FFCP PHASE1:Hg19::chr17:75137492..75137507,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:75137492..75137507,+
|short_description=p@chr17:75137492..75137507,+
|description=CAGE_peak_at_chr17:75137492..75137507,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:75137492..75137507,+ | |||
|description=CAGE_peak_at_chr17:75137492..75137507,+ | |||
|id=chr17:75137492..75137507,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.82e-33!35;CL:0002139!1.34e-31!24;CL:0002078!1.43e-24!44;CL:0000071!6.72e-23!18;CL:0002546!6.72e-23!18;CL:0000213!4.16e-18!57;CL:0000215!4.16e-18!57;CL:1000413!2.26e-15!9;CL:0002544!9.28e-11!6;CL:0005020!2.72e-10!6;CL:0002138!2.72e-10!6;CL:0005022!2.72e-10!6;CL:0000094!2.91e-08!8;CL:0002543!9.02e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.96e-70;24!CL:0000115;7.94e-70;36!CL:0000071;1.14e-61;18!CL:1000413;2.81e-36;9!CL:0002078;4.47e-36;45!CL:0002544;4.25e-28;6!CL:0000213;5.70e-28;58!CL:0000215;5.70e-28;58!CL:0000094;1.09e-22;8!CL:0000775;1.72e-22;3!CL:0002618;2.27e-21;3!CL:0002543;1.60e-18;6!CL:0000081;1.86e-16;11!CL:0000771;1.11e-15;2!CL:0002262;6.58e-15;2!CL:1000398;6.58e-15;2!CL:0002545;1.28e-14;2!CL:0002188;4.67e-13;5!CL:0002138;5.00e-11;6!CL:0000076;1.97e-10;63!CL:0002144;2.30e-10;3!CL:1000746;1.80e-09;7!CL:1000612;1.80e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.06e-80,36;CL:0002139,5.67e-70,24;CL:0002078,2.47e-63,45;CL:0000071,8.03e-62,18;CL:0002546,8.03e-62,18;CL:0000213,2.83e-48,58;CL:0000215,2.83e-48,58;CL:1000413,3.31e-36,9;CL:0002544,4.77e-28,6;CL:0000094,1.07e-22,8;CL:0000775,1.72e-22,3;CL:0002618,1.44e-21,3;CL:0000222,4.41e-21,121;CL:0002543,1.09e-18,6;CL:0000081,1.83e-16,11;CL:0000076,5.98e-16,63;CL:0000771,1.07e-15,2;CL:0002262,7.31e-15,2;CL:1000398,7.31e-15,2;CL:0002545,1.28e-14,2;CL:0002188,4.05e-13,5;CL:0005020,5.45e-11,6;CL:0002138,5.45e-11,6;CL:0005022,5.45e-11,6;CL:0002144,2.15e-10,3;CL:1000746,1.62e-09,7;CL:1000612,1.62e-09,7;CL:0000066,5.51e-09,253;CL:0002321,5.06e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;1.14e-61;18!CL:0005022;5.00e-11;6!CL:0000222;4.56e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.72e-23!18;UBERON:0004638!6.72e-23!18;UBERON:0004852!6.72e-23!18;UBERON:0000487!9.44e-18!22;UBERON:0003915!2.26e-15!9;UBERON:0004700!2.26e-15!9;UBERON:0001917!2.26e-15!9;UBERON:0006914!5.44e-15!25;UBERON:0007023!3.80e-13!115;UBERON:0000025!7.31e-13!194;UBERON:0004111!1.39e-12!241;UBERON:0000055!7.99e-11!69;UBERON:0000477!3.94e-10!286;UBERON:0002049!3.50e-09!79;UBERON:0007798!3.50e-09!79;UBERON:0001009!2.34e-08!113;UBERON:0004872!1.13e-07!84;UBERON:0001473!1.91e-07!8;UBERON:0004536!1.91e-07!8;UBERON:0006558!1.91e-07!8;UBERON:0004535!1.97e-07!110;UBERON:0002465!2.61e-07!10;UBERON:0001981!3.41e-07!60;UBERON:0007500!3.41e-07!60;UBERON:0004537!3.41e-07!60;UBERON:0006965!3.41e-07!60;UBERON:0003914!5.06e-07!118;UBERON:0000353!8.44e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-61;18!UBERON:0001986;1.14e-61;18!UBERON:0004852;1.14e-61;18!UBERON:0000487;4.90e-50;22!UBERON:0006914;9.47e-44;25!UBERON:0003915;2.81e-36;9!UBERON:0004700;2.81e-36;9!UBERON:0001917;2.81e-36;9!UBERON:0000490;8.33e-33;33!UBERON:0000055;2.58e-18;65!UBERON:0007500;9.67e-16;56!UBERON:0001981;9.67e-16;56!UBERON:0004537;9.67e-16;56!UBERON:0001281;6.58e-15;2!UBERON:0003497;6.58e-15;2!UBERON:0003909;6.58e-15;2!UBERON:0003835;6.58e-15;2!UBERON:0005800;1.28e-14;2!UBERON:0001515;1.28e-14;2!UBERON:0003914;2.30e-14;74!UBERON:0002066;4.67e-13;5!UBERON:0001638;2.04e-12;9!UBERON:0003920;2.04e-12;9!UBERON:0004582;2.04e-12;9!UBERON:0002049;1.06e-11;75!UBERON:0007798;1.06e-11;75!UBERON:0000353;2.07e-11;15!UBERON:0000025;1.16e-10;93!UBERON:0010523;2.30e-10;3!UBERON:0001915;2.30e-10;3!UBERON:0001982;2.30e-10;3!UBERON:0001280;3.05e-10;3!UBERON:0004647;3.05e-10;3!UBERON:0000074;1.80e-09;7!UBERON:0001229;1.80e-09;7!UBERON:0001473;2.17e-08;8!UBERON:0004536;2.17e-08;8!UBERON:0006558;2.17e-08;8!UBERON:0004535;2.89e-08;109!UBERON:0000947;6.34e-08;21!UBERON:0010191;6.34e-08;21!UBERON:0001009;6.78e-08;112!UBERON:0010260;1.81e-07;9!UBERON:0001637;2.11e-07;42!UBERON:0003509;2.11e-07;42!UBERON:0004572;2.11e-07;42!UBERON:0002465;8.45e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.03e-62,18;UBERON:0001986,8.03e-62,18;UBERON:0004852,8.03e-62,18;UBERON:0000487,3.70e-50,22;UBERON:0006914,7.39e-44,25;UBERON:0003915,3.31e-36,9;UBERON:0004700,3.31e-36,9;UBERON:0001917,3.31e-36,9;UBERON:0000055,3.26e-29,68;UBERON:0002049,5.06e-25,78;UBERON:0007798,5.06e-25,78;UBERON:0007500,2.96e-23,59;UBERON:0001981,2.96e-23,59;UBERON:0004537,2.96e-23,59;UBERON:0006965,2.96e-23,59;UBERON:0004535,5.12e-19,109;UBERON:0001009,2.08e-18,112;UBERON:0004872,1.08e-15,83;UBERON:0003914,1.60e-15,117;UBERON:0001281,7.31e-15,2;UBERON:0003497,7.31e-15,2;UBERON:0003909,7.31e-15,2;UBERON:0003835,7.31e-15,2;UBERON:0005800,1.28e-14,2;UBERON:0001515,1.28e-14,2;UBERON:0002066,3.57e-13,5;UBERON:0001638,1.58e-12,9;UBERON:0003920,1.58e-12,9;UBERON:0004582,1.58e-12,9;UBERON:0000353,1.98e-11,15;UBERON:0010523,2.15e-10,3;UBERON:0001915,2.15e-10,3;UBERON:0001982,2.15e-10,3;UBERON:0001280,3.27e-10,3;UBERON:0004647,3.27e-10,3;UBERON:0005171,3.27e-10,3;UBERON:0000490,5.00e-10,148;UBERON:0010532,1.62e-09,7;UBERON:0000074,1.62e-09,7;UBERON:0001229,1.62e-09,7;UBERON:0001230,1.62e-09,7;UBERON:0003220,1.62e-09,7;UBERON:0005749,1.62e-09,7;UBERON:0004199,1.62e-09,7;UBERON:0004209,1.62e-09,7;UBERON:0004198,1.62e-09,7;UBERON:0000058,5.57e-09,19;UBERON:0004111,1.42e-08,240;UBERON:0003081,1.89e-08,203;UBERON:0005103,2.20e-08,8;UBERON:0000083,2.20e-08,8;UBERON:0009201,2.20e-08,8;UBERON:0006553,2.20e-08,8;UBERON:0003074,2.20e-08,8;UBERON:0003060,2.20e-08,8;UBERON:0001473,2.31e-08,8;UBERON:0004536,2.31e-08,8;UBERON:0006558,2.31e-08,8;UBERON:0000025,4.92e-08,192;UBERON:0000947,6.54e-08,21;UBERON:0010191,6.54e-08,21;UBERON:0010260,1.57e-07,9;UBERON:0000080,1.68e-07,9;UBERON:0002120,1.68e-07,9;UBERON:0004875,1.68e-07,9;UBERON:0005721,1.68e-07,9;UBERON:0005754,1.68e-07,9;UBERON:0007297,1.68e-07,9;UBERON:0001637,3.80e-07,42;UBERON:0003509,3.80e-07,42;UBERON:0004572,3.80e-07,42;UBERON:0002465,8.89e-07,10 | |||
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|short_description=p@chr17:75137492..75137507,+ | |||
}} | }} |
Latest revision as of 21:39, 25 July 2015
Short description: | p@chr17:75137492..75137507, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75137492..75137507, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.06e-80 | 36 |
endothelial cell of vascular tree | 5.67e-70 | 24 |
meso-epithelial cell | 2.47e-63 | 45 |
blood vessel endothelial cell | 8.03e-62 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.03e-62 | 18 |
lining cell | 2.83e-48 | 58 |
barrier cell | 2.83e-48 | 58 |
endothelial cell of artery | 3.31e-36 | 9 |
aortic endothelial cell | 4.77e-28 | 6 |
granulocyte | 1.07e-22 | 8 |
neutrophil | 1.72e-22 | 3 |
endothelial cell of umbilical vein | 1.44e-21 | 3 |
mesodermal cell | 4.41e-21 | 121 |
vein endothelial cell | 1.09e-18 | 6 |
blood cell | 1.83e-16 | 11 |
squamous epithelial cell | 5.98e-16 | 63 |
eosinophil | 1.07e-15 | 2 |
endothelial cell of sinusoid | 7.31e-15 | 2 |
endothelial cell of hepatic sinusoid | 7.31e-15 | 2 |
thoracic aorta endothelial cell | 1.28e-14 | 2 |
glomerular endothelial cell | 4.05e-13 | 5 |
lymphangioblast | 5.45e-11 | 6 |
endothelial cell of lymphatic vessel | 5.45e-11 | 6 |
vascular lymphangioblast | 5.45e-11 | 6 |
capillary endothelial cell | 2.15e-10 | 3 |
glomerular cell | 1.62e-09 | 7 |
kidney corpuscule cell | 1.62e-09 | 7 |
epithelial cell | 5.51e-09 | 253 |
embryonic cell | 5.06e-08 | 250 |