0.989
MA0009.1	MA0009.1	0.373
MA0014.1	MA0014.1	0.621
MA0017.1	MA0017.1	0.0136
MA0018.2	MA0018.2	0.0804
MA0019.1	MA0019.1	0.251
MA0024.1	MA0024.1	2.45503e-10
MA0025.1	MA0025.1	0.0158
MA0027.1	MA0027.1	0.647
MA0028.1	MA0028.1	0.184
MA0029.1	MA0029.1	0.416
MA0030.1	MA0030.1	0.431
MA0031.1	MA0031.1	0.148
MA0035.2	MA0035.2	0.0134
MA0038.1	MA0038.1	2.69393e-4
MA0039.2	MA0039.2	0.95
MA0040.1	MA0040.1	0.521
MA0041.1	MA0041.1	0.24
MA0042.1	MA0042.1	0.541
MA0043.1	MA0043.1	0.00978
MA0046.1	MA0046.1	0.891
MA0047.2	MA0047.2	0.534
MA0048.1	MA0048.1	6.31088e-4
MA0050.1	MA0050.1	2.72588e-5
MA0051.1	MA0051.1	3.95241e-4
MA0052.1	MA0052.1	0.626
MA0055.1	MA0055.1	0.0107
MA0057.1	MA0057.1	0.906
MA0058.1	MA0058.1	0.147
MA0059.1	MA0059.1	0.259
MA0060.1	MA0060.1	8.12898e-13
MA0061.1	MA0061.1	2.21921e-4
MA0062.2	MA0062.2	0.39
MA0065.2	MA0065.2	0.0116
MA0066.1	MA0066.1	0.623
MA0067.1	MA0067.1	0.0229
MA0068.1	MA0068.1	0.138
MA0069.1	MA0069.1	0.267
MA0070.1	MA0070.1	0.197
MA0071.1	MA0071.1	0.738
MA0072.1	MA0072.1	0.737
MA0073.1	MA0073.1	0.493
MA0074.1	MA0074.1	0.77
MA0076.1	MA0076.1	0.253
MA0077.1	MA0077.1	0.526
MA0078.1	MA0078.1	0.867
MA0079.2	MA0079.2	0.723
MA0080.2	MA0080.2	1.36476e-12
MA0081.1	MA0081.1	0.0812
MA0083.1	MA0083.1	0.24
MA0084.1	MA0084.1	0.0465
MA0087.1	MA0087.1	0.984
MA0088.1	MA0088.1	0.0533
MA0090.1	MA0090.1	0.589
MA0091.1	MA0091.1	0.427
MA0092.1	MA0092.1	0.111
MA0093.1	MA0093.1	0.34
MA0099.2	MA0099.2	0.102
MA0100.1	MA0100.1	0.0706
MA0101.1	MA0101.1	0.0114
MA0102.2	MA0102.2	0.00747
MA0103.1	MA0103.1	7.40948e-4
MA0104.2	MA0104.2	0.567
MA0105.1	MA0105.1	6.66588e-5
MA0106.1	MA0106.1	0.875
MA0107.1	MA0107.1	2.92615e-4
MA0108.2	MA0108.2	0.163
MA0111.1	MA0111.1	0.732
MA0112.2	MA0112.2	0.00103
MA0113.1	MA0113.1	0.71
MA0114.1	MA0114.1	0.0571
MA0115.1	MA0115.1	0.905
MA0116.1	MA0116.1	0.00808
MA0117.1	MA0117.1	0.445
MA0119.1	MA0119.1	0.957
MA0122.1	MA0122.1	0.377
MA0124.1	MA0124.1	0.435
MA0125.1	MA0125.1	0.37
MA0131.1	MA0131.1	0.363
MA0135.1	MA0135.1	0.358
MA0136.1	MA0136.1	3.20723e-11
MA0137.2	MA0137.2	0.21
MA0138.2	MA0138.2	0.382
MA0139.1	MA0139.1	0.156
MA0140.1	MA0140.1	0.247
MA0141.1	MA0141.1	0.501
MA0142.1	MA0142.1	0.42
MA0143.1	MA0143.1	0.301
MA0144.1	MA0144.1	0.103
MA0145.1	MA0145.1	0.114
MA0146.1	MA0146.1	0.987
MA0147.1	MA0147.1	0.662
MA0148.1	MA0148.1	0.243
MA0149.1	MA0149.1	0.899
MA0150.1	MA0150.1	0.0137
MA0152.1	MA0152.1	0.0316
MA0153.1	MA0153.1	0.143
MA0154.1	MA0154.1	0.0019
MA0155.1	MA0155.1	0.187
MA0156.1	MA0156.1	8.10281e-5
MA0157.1	MA0157.1	0.113
MA0159.1	MA0159.1	6.86847e-4
MA0160.1	MA0160.1	0.148
MA0162.1	MA0162.1	0.837
MA0163.1	MA0163.1	0.042
MA0164.1	MA0164.1	0.605
MA0258.1	MA0258.1	0.0173
MA0259.1	MA0259.1	0.814

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11962

Novel motif	Logo	P-value
1	1	0.263
10	10	0.988
100	100	0.839
101	101	0.542
102	102	0.936
103	103	0.0786
104	104	0.843
105	105	0.464
106	106	0.00116
107	107	0.286
108	108	0.481
109	109	0.373
11	11	0.454
110	110	0.577
111	111	0.683
112	112	0.0446
113	113	0.102
114	114	0.0407
115	115	0.707
116	116	0.791
117	117	0.814
118	118	0.643
119	119	0.2
12	12	0.968
120	120	0.3
121	121	0.832
122	122	0.0603
123	123	0.0525
124	124	0.425
125	125	0.771
126	126	0.695
127	127	0.519
128	128	0.106
129	129	0.208
13	13	0.486
130	130	0.0135
131	131	0.226
132	132	0.883
133	133	0.313
134	134	0.306
135	135	0.00135
136	136	0.464
137	137	0.199
138	138	0.116
139	139	5.99888e-5
14	14	0.163
140	140	0.943
141	141	0.535
142	142	0.963
143	143	0.0717
144	144	0.666
145	145	0.936
146	146	0.881
147	147	0.72
148	148	0.114
149	149	0.254
15	15	0.181
150	150	0.784
151	151	0.179
152	152	0.0471
153	153	0.877
154	154	0.979
155	155	0.188
156	156	0.589
157	157	0.101
158	158	0.0204
159	159	0.188
16	16	0.615
160	160	0.744
161	161	0.571
162	162	0.206
163	163	0.802
164	164	0.593
165	165	0.275
166	166	0.993
167	167	0.26
168	168	0.287
169	169	0.0421
17	17	0.22
18	18	0.567
19	19	0.992
2	2	0.66
20	20	0.578
21	21	0.298
22	22	0.597
23	23	0.0545
24	24	0.954
25	25	0.336
26	26	0.756
27	27	0.247
28	28	0.476
29	29	0.57
3	3	0.355
30	30	0.933
31	31	0.497
32	32	0.96
33	33	0.921
34	34	0.444
35	35	0.245
36	36	0.0882
37	37	0.132
38	38	0.402
39	39	0.794
4	4	0.457
40	40	0.172
41	41	0.0452
42	42	0.732
43	43	0.22
44	44	0.38
45	45	0.274
46	46	0.382
47	47	0.43
48	48	0.59
49	49	0.19
5	5	0.1
50	50	0.546
51	51	0.552
52	52	0.184
53	53	0.361
54	54	0.728
55	55	0.934
56	56	0.888
57	57	0.785
58	58	0.0491
59	59	0.471
6	6	0.932
60	60	0.00905
61	61	0.678
62	62	0.0486
63	63	0.735
64	64	0.514
65	65	0.13
66	66	0.0884
67	67	0.519
68	68	0.54
69	69	0.478
7	7	0.155
70	70	0.0308
71	71	0.233
72	72	0.249
73	73	0.11
74	74	0.957
75	75	0.244
76	76	0.766
77	77	0.329
78	78	0.631
79	79	0.842
8	8	0.512
80	80	0.00708
81	81	0.415
82	82	0.00592
83	83	0.381
84	84	0.937
85	85	0.00226
86	86	0.285
87	87	0.339
88	88	0.461
89	89	0.0601
9	9	0.461
90	90	0.279
91	91	0.866
92	92	0.105
93	93	0.752
94	94	0.311
95	95	0.347
96	96	0.284
97	97	0.966
98	98	0.102
99	99	0.0264

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11962

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000067 human fibroblast of periodontium sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002556 (fibroblast of periodontium)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002100 (trunk)
0002384 (connective tissue)
0000033 (head)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0000077 (mixed endoderm/mesoderm-derived structure)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0004765 (skeletal element)
0004120 (mesoderm-derived structure)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0003102 (surface structure)
0000078 (mixed ectoderm/mesoderm/endoderm-derived structure)
0000075 (subdivision of skeletal system)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0000925 (endoderm)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0001555 (digestive tract)
0001758 (periodontium)
0002329 (somite)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0000924 (ectoderm)
0000165 (mouth)
0007026 (primitive gut)
0003129 (skull)
0003672 (dentition)
0003077 (paraxial mesoderm)
0009142 (entire embryonic mesenchyme)
0004288 (skeleton)
0000930 (stomodeum)
0006601 (presumptive ectoderm)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0003089 (sclerotome)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr6:34204921..34204939,+!p3@HMGA1!2.02!2932.78!HMGA1;;chr1:170632285..170632309,+!p1@PRRX1!1.87!82.70!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!1.83!170.41!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!1.76!75.82!PRRX1;;chr14:37131058..37131139,+!p1@PAX9!1.74!53.43!PAX9;;chr14:61116183..61116208,-!p1@SIX1!1.73!192.18!SIX1;;chr16:86544113..86544145,+!p1@FOXF1!1.68!57.18!FOXF1;;chr4:174451370..174451387,-!p1@HAND2!1.67!45.42!HAND2;;chr6:1389789..1389821,+!p1@FOXF2!1.60!52.30!FOXF2;;chr12:66218212..66218244,+!p5@HMGA2!1.57!52.05!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!1.55!154.65!HMGA2;;chr15:57511609..57511651,+!p2@TCF12!1.51!51.55!TCF12;;chr12:66218183..66218209,+!p4@HMGA2!1.50!57.55!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!1.46!74.95!TWIST1;;chr4:4861385..4861398,+!p1@MSX1!1.40!70.44!MSX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.34!26.65!TFAP2C;;chr16:86600426..86600441,+!p1@FOXC2!1.32!48.92!FOXC2;;chr2:200322654..200322707,-!p2@SATB2!1.32!29.03!SATB2;;chr1:170633262..170633285,+!p3@PRRX1!1.29!20.89!PRRX1;;chr2:223163706..223163730,-!p1@PAX3!1.26!17.27!PAX3;;chr17:59477233..59477263,+!p1@TBX2!1.24!49.67!TBX2;;chr12:115122318..115122331,-!p2@TBX3!1.24!16.52!TBX3;;chr2:239756671..239756732,+!p1@TWIST2!1.23!50.42!TWIST2;;chr2:45236540..45236577,-!p1@SIX2!1.21!15.26!SIX2;;chr14:37126765..37126799,+!p2@PAX9!1.20!15.01!PAX9;;chr11:65667884..65667895,-!p2@FOSL1!1.17!53.68!FOSL1;;chr10:28034739..28034756,-!p1@MKX!1.16!13.51!MKX;;chr9:96717629..96717644,-!p1@BARX1!1.15!13.26!BARX1;;chr2:102091566..102091581,-!p1@RFX8!1.15!13.14!RFX8;;chr12:66218573..66218596,+!p7@HMGA2!1.08!16.39!HMGA2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.07!11.51!GLIS1;;chr19:46801639..46801699,+!p1@HIF3A!1.07!10.64!HIF3A;;chr1:170632250..170632277,+!p7@PRRX1!1.06!10.51!PRRX1;;chr2:5832508..5832524,+!p1@SOX11!1.06!10.51!SOX11;;chr20:42543441..42543497,+!p1@TOX2!1.05!46.17!TOX2;;chr1:170632477..170632506,+!p6@PRRX1!1.05!10.13!PRRX1;;chr9:132427883..132427951,+!p2@PRRX2!1.05!10.13!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.04!13.26!PRRX2;;chr6:10412600..10412637,-!p1@TFAP2A!1.02!16.14!TFAP2A;;chr12:85673977..85674015,+!p1@ALX1!1.01!9.13!ALX1;;chr15:83953397..83953425,-!p1@BNC1!1.00!10.26!BNC1;;chr6:1389824..1389840,+!p3@FOXF2!1.00!9.01!FOXF2;;chr2:239756739..239756755,+!p2@TWIST2!0.99!15.14!TWIST2;;chr12:66218378..66218401,+!p6@HMGA2!0.98!13.39!HMGA2;;chr14:61116168..61116180,-!p2@SIX1!0.98!9.76!SIX1;;chr12:66218420..66218439,+!p12@HMGA2!0.98!8.51!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!0.97!23.15!OSR1;;chr12:66218443..66218461,+!p8@HMGA2!0.97!10.89!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.95!13.64!CREB3L1;;chr17:41622765..41622821,-!p2@ETV4!0.95!12.14!ETV4;;chr12:115122303..115122314,-!p6@TBX3!0.95!8.01!TBX3;;chr1:170632439..170632465,+!p11@PRRX1!0.95!7.88!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!0.94!8.38!HMGA2;;chr7:14029283..14029311,-!p1@ETV1!0.93!41.29!ETV1;;chr11:65686732..65686756,+!p2@DRAP1!0.92!32.28!DRAP1;;chr6:10415276..10415341,-!p2@TFAP2A!0.92!9.13!TFAP2A;;chr4:174450089..174450153,-!p2@HAND2!0.92!7.26!HAND2;;chr4:299227..299272,-!p1@ZNF732!0.91!7.13!ZNF732;;chr11:46299199..46299233,+!p1@CREB3L1!0.90!37.16!CREB3L1;;chr11:65667846..65667868,-!p1@FOSL1!0.89!188.30!FOSL1;;chr5:321810..321877,+!p1@AHRR!0.89!22.40!AHRR;;chr17:59477197..59477212,+!p2@TBX2!0.89!11.89!TBX2;;chr17:41623009..41623053,-!p4@ETV4!0.89!11.26!ETV4;;chr8:60031682..60031710,-!p2@TOX!0.89!11.14!TOX;;chr20:42543506..42543549,+!p2@TOX2!0.88!16.52!TOX2;;chr2:200323414..200323455,-!p1@SATB2!0.88!14.76!SATB2;;chr12:2986206..2986258,-!p2@FOXM1!0.87!41.16!FOXM1;;chr11:65686802..65686818,+!p6@DRAP1!0.86!11.14!DRAP1;;chr6:45296048..45296082,+!p1@RUNX2!0.86!7.26!RUNX2;;chr1:170632137..170632172,+!p10@PRRX1!0.86!6.26!PRRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.85!65.44!FOXM1;;chr5:176738887..176738934,-!p1@MXD3!0.84!41.91!MXD3;;chr17:41623692..41623715,-!p1@ETV4!0.84!27.15!ETV4;;chr1:170632310..170632321,+!p15@PRRX1!0.84!5.88!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.84!5.88!PRRX1;;chr17:41277372..41277418,-!p1@BRCA1!0.83!22.40!BRCA1;;chr4:26322267..26322334,+!p3@RBPJ!0.83!14.51!RBPJ;;chr17:59477275..59477286,+!p3@TBX2!0.83!7.88!TBX2;;chr14:37126814..37126834,+!p4@PAX9!0.83!5.76!PAX9;;chr6:34204973..34204990,+!p4@HMGA1!0.82!80.08!HMGA1;;chr1:170632115..170632136,+!p9@PRRX1!0.82!5.63!PRRX1;;chr5:134369905..134369972,-!p1@PITX1!0.81!8.63!PITX1;;chr9:77112244..77112262,+!p1@RORB!0.81!6.13!RORB;;chr6:34204672..34204692,+!p1@HMGA1!0.80!643.99!HMGA1;;chr8:60031619..60031676,-!p1@TOX!0.80!12.14!TOX;;chr7:96654133..96654150,-!p1@DLX5!0.80!5.38!DLX5;;chr8:93074803..93074845,-!p1@RUNX1T1!0.80!5.38!RUNX1T1;;chr4:174451350..174451363,-!p3@HAND2!0.80!5.38!HAND2;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.89!TWIST1;;chr16:86600870..86600921,+!p2@FOXC2!0.79!5.13!FOXC2;;chr12:66218836..66218888,+!p1@HMGA2!0.78!51.42!HMGA2;;chr15:57511589..57511608,+!p4@TCF12!0.78!5.00!TCF12;;chr7:44143925..44143970,+!p1@AEBP1!0.77!120.24!AEBP1;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0.17!13.64!SMARCAD1;;chr1:53019059..53019176,-!p2@ZCCHC11!0.17!11.26!ZCCHC11;;chrX:128657413..128657456,-!p2@SMARCA1!0.17!11.01!SMARCA1;;chr19:20278012..20278034,+!p1@ZNF486!0.17!10.64!ZNF486;;chr1:164528410..164528428,+!p1@PBX1!0.17!9.26!PBX1;;chr20:3388238..3388323,-!p1@C20orf194!0.17!8.76!C20orf194;;chr4:146859927..146860055,-!p1@ZNF827!0.17!7.38!ZNF827;;chr6:28317685..28317761,+!p1@ZKSCAN3!0.17!6.01!ZKSCAN3;;chr14:89029336..89029363,+!p2@ZC3H14!0.17!4.63!ZC3H14;;chr3:150126416..150126437,+!p3@TSC22D2!0.17!4.13!TSC22D2;;chr3:52719546..52719636,-!p3@PBRM1!0.17!4.00!PBRM1;;chr12:46123050..46123129,+!p2@ARID2!0.17!3.38!ARID2;;chr19:53193790..53193821,-!p3@ZNF83!0.17!3.25!ZNF83;;chr22:41697497..41697515,+!p2@ZC3H7B!0.17!2.88!ZC3H7B;;chr12:19671171..19671175,+!p4@AEBP2!0.17!2.25!AEBP2;;chr13:74708475..74708499,-!p5@KLF12!0.17!2.25!KLF12;;chr12:56401268..56401305,+!p1@IKZF4!0.17!2.00!IKZF4;;chrX:134478026..134478052,-!p2@ZNF75D!0.17!2.00!ZNF75D;;chr16:4322948..4322975,-!p3@TFAP4!0.17!1.88!TFAP4;;chr9:128509635..128509658,+!p2@PBX3!0.17!1.75!PBX3;;chr4:56413067..56413086,-!p4@CLOCK!0.17!1.50!CLOCK;;chr12:6798523..6798548,-!p6@ZNF384!0.17!1.50!ZNF384;;chr19:47922750..47922795,-!p1@MEIS3!0.17!1.38!MEIS3;;chr15:31619871..31619884,+!p8@KLF13!0.17!1.38!KLF13;;chr15:57211660..57211687,+!p6@TCF12!0.17!1.38!TCF12;;chr16:29818199..29818216,+!p11@MAZ!0.17!1.38!MAZ;;chr19:57078854..57078889,+!p1@ZNF470!0.17!1.25!ZNF470;;chr1:247242107..247242120,-!p2@ZNF670!0.17!1.25!ZNF670;;chrX:131623982..131624011,-!p6@MBNL3!0.17!1.13!MBNL3;;chr19:50431999..50432026,+!p4@ATF5!0.17!1.00!ATF5;;chr1:158979680..158979683,+!p9@IFI16!0.17!1.00!IFI16;;chr14:89878529..89878559,-!p5@FOXN3!0.17!1.00!FOXN3;;chr17:41277479..41277510,-!p5@BRCA1!0.17!1.00!BRCA1;;chr19:20011731..20011743,+!p3@ZNF93!0.17!0.88!ZNF93;;chr6:45390599..45390662,+!p11@RUNX2!0.17!0.75!RUNX2;;chr7:100076873..100076880,-!p6@TSC22D4!0.17!0.75!TSC22D4;;chr12:104532062..104532071,-!p6@NFYB!0.17!0.75!NFYB;;chr1:41204530..41204541,+!p8@NFYC!0.17!0.75!NFYC;;chr3:141121369..141121392,+!p14@ZBTB38!0.17!0.75!ZBTB38;;chr3:71179785..71179810,-!p23@FOXP1!0.17!0.63!FOXP1;;chr20:49547910..49547988,-!p1@ADNP!0.16!48.42!ADNP;;chr14:75894714..75894733,+!p1@JDP2!0.16!36.91!JDP2;;chr12:69753448..69753577,+!p1@YEATS4!0.16!25.52!YEATS4;;chr10:96122682..96122730,-!p1@NOC3L!0.16!18.52!NOC3L;;chr12:104531945..104531996,-!p1@NFYB!0.16!17.39!NFYB;;chrX:24167828..24167890,+!p1@ZFX!0.16!13.64!ZFX;;chr4:124374..124410,+!p2@ZNF718!0.16!13.01!ZNF718;;chr3:44666519..44666542,+!p1@ZNF197!0.16!11.64!ZNF197;;chr8:116681194..116681214,-!p1@TRPS1!0.16!11.39!TRPS1;;chr19:53193731..53193767,-!p1@ZNF83!0.16!11.14!ZNF83;;chr4:10459009..10459061,-!p1@ZNF518B!0.16!11.01!ZNF518B;;chr10:21823128..21823216,+!p1@MLLT10!0.16!11.01!MLLT10;;chr9:94186131..94186174,-!p2@NFIL3!0.16!10.01!NFIL3;;chr14:62162285..62162296,+!p3@HIF1A!0.16!6.01!HIF1A;;chr3:129158854..129158883,-!p3@MBD4!0.16!5.76!MBD4;;chr19:15543565..15543579,-!p2@WIZ!0.16!5.00!WIZ;;chr11:129872712..129872755,-!p1@PRDM10!0.16!4.75!PRDM10;;chr10:35484804..35484902,+!p2@CREM!0.16!4.25!CREM;;chr19:11959532..11959593,+!p1@ZNF439!0.16!4.25!ZNF439;;chr19:11071652..11071682,+!p3@SMARCA4!0.16!3.75!SMARCA4;;chr1:164528384..164528409,+!p3@PBX1!0.16!3.25!PBX1;;chrX:129402768..129402796,-!p2@ZNF280C!0.16!3.25!ZNF280C;;chr16:29817231..29817290,+!p10@MAZ!0.16!3.00!MAZ;;chr19:56111639..56111668,+!p2@ZNF524!0.16!2.88!ZNF524;;

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FF:11319-117D5: Difference between revisions

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Revision as of 16:04, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0