FFCP PHASE1:Hg19::chr3:50192499..50192534,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.59e-31!254;CL:0002321!2.03e-18!248;CL:0000220!5.35e-18!246;CL:0000076!5.39e-13!62;CL:0002078!1.67e-12!44;CL:0002139!2.64e-12!24;CL:0000115!3.57e-12!35;CL:0000071!1.17e-10!18;CL:0002546!1.17e-10!18;CL:0002076!6.06e-10!43;CL:0000213!6.89e-10!57;CL:0000215!6.89e-10!57;CL:0000223!1.35e-08!59;CL:1000449!2.15e-08!16;CL:0002159!7.32e-08!13;CL:0000222!1.54e-07!119;CL:1000497!1.60e-07!18;CL:0002518!1.60e-07!18;CL:0002681!5.08e-07!13;CL:0002584!5.08e-07!13;CL:1000413!7.03e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.59e-31!254;CL:0002321!2.03e-18!248;CL:0000220!5.35e-18!246;CL:0000076!5.39e-13!62;CL:0002078!1.67e-12!44;CL:0002139!2.64e-12!24;CL:0000115!3.57e-12!35;CL:0000071!1.17e-10!18;CL:0002546!1.17e-10!18;CL:0002076!6.06e-10!43;CL:0000213!6.89e-10!57;CL:0000215!6.89e-10!57;CL:0000223!1.35e-08!59;CL:1000449!2.15e-08!16;CL:0002159!7.32e-08!13;CL:0000222!1.54e-07!119;CL:1000497!1.60e-07!18;CL:0002518!1.60e-07!18;CL:0002681!5.08e-07!13;CL:0002584!5.08e-07!13;CL:1000413!7.03e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.83e-12;24!CL:0000115;2.83e-11;36!CL:0000071;8.32e-11;18!CL:0002078;3.15e-09;45!CL:1000449;3.53e-08;15!CL:0002159;4.36e-08;14!CL:0002076;5.00e-08;42!CL:0000076;1.04e-07;63!CL:0000213;1.86e-07;58!CL:0000215;1.86e-07;58!CL:1000497;2.13e-07;17!CL:0002518;2.13e-07;17!CL:1000413;5.50e-07;9!CL:0002681;8.85e-07;12!CL:0002584;8.85e-07;12 | |ontology_enrichment_celltype_v019=CL:0002139;1.83e-12;24!CL:0000115;2.83e-11;36!CL:0000071;8.32e-11;18!CL:0002078;3.15e-09;45!CL:1000449;3.53e-08;15!CL:0002159;4.36e-08;14!CL:0002076;5.00e-08;42!CL:0000076;1.04e-07;63!CL:0000213;1.86e-07;58!CL:0000215;1.86e-07;58!CL:1000497;2.13e-07;17!CL:0002518;2.13e-07;17!CL:1000413;5.50e-07;9!CL:0002681;8.85e-07;12!CL:0002584;8.85e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-31,253;CL:0002321,3.82e-19,250;CL:0002078,1.92e-13,45;CL:0000115,2.73e-13,36;CL:0000076,2.73e-13,63;CL:0002139,1.72e-12,24;CL:0000071,8.12e-11,18;CL:0002546,8.12e-11,18;CL:0000213,9.84e-11,58;CL:0000215,9.84e-11,58;CL:0002076,5.70e-10,42;CL:0000223,1.80e-08,58;CL:1000449,3.78e-08,15;CL:0002159,4.11e-08,14;CL:0000222,4.54e-08,121;CL:1000497,2.24e-07,17;CL:0002518,2.24e-07,17;CL:1000413,5.68e-07,9;CL:0002681,9.44e-07,12;CL:0002584,9.44e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;8.32e-11;18 | |ontology_enrichment_development_v019=CL:0002546;8.32e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.49e-28!659;UBERON:0000483!5.64e-25!309;UBERON:0000477!2.31e-24!286;UBERON:0000119!2.36e-24!312;UBERON:0000467!2.27e-23!625;UBERON:0000480!4.03e-23!626;UBERON:0000922!3.90e-22!612;UBERON:0000481!1.45e-21!347;UBERON:0002050!1.12e-19!605;UBERON:0005423!1.12e-19!605;UBERON:0004111!1.76e-19!241;UBERON:0000923!2.17e-19!604;UBERON:0005291!2.17e-19!604;UBERON:0006598!2.17e-19!604;UBERON:0002532!2.17e-19!604;UBERON:0000475!8.99e-18!365;UBERON:0000025!3.34e-14!194;UBERON:0003914!9.99e-14!118;UBERON:0000062!5.09e-13!511;UBERON:0000064!6.42e-13!219;UBERON:0001444!6.34e-12!48;UBERON:0003103!1.43e-11!69;UBERON:0009569!1.78e-11!113;UBERON:0002049!5.06e-11!79;UBERON:0007798!5.06e-11!79;UBERON:0004119!6.80e-11!169;UBERON:0000925!6.80e-11!169;UBERON:0006595!6.80e-11!169;UBERON:0001986!1.17e-10!18;UBERON:0004638!1.17e-10!18;UBERON:0004852!1.17e-10!18;UBERON:0001004!2.22e-10!72;UBERON:0004872!4.07e-10!84;UBERON:0005177!6.16e-10!107;UBERON:0003104!1.87e-09!238;UBERON:0009142!1.87e-09!238;UBERON:0000055!2.53e-09!69;UBERON:0001048!3.24e-09!168;UBERON:0004121!4.15e-09!169;UBERON:0000080!5.66e-09!18;UBERON:0002120!5.66e-09!18;UBERON:0004875!5.66e-09!18;UBERON:0005721!5.66e-09!18;UBERON:0005754!5.66e-09!18;UBERON:0007297!5.66e-09!18;UBERON:0003887!6.14e-09!21;UBERON:0000924!7.41e-09!173;UBERON:0006601!7.41e-09!173;UBERON:0000033!8.52e-09!123;UBERON:0001981!1.07e-08!60;UBERON:0007500!1.07e-08!60;UBERON:0004537!1.07e-08!60;UBERON:0006965!1.07e-08!60;UBERON:0006555!1.36e-08!17;UBERON:0005103!1.36e-08!17;UBERON:0000083!1.36e-08!17;UBERON:0009201!1.36e-08!17;UBERON:0004819!1.36e-08!17;UBERON:0006553!1.36e-08!17;UBERON:0003074!1.36e-08!17;UBERON:0003060!1.36e-08!17;UBERON:0005085!1.58e-08!29;UBERON:0000153!1.82e-08!129;UBERON:0007811!1.82e-08!129;UBERON:0004211!2.15e-08!16;UBERON:0001285!2.15e-08!16;UBERON:0007684!2.15e-08!16;UBERON:0003220!2.15e-08!16;UBERON:0004208!2.15e-08!16;UBERON:0006914!2.57e-08!25;UBERON:0000020!5.23e-08!23;UBERON:0002113!5.49e-08!27;UBERON:0003918!5.49e-08!27;UBERON:0005095!5.49e-08!27;UBERON:0007687!5.49e-08!27;UBERON:0004876!5.96e-08!20;UBERON:0000970!7.01e-08!20;UBERON:0001008!9.10e-08!45;UBERON:0000487!1.09e-07!22;UBERON:0001032!1.33e-07!24;UBERON:0004456!1.33e-07!24;UBERON:0006554!1.37e-07!44;UBERON:0001456!1.67e-07!21;UBERON:0002100!1.90e-07!216;UBERON:0002104!1.95e-07!21;UBERON:0000019!2.16e-07!19;UBERON:0000047!2.16e-07!19;UBERON:0004088!2.16e-07!19;UBERON:0003072!2.16e-07!19;UBERON:0003071!2.16e-07!19;UBERON:0004128!2.16e-07!19;UBERON:0005172!2.45e-07!55;UBERON:0005173!2.45e-07!55;UBERON:0001007!2.94e-07!155;UBERON:0001555!2.94e-07!155;UBERON:0007026!2.94e-07!155;UBERON:0000915!3.54e-07!52;UBERON:0000353!4.68e-07!17;UBERON:0001225!5.08e-07!13;UBERON:0008987!5.08e-07!13;UBERON:0000489!5.51e-07!32;UBERON:0000063!5.56e-07!97;UBERON:0003915!7.03e-07!9;UBERON:0004700!7.03e-07!9;UBERON:0001917!7.03e-07!9 | |ontology_enrichment_uberon=UBERON:0000468!2.49e-28!659;UBERON:0000483!5.64e-25!309;UBERON:0000477!2.31e-24!286;UBERON:0000119!2.36e-24!312;UBERON:0000467!2.27e-23!625;UBERON:0000480!4.03e-23!626;UBERON:0000922!3.90e-22!612;UBERON:0000481!1.45e-21!347;UBERON:0002050!1.12e-19!605;UBERON:0005423!1.12e-19!605;UBERON:0004111!1.76e-19!241;UBERON:0000923!2.17e-19!604;UBERON:0005291!2.17e-19!604;UBERON:0006598!2.17e-19!604;UBERON:0002532!2.17e-19!604;UBERON:0000475!8.99e-18!365;UBERON:0000025!3.34e-14!194;UBERON:0003914!9.99e-14!118;UBERON:0000062!5.09e-13!511;UBERON:0000064!6.42e-13!219;UBERON:0001444!6.34e-12!48;UBERON:0003103!1.43e-11!69;UBERON:0009569!1.78e-11!113;UBERON:0002049!5.06e-11!79;UBERON:0007798!5.06e-11!79;UBERON:0004119!6.80e-11!169;UBERON:0000925!6.80e-11!169;UBERON:0006595!6.80e-11!169;UBERON:0001986!1.17e-10!18;UBERON:0004638!1.17e-10!18;UBERON:0004852!1.17e-10!18;UBERON:0001004!2.22e-10!72;UBERON:0004872!4.07e-10!84;UBERON:0005177!6.16e-10!107;UBERON:0003104!1.87e-09!238;UBERON:0009142!1.87e-09!238;UBERON:0000055!2.53e-09!69;UBERON:0001048!3.24e-09!168;UBERON:0004121!4.15e-09!169;UBERON:0000080!5.66e-09!18;UBERON:0002120!5.66e-09!18;UBERON:0004875!5.66e-09!18;UBERON:0005721!5.66e-09!18;UBERON:0005754!5.66e-09!18;UBERON:0007297!5.66e-09!18;UBERON:0003887!6.14e-09!21;UBERON:0000924!7.41e-09!173;UBERON:0006601!7.41e-09!173;UBERON:0000033!8.52e-09!123;UBERON:0001981!1.07e-08!60;UBERON:0007500!1.07e-08!60;UBERON:0004537!1.07e-08!60;UBERON:0006965!1.07e-08!60;UBERON:0006555!1.36e-08!17;UBERON:0005103!1.36e-08!17;UBERON:0000083!1.36e-08!17;UBERON:0009201!1.36e-08!17;UBERON:0004819!1.36e-08!17;UBERON:0006553!1.36e-08!17;UBERON:0003074!1.36e-08!17;UBERON:0003060!1.36e-08!17;UBERON:0005085!1.58e-08!29;UBERON:0000153!1.82e-08!129;UBERON:0007811!1.82e-08!129;UBERON:0004211!2.15e-08!16;UBERON:0001285!2.15e-08!16;UBERON:0007684!2.15e-08!16;UBERON:0003220!2.15e-08!16;UBERON:0004208!2.15e-08!16;UBERON:0006914!2.57e-08!25;UBERON:0000020!5.23e-08!23;UBERON:0002113!5.49e-08!27;UBERON:0003918!5.49e-08!27;UBERON:0005095!5.49e-08!27;UBERON:0007687!5.49e-08!27;UBERON:0004876!5.96e-08!20;UBERON:0000970!7.01e-08!20;UBERON:0001008!9.10e-08!45;UBERON:0000487!1.09e-07!22;UBERON:0001032!1.33e-07!24;UBERON:0004456!1.33e-07!24;UBERON:0006554!1.37e-07!44;UBERON:0001456!1.67e-07!21;UBERON:0002100!1.90e-07!216;UBERON:0002104!1.95e-07!21;UBERON:0000019!2.16e-07!19;UBERON:0000047!2.16e-07!19;UBERON:0004088!2.16e-07!19;UBERON:0003072!2.16e-07!19;UBERON:0003071!2.16e-07!19;UBERON:0004128!2.16e-07!19;UBERON:0005172!2.45e-07!55;UBERON:0005173!2.45e-07!55;UBERON:0001007!2.94e-07!155;UBERON:0001555!2.94e-07!155;UBERON:0007026!2.94e-07!155;UBERON:0000915!3.54e-07!52;UBERON:0000353!4.68e-07!17;UBERON:0001225!5.08e-07!13;UBERON:0008987!5.08e-07!13;UBERON:0000489!5.51e-07!32;UBERON:0000063!5.56e-07!97;UBERON:0003915!7.03e-07!9;UBERON:0004700!7.03e-07!9;UBERON:0001917!7.03e-07!9 | ||
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| ||
|short_description=p1@SEMA3F | |short_description=p1@SEMA3F | ||
}} | }} |
Revision as of 08:04, 17 November 2012
Short description: | p1@SEMA3F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SEMA3F_5end |
Coexpression cluster: | C1927_Corneal_Esophageal_Urothelial_Endothelial_Bronchial_Sebocyte_Tracheal |
Association with transcript: | 0bp_to_ENST00000413852_5end |
EntrezGene: | SEMA3F |
HGNC: | 10728 |
UniProt: | C9JPG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-31 | 253 |
embryonic cell | 3.82e-19 | 250 |
meso-epithelial cell | 1.92e-13 | 45 |
endothelial cell | 2.73e-13 | 36 |
squamous epithelial cell | 2.73e-13 | 63 |
endothelial cell of vascular tree | 1.72e-12 | 24 |
blood vessel endothelial cell | 8.12e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.12e-11 | 18 |
lining cell | 9.84e-11 | 58 |
barrier cell | 9.84e-11 | 58 |
endo-epithelial cell | 5.70e-10 | 42 |
endodermal cell | 1.80e-08 | 58 |
epithelial cell of nephron | 3.78e-08 | 15 |
general ecto-epithelial cell | 4.11e-08 | 14 |
mesodermal cell | 4.54e-08 | 121 |
kidney cell | 2.24e-07 | 17 |
kidney epithelial cell | 2.24e-07 | 17 |
endothelial cell of artery | 5.68e-07 | 9 |
kidney cortical cell | 9.44e-07 | 12 |
renal cortical epithelial cell | 9.44e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.