FFCP PHASE1:Hg19::chr2:176989037..176989043,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:176989037..176989043,+ | |||
|id=chr2:176989037..176989043,+ | |||
|ontology_enrichment_celltype=CL:0002681!2.49e-12!13;CL:0002584!2.49e-12!13;CL:1000449!1.94e-09!16;CL:1000497!4.64e-08!18;CL:0002518!4.64e-08!18;CL:0002078!1.70e-07!44;CL:1000612!2.13e-07!7;CL:1000746!2.13e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000239;8.07e-15;3!CL:1000615;8.07e-15;3!CL:0002306;8.07e-15;3!CL:0002681;2.82e-14;12!CL:0002584;2.82e-14;12!CL:0002581;3.64e-12;1!CL:1000449;1.81e-11;15!CL:0002078;4.38e-11;45!CL:1000497;3.82e-10;17!CL:0002518;3.82e-10;17!CL:0002188;1.76e-09;5!CL:0000115;2.45e-09;36!CL:0002138;5.35e-08;6!CL:0002139;3.26e-07;24!CL:1000746;5.18e-07;7!CL:1000612;5.18e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.28e-15,3;CL:1000615,4.28e-15,3;CL:0002306,4.28e-15,3;CL:0002681,2.29e-14,12;CL:0002584,2.29e-14,12;CL:0002078,5.23e-14,45;CL:0002581,2.93e-12,1;CL:1000449,1.54e-11,15;CL:1000497,3.31e-10,17;CL:0002518,3.31e-10,17;CL:0000115,4.25e-10,36;CL:0002188,2.00e-09,5;CL:0005020,5.17e-08,6;CL:0002138,5.17e-08,6;CL:0005022,5.17e-08,6;CL:0002139,3.54e-07,24;CL:1000746,5.67e-07,7;CL:1000612,5.67e-07,7 | |||
|ontology_enrichment_development_v019=CL:0005022;5.35e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001225!2.49e-12!13;UBERON:0008987!2.49e-12!13;UBERON:0003887!3.15e-12!21;UBERON:0002113!7.08e-12!27;UBERON:0003918!7.08e-12!27;UBERON:0005095!7.08e-12!27;UBERON:0007687!7.08e-12!27;UBERON:0004876!7.52e-12!20;UBERON:0000489!1.10e-11!32;UBERON:0000080!1.31e-11!18;UBERON:0002120!1.31e-11!18;UBERON:0004875!1.31e-11!18;UBERON:0005721!1.31e-11!18;UBERON:0005754!1.31e-11!18;UBERON:0007297!1.31e-11!18;UBERON:0006554!1.48e-10!44;UBERON:0006555!2.03e-10!17;UBERON:0005103!2.03e-10!17;UBERON:0000083!2.03e-10!17;UBERON:0009201!2.03e-10!17;UBERON:0004819!2.03e-10!17;UBERON:0006553!2.03e-10!17;UBERON:0003074!2.03e-10!17;UBERON:0003060!2.03e-10!17;UBERON:0001008!3.54e-10!45;UBERON:0003064!7.33e-10!37;UBERON:0001851!1.94e-09!16;UBERON:0004211!1.94e-09!16;UBERON:0001285!1.94e-09!16;UBERON:0007684!1.94e-09!16;UBERON:0003220!1.94e-09!16;UBERON:0004208!1.94e-09!16;UBERON:0000353!1.05e-08!17;UBERON:0003886!7.41e-08!63;UBERON:0000074!2.13e-07!7;UBERON:0001229!2.13e-07!7;UBERON:0001230!2.13e-07!7;UBERON:0005749!2.13e-07!7;UBERON:0004199!2.13e-07!7;UBERON:0004209!2.13e-07!7;UBERON:0004198!2.13e-07!7;UBERON:0000058!6.40e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;8.07e-15;3!UBERON:0007685;8.07e-15;3!UBERON:0004134;8.07e-15;3!UBERON:0001225;2.82e-14;12!UBERON:0008987;2.82e-14;12!UBERON:0001473;1.96e-12;8!UBERON:0004536;1.96e-12;8!UBERON:0006558;1.96e-12;8!UBERON:0006834;3.64e-12;1!UBERON:0001851;1.81e-11;15!UBERON:0006555;1.81e-11;15!UBERON:0000353;1.81e-11;15!UBERON:0004819;1.81e-11;15!UBERON:0001285;1.81e-11;15!UBERON:0007684;1.81e-11;15!UBERON:0002465;4.66e-10;10!UBERON:0002113;3.10e-07;24!UBERON:0011143;3.10e-07;24!UBERON:0000074;5.18e-07;7!UBERON:0001229;5.18e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,4.28e-15,3;UBERON:0007685,4.28e-15,3;UBERON:0004134,4.28e-15,3;UBERON:0001225,2.29e-14,12;UBERON:0008987,2.29e-14,12;UBERON:0001473,1.49e-12,8;UBERON:0004536,1.49e-12,8;UBERON:0006558,1.49e-12,8;UBERON:0006834,3.65e-12,1;UBERON:0001851,1.54e-11,15;UBERON:0004211,1.54e-11,15;UBERON:0009773,1.54e-11,15;UBERON:0000353,1.54e-11,15;UBERON:0001231,1.54e-11,15;UBERON:0001285,1.54e-11,15;UBERON:0007684,1.54e-11,15;UBERON:0004208,1.54e-11,15;UBERON:0006555,7.84e-11,16;UBERON:0004819,7.84e-11,16;UBERON:0002465,3.75e-10,10;UBERON:0010532,5.67e-07,7;UBERON:0000074,5.67e-07,7;UBERON:0001229,5.67e-07,7;UBERON:0001230,5.67e-07,7;UBERON:0003220,5.67e-07,7;UBERON:0005749,5.67e-07,7;UBERON:0004199,5.67e-07,7;UBERON:0004209,5.67e-07,7;UBERON:0004198,5.67e-07,7;UBERON:0005406,9.44e-07,2;UBERON:0002113,9.95e-07,26;UBERON:0003918,9.95e-07,26;UBERON:0011143,9.95e-07,26;UBERON:0005095,9.95e-07,26;UBERON:0007687,9.95e-07,26 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,1.20848795132744,0,0.24406205754817,1.10298924103761,0.81014194788176,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0.538168907066586,0.427114777637135,0.211931901159562,0,0.412210116953756,0,0.558350568994769,0,0.584622030967192,0.252433774244115,0.0920498986422993,0,0,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,2.31492756288305,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0,0,0,2.96836132889982,0,0.177561725313127,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.308061348417659,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,3.08454505380579,0.270946437543853,0.501689773854853,0.509752546090077,1.66215201785745,1.79099803777743,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,1.03423011972439,0.583209226766509,0,0,0,0,0,0,0,0,0.278847488557207,0.538651809526579,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,0,0.34945333648406,0.51595809741485,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0.627617077873999,0.203996435272644,0,0,0,0,0,0.788662062837943,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.734364233889974,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0.869526171664951,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.629063767423586,0.218419276384028,0.678930119816101,0.637724760305049,0.123935764259002,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.231051332300676,0,2.0710797781803,0.397832444232549,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.223710863595585,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0.219881033490858,1.35866559210006,0.0771741581079447,0,2.82190377816914,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0.682008283964155,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0,0,2.5670703278402,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr2:176989037..176989043,+ | |||
}} |
Revision as of 06:46, 21 January 2014
Short description: | p@chr2:176989037..176989043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:176989037..176989043, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.28e-15 | 3 |
kidney cortex tubule cell | 4.28e-15 | 3 |
epithelial cell of proximal tubule | 4.28e-15 | 3 |
kidney cortical cell | 2.29e-14 | 12 |
renal cortical epithelial cell | 2.29e-14 | 12 |
meso-epithelial cell | 5.23e-14 | 45 |
perirenal preadipocyte | 2.93e-12 | 1 |
epithelial cell of nephron | 1.54e-11 | 15 |
kidney cell | 3.31e-10 | 17 |
kidney epithelial cell | 3.31e-10 | 17 |
endothelial cell | 4.25e-10 | 36 |
glomerular endothelial cell | 2.00e-09 | 5 |
lymphangioblast | 5.17e-08 | 6 |
endothelial cell of lymphatic vessel | 5.17e-08 | 6 |
vascular lymphangioblast | 5.17e-08 | 6 |
endothelial cell of vascular tree | 3.54e-07 | 24 |
glomerular cell | 5.67e-07 | 7 |
kidney corpuscule cell | 5.67e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 4.28e-15 | 3 |
region of nephron tubule | 4.28e-15 | 3 |
proximal tubule | 4.28e-15 | 3 |
cortex of kidney | 2.29e-14 | 12 |
renal parenchyma | 2.29e-14 | 12 |
lymphatic vessel | 1.49e-12 | 8 |
lymph vasculature | 1.49e-12 | 8 |
lymphatic part of lymphoid system | 1.49e-12 | 8 |
uterus or analog | 3.65e-12 | 1 |
cortex | 1.54e-11 | 15 |
nephron epithelium | 1.54e-11 | 15 |
renal tubule | 1.54e-11 | 15 |
parenchyma | 1.54e-11 | 15 |
nephron tubule | 1.54e-11 | 15 |
nephron | 1.54e-11 | 15 |
uriniferous tubule | 1.54e-11 | 15 |
nephrogenic mesenchyme | 1.54e-11 | 15 |
excretory tube | 7.84e-11 | 16 |
kidney epithelium | 7.84e-11 | 16 |
lymphoid system | 3.75e-10 | 10 |
primitive nephron | 5.67e-07 | 7 |
renal glomerulus | 5.67e-07 | 7 |
renal corpuscle | 5.67e-07 | 7 |
glomerular capsule | 5.67e-07 | 7 |
metanephric mesenchyme | 5.67e-07 | 7 |
glomerular tuft | 5.67e-07 | 7 |
S-shaped body | 5.67e-07 | 7 |
renal vesicle | 5.67e-07 | 7 |
comma-shaped body | 5.67e-07 | 7 |
perirenal fat | 9.44e-07 | 2 |
kidney | 9.95e-07 | 26 |
kidney mesenchyme | 9.95e-07 | 26 |
upper urinary tract | 9.95e-07 | 26 |
kidney rudiment | 9.95e-07 | 26 |
kidney field | 9.95e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.53e-12 | 1 |