FFCP PHASE1:Hg19::chr11:131767210..131767232,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-208bp_to_ENST00000419440_5end | |||
|cluster_id=chr11:131767210..131767232,- | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_1_at_ENST00000419440_5end | |||
|id=chr11:131767210..131767232,- | |||
|ontology_enrichment_celltype=CL:0002368!1.24e-14!13;CL:0002077!1.60e-08!33;CL:0002159!5.04e-08!13;CL:0002202!5.72e-08!9;CL:0002632!5.72e-08!9;CL:0000220!1.15e-07!246;CL:0000515!1.21e-07!4;CL:0000066!1.49e-07!254;CL:0002321!1.67e-07!248;CL:0002328!4.42e-07!3;CL:0000068!4.69e-07!3;CL:0000069!4.69e-07!3;CL:0000307!4.69e-07!3;CL:0000377!4.69e-07!3;CL:0002076!5.45e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.72e-47;13!CL:0002202;5.82e-25;9!CL:0002632;5.82e-25;9!CL:0000307;6.92e-20;3!CL:0002328;1.50e-19;3!CL:0002076;2.94e-14;42!CL:0000228;1.18e-07;1!CL:0002372;1.18e-07;1!CL:0000244;2.06e-07;4!CL:0000731;2.06e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.66e-48,13;CL:0002202,3.98e-25,9;CL:0002632,3.98e-25,9;CL:0002328,6.94e-20,3;CL:0000068,8.43e-20,3;CL:0000069,8.43e-20,3;CL:0000307,8.43e-20,3;CL:0000377,8.43e-20,3;CL:0002076,8.45e-20,42;CL:0000223,1.02e-13,58;CL:0000066,3.26e-10,253;CL:0000228,9.72e-08,1;CL:0002372,9.72e-08,1;CL:0000244,1.93e-07,4;CL:0000731,1.93e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;6.92e-20;3!CL:0000223;1.59e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.01e-07;4!DOID:1612;1.01e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.74e-08,4;DOID:1612,9.74e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.89e-08!365;UBERON:0002100!9.43e-08!216;UBERON:0000488!3.53e-07!4;UBERON:0004815!4.42e-07!3;UBERON:0002031!4.42e-07!3;UBERON:0000119!6.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.50e-19;3!UBERON:0002031;1.50e-19;3!UBERON:0007196;8.51e-15;15!UBERON:0001558;8.51e-15;15!UBERON:0002185;5.83e-12;5!UBERON:0000065;1.62e-11;44!UBERON:0003126;7.93e-09;7!UBERON:0001005;7.93e-09;7!UBERON:0000485;1.09e-08;7!UBERON:0005178;1.55e-08;34!UBERON:0002224;1.55e-08;34!UBERON:0000915;9.70e-08;52!UBERON:0000072;2.59e-07;37!UBERON:0005181;2.72e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.94e-20,3;UBERON:0002031,6.94e-20,3;UBERON:0007196,6.82e-15,15;UBERON:0001558,6.82e-15,15;UBERON:0000065,1.60e-12,54;UBERON:0002185,3.69e-12,5;UBERON:0000915,7.77e-11,52;UBERON:0003126,8.61e-09,7;UBERON:0001005,8.61e-09,7;UBERON:0001004,1.32e-08,74;UBERON:0005178,1.69e-08,34;UBERON:0002224,1.69e-08,34;UBERON:0004119,2.83e-08,160;UBERON:0000925,2.83e-08,160;UBERON:0006595,2.83e-08,160;UBERON:0005181,3.13e-08,35;UBERON:0008947,1.63e-07,38;UBERON:0003258,1.63e-07,38;UBERON:0000485,5.78e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.886917589850256,0.263504357079378,0,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0.132409180813219,0,0,1.12135520028461,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.878002283269004,1.1240175325762,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,4.41114234667227,0.552485933615378,0,0,0,0,0.15403067420883,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,1.65284915360978,1.72971060628596,2.04180339991335,4.14746901507755,0.929691098594572,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0,0.949138274156178,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,2.11300293513511,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,1.25088746543166,1.34060455107157,2.17781969722645,0,0.86101074534246,0,1.33029046061003,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,4.58328590851367,0,0,0,0,0,0,0,0,16.4069489483697,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,1.10939738410511,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,1.36269994427607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,8.96436696664224,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.874862855734746,0,0,0.705797459094515,0,0,0,0,0,0,0,0,1.37304041038154,0.151230923763239,0,0.73927574994817,0,2.69881867298163,0,0,0.53168342911599,0.521745061811734,0,1.14241563650639,0,0,0.107410557042488,0.928067519756987,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,11.3456029929911,0.39246546425257,0,0,0,6.69375532777726,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.134704106029175,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000419440 | |||
}} |
Latest revision as of 20:04, 23 July 2015
Short description: | p1@ENST00000419440 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000419440_5end |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | -208bp_to_ENST00000419440_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.66e-48 | 13 |
epithelial cell of tracheobronchial tree | 3.98e-25 | 9 |
epithelial cell of lower respiratory tract | 3.98e-25 | 9 |
bronchial epithelial cell | 6.94e-20 | 3 |
duct epithelial cell | 8.43e-20 | 3 |
branched duct epithelial cell | 8.43e-20 | 3 |
tracheal epithelial cell | 8.43e-20 | 3 |
tracheoblast | 8.43e-20 | 3 |
endo-epithelial cell | 8.45e-20 | 42 |
endodermal cell | 1.02e-13 | 58 |
epithelial cell | 3.26e-10 | 253 |
multinucleate cell | 9.72e-08 | 1 |
myotube | 9.72e-08 | 1 |
transitional epithelial cell | 1.93e-07 | 4 |
urothelial cell | 1.93e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.94e-20 | 3 |
epithelium of bronchus | 6.94e-20 | 3 |
tracheobronchial tree | 6.82e-15 | 15 |
lower respiratory tract | 6.82e-15 | 15 |
respiratory tract | 1.60e-12 | 54 |
bronchus | 3.69e-12 | 5 |
thoracic segment of trunk | 7.77e-11 | 52 |
trachea | 8.61e-09 | 7 |
respiratory airway | 8.61e-09 | 7 |
respiratory system | 1.32e-08 | 74 |
thoracic cavity element | 1.69e-08 | 34 |
thoracic cavity | 1.69e-08 | 34 |
endoderm-derived structure | 2.83e-08 | 160 |
endoderm | 2.83e-08 | 160 |
presumptive endoderm | 2.83e-08 | 160 |
thoracic segment organ | 3.13e-08 | 35 |
respiratory primordium | 1.63e-07 | 38 |
endoderm of foregut | 1.63e-07 | 38 |
simple columnar epithelium | 5.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.74e-08 | 4 |
breast cancer | 9.74e-08 | 4 |