FFCP PHASE1:Hg19::chr20:60921215..60921221,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:60921215..60921221,-
|short_description=p@chr20:60921215..60921221,-
|description=CAGE_peak_at_chr20:60921215..60921221,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:60921215..60921221,- | |||
|description=CAGE_peak_at_chr20:60921215..60921221,- | |||
|id=chr20:60921215..60921221,- | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-22!254;CL:0000223!3.10e-12!59;CL:0002076!7.43e-10!43;CL:0002321!2.00e-08!248;CL:0000220!6.04e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.23e-17;2!CL:1000500;1.23e-17;2!CL:1000618;1.23e-17;2!CL:1001318;1.23e-17;2!CL:0002173;1.23e-17;2!CL:1000449;9.29e-14;15!CL:1000507;1.49e-13;10!CL:1000494;1.49e-13;10!CL:1000497;4.00e-12;17!CL:0002518;4.00e-12;17!CL:0002681;2.51e-11;12!CL:0002584;2.51e-11;12!CL:1000746;2.71e-11;7!CL:1000612;2.71e-11;7!CL:0000313;3.90e-10;1!CL:0002252;1.10e-09;1!CL:0000669;2.78e-09;4!CL:0002251;7.49e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.46e-17,2;CL:1000500,1.46e-17,2;CL:1000618,1.46e-17,2;CL:1001318,1.46e-17,2;CL:0002173,1.46e-17,2;CL:1000449,9.46e-14,15;CL:1000507,1.77e-13,10;CL:1000494,1.77e-13,10;CL:1000497,4.06e-12,17;CL:0002518,4.06e-12,17;CL:1000746,2.49e-11,7;CL:1000612,2.49e-11,7;CL:0002681,2.81e-11,12;CL:0002584,2.81e-11,12;CL:0000313,3.74e-10,1;CL:0002252,1.15e-09,1;CL:0000669,3.04e-09,4;CL:0000066,1.60e-07,253;CL:0002251,7.51e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.90e-10;1!UBERON:0010227;1.10e-09;1!UBERON:0005754;1.10e-09;1 | |||
|ontology_enrichment_disease=DOID:305!3.55e-14!106;DOID:0050687!9.14e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.90e-10;1!DOID:1799;1.10e-09;1!DOID:10165;1.10e-09;1!DOID:178;1.10e-09;1!DOID:326;1.10e-09;1!DOID:3978;1.10e-09;1!DOID:3394;1.10e-09;1!DOID:5844;1.10e-09;1!DOID:3112;1.10e-09;1!DOID:1798;1.10e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.74e-10,1;DOID:178,4.46e-10,1;DOID:326,4.46e-10,1;DOID:3978,4.46e-10,1;DOID:3394,4.46e-10,1;DOID:5844,4.46e-10,1;DOID:3112,4.87e-10,1;DOID:1799,2.46e-09,1;DOID:10165,2.46e-09,1;DOID:1798,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-10!169;UBERON:0000925!2.27e-10!169;UBERON:0006595!2.27e-10!169;UBERON:0000481!2.41e-10!347;UBERON:0001007!9.68e-10!155;UBERON:0001555!9.68e-10!155;UBERON:0007026!9.68e-10!155;UBERON:0004921!7.00e-08!129;UBERON:0004185!7.00e-08!129;UBERON:0000477!2.87e-07!286;UBERON:0000077!5.72e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.23e-17;2!UBERON:0003838;1.23e-17;2!UBERON:0003586;1.23e-17;2!UBERON:0005169;1.23e-17;2!UBERON:0002321;1.23e-17;2!UBERON:0005215;1.23e-17;2!UBERON:0002303;1.23e-17;2!UBERON:0002319;1.23e-17;2!UBERON:0006555;9.29e-14;15!UBERON:0000353;9.29e-14;15!UBERON:0004819;9.29e-14;15!UBERON:0001285;9.29e-14;15!UBERON:0007684;9.29e-14;15!UBERON:0004211;1.49e-13;10!UBERON:0009773;1.49e-13;10!UBERON:0001231;1.49e-13;10!UBERON:0004810;1.49e-13;10!UBERON:0001225;2.51e-11;12!UBERON:0008987;2.51e-11;12!UBERON:0000074;2.71e-11;7!UBERON:0001229;2.71e-11;7!UBERON:0004911;3.90e-10;1!UBERON:0002079;1.10e-09;1!UBERON:0000998;1.10e-09;1!UBERON:0006868;1.10e-09;1!UBERON:0003343;2.78e-09;4!UBERON:0003891;2.78e-09;4!UBERON:0004785;2.78e-09;4!UBERON:0001851;4.29e-09;15!UBERON:0002113;1.53e-08;24!UBERON:0011143;1.53e-08;24!UBERON:0000489;4.91e-07;29!UBERON:0006554;8.56e-07;30!UBERON:0001008;8.56e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.46e-17,2;UBERON:0003838,1.46e-17,2;UBERON:0003586,1.46e-17,2;UBERON:0005169,1.46e-17,2;UBERON:0002321,1.46e-17,2;UBERON:0005215,1.46e-17,2;UBERON:0002303,1.46e-17,2;UBERON:0002319,1.46e-17,2;UBERON:0000080,5.34e-15,9;UBERON:0002120,5.34e-15,9;UBERON:0004875,5.34e-15,9;UBERON:0005721,5.34e-15,9;UBERON:0005754,5.34e-15,9;UBERON:0007297,5.34e-15,9;UBERON:0004211,9.46e-14,15;UBERON:0009773,9.46e-14,15;UBERON:0001231,9.46e-14,15;UBERON:0001285,9.46e-14,15;UBERON:0007684,9.46e-14,15;UBERON:0004208,9.46e-14,15;UBERON:0000353,9.99e-14,15;UBERON:0004810,1.77e-13,10;UBERON:0006555,6.97e-13,16;UBERON:0004819,6.97e-13,16;UBERON:0004876,2.60e-12,11;UBERON:0010532,2.49e-11,7;UBERON:0000074,2.49e-11,7;UBERON:0001229,2.49e-11,7;UBERON:0001230,2.49e-11,7;UBERON:0003220,2.49e-11,7;UBERON:0005749,2.49e-11,7;UBERON:0004199,2.49e-11,7;UBERON:0004209,2.49e-11,7;UBERON:0004198,2.49e-11,7;UBERON:0003887,2.66e-11,12;UBERON:0001225,2.81e-11,12;UBERON:0008987,2.81e-11,12;UBERON:0002113,4.88e-11,26;UBERON:0003918,4.88e-11,26;UBERON:0011143,4.88e-11,26;UBERON:0005095,4.88e-11,26;UBERON:0007687,4.88e-11,26;UBERON:0000058,7.94e-11,19;UBERON:0004911,3.74e-10,1;UBERON:0005103,5.59e-10,8;UBERON:0000083,5.59e-10,8;UBERON:0009201,5.59e-10,8;UBERON:0006553,5.59e-10,8;UBERON:0003074,5.59e-10,8;UBERON:0003060,5.59e-10,8;UBERON:0002079,8.91e-10,1;UBERON:0000998,1.62e-09,1;UBERON:0006868,1.62e-09,1;UBERON:0003891,3.04e-09,4;UBERON:0000489,3.50e-09,31;UBERON:0003343,3.58e-09,4;UBERON:0004785,3.58e-09,4;UBERON:0001851,4.69e-09,15;UBERON:0003103,1.31e-08,68;UBERON:0005172,8.91e-07,54;UBERON:0005173,8.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.665188192387692,0.087834785693126,0,0.728590576585084,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.516628905878827,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.464775771478074,0,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.491953754172454,0,0,0,0.402115889646523,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.802025881213139,0.552485933615378,0,0,0,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0,1.54227252690289,1.62567862526312,1.00337954770971,0,0,1.11937377361089,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0.472775363535873,0,0,0,0,0.120596438625408,0,0.552896299656123,0,0,0,0,0,0.227884111694002,0.23056390438806,0.359030577639089,0.651884231532048,0.31900115973192,0,0.533034776018635,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.632994193584081,0.326465616318295,0.424059214301822,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,0.694238953340524,0.293977192243133,0.34823682632161,0,0,0.0967563312890851,0.438535902517113,0.164230914106418,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0,0,0.160317640503067,0.213452994739353,1.59847687665704,0.288180834308212,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0.858452096273142,0,0.0671834724867263,0,0,0.315132729228895,0.247247575143499,0.337017719270924,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0,0.335434687599266,0.157611414598396,0.262272940674991,0.105600336519406,1.07572403599707,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0.250381861413,0,0.221858103073705,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0.28984205722165,0.447764408660622,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,0.521988583930423,1.58694147858591,0,0.244736704506468,0,0,1.09642024789354,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,1.28400018965175,1.27078232765372,0,0,0,0,0,0,1.04762677792569,1.63771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0.0657727735628491,0.354581522651905,0.111231401892069,0.156986185701028,0,0,0.913158720509496,0.647782773655864,0,0.142953088353313,0.316027223465453,0,0,0.801711364730253,0,0.17071847709395,0,0,0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| ||
|short_description=p@chr20:60921215..60921221,- | |||
}} | }} |
Latest revision as of 16:07, 28 July 2015
Short description: | p@chr20:60921215..60921221, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:60921215..60921221, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.46e-17 | 2 |
kidney interstitial cell | 1.46e-17 | 2 |
juxtaglomerular complex cell | 1.46e-17 | 2 |
renal interstitial pericyte | 1.46e-17 | 2 |
extraglomerular mesangial cell | 1.46e-17 | 2 |
epithelial cell of nephron | 9.46e-14 | 15 |
kidney tubule cell | 1.77e-13 | 10 |
nephron tubule epithelial cell | 1.77e-13 | 10 |
kidney cell | 4.06e-12 | 17 |
kidney epithelial cell | 4.06e-12 | 17 |
glomerular cell | 2.49e-11 | 7 |
kidney corpuscule cell | 2.49e-11 | 7 |
kidney cortical cell | 2.81e-11 | 12 |
renal cortical epithelial cell | 2.81e-11 | 12 |
serous secreting cell | 3.74e-10 | 1 |
epithelial cell of esophagus | 1.15e-09 | 1 |
pericyte cell | 3.04e-09 | 4 |
epithelial cell | 1.60e-07 | 253 |
epithelial cell of alimentary canal | 7.51e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.74e-10 | 1 |
vascular disease | 4.46e-10 | 1 |
ischemia | 4.46e-10 | 1 |
extrinsic cardiomyopathy | 4.46e-10 | 1 |
myocardial ischemia | 4.46e-10 | 1 |
myocardial infarction | 4.46e-10 | 1 |
papillary adenocarcinoma | 4.87e-10 | 1 |
islet cell tumor | 2.46e-09 | 1 |
endocrine pancreas cancer | 2.46e-09 | 1 |
pancreatic endocrine carcinoma | 2.46e-09 | 1 |