FFCP PHASE1:Hg19::chr2:45171888..45171968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:45171888..45171968,+ | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_at_chr2:45171888..45171968,+ | |description=CAGE_peak_at_chr2:45171888..45171968,+ | ||
|id=chr2:45171888..45171968,+ | |id=chr2:45171888..45171968,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.67e-08!5;CL:0000306!1.25e-07!4;CL:0002222!1.25e-07!4;CL:0002224!1.25e-07!4 | |ontology_enrichment_celltype=CL:0002322!5.67e-08!5;CL:0000306!1.25e-07!4;CL:0002222!1.25e-07!4;CL:0002224!1.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.57e-16;4!CL:0002222;7.57e-16;4!CL:0002224;7.57e-16;4!CL:0000064;6.38e-13;3!CL:0000067;6.38e-13;3!CL:0005012;6.38e-13;3!CL:0002304;6.38e-13;3!CL:0002586;8.76e-13;3!CL:0000149;1.08e-09;4!CL:0000075;5.12e-08;27!CL:0000333;2.67e-07;5!CL:0000147;6.93e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.75e-16,4;CL:0002222,9.75e-16,4;CL:0002224,9.75e-16,4;CL:0000064,6.79e-13,3;CL:0000067,6.79e-13,3;CL:0005012,6.79e-13,3;CL:0002304,6.79e-13,3;CL:0002586,1.01e-12,3;CL:0000149,1.20e-09,4;CL:0000075,5.31e-08,27;CL:0000147,6.85e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.11e-12;3!UBERON:0010122;9.93e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;6.07e-42;11!UBERON:0002104;1.35e-39;21!UBERON:0000970;1.60e-36;20!UBERON:0001032;3.52e-34;24!UBERON:0004456;3.52e-34;24!UBERON:0000019;5.03e-33;19!UBERON:0000047;5.03e-33;19!UBERON:0004088;5.03e-33;19!UBERON:0010230;5.03e-33;19!UBERON:0000020;2.60e-31;23!UBERON:0001456;1.39e-29;21!UBERON:0000966;1.76e-20;5!UBERON:0005388;1.76e-20;5!UBERON:0001802;1.76e-20;5!UBERON:0009663;3.21e-19;7!UBERON:0001801;4.77e-17;14!UBERON:0000488;8.80e-17;4!UBERON:0010077;7.57e-16;4!UBERON:0005389;7.57e-16;4!UBERON:0000484;7.57e-16;4!UBERON:0000965;7.57e-16;4!UBERON:0001803;7.57e-16;4!UBERON:0000369;8.50e-16;4!UBERON:0002435;8.50e-16;4!UBERON:0000204;8.50e-16;4!UBERON:0010371;1.98e-15;31!UBERON:0002420;8.23e-15;9!UBERON:0000125;8.23e-15;9!UBERON:0007245;8.23e-15;9!UBERON:0002308;8.23e-15;9!UBERON:0010009;8.23e-15;9!UBERON:0010011;8.23e-15;9!UBERON:0000454;8.23e-15;9!UBERON:0001894;4.04e-14;7!UBERON:0001778;6.38e-13;3!UBERON:0001775;6.38e-13;3!UBERON:0001781;8.76e-13;3!UBERON:0001782;8.76e-13;3!UBERON:0005383;1.49e-12;3!UBERON:0005382;1.49e-12;3!UBERON:0002203;3.35e-11;6!UBERON:0001768;3.35e-11;6!UBERON:0002200;3.35e-11;6!UBERON:0000007;2.53e-09;2!UBERON:0006876;6.42e-09;11!UBERON:0001873;9.93e-09;2!UBERON:0001897;1.07e-08;2!UBERON:0010225;1.07e-08;2!UBERON:0002780;1.58e-08;41!UBERON:0001890;1.58e-08;41!UBERON:0001444;1.82e-08;48!UBERON:0001875;1.87e-08;2!UBERON:0006514;1.87e-08;2!UBERON:0000955;2.00e-07;68!UBERON:0001016;2.64e-07;83!UBERON:0000013;2.67e-07;5!UBERON:0002410;2.67e-07;5!UBERON:0000033;3.32e-07;50!UBERON:0000073;7.91e-07;53!UBERON:0002616;7.91e-07;53!UBERON:0000010;9.09e-07;8 | |||
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|short_description=p@chr2:45171888..45171968,+ | |short_description=p@chr2:45171888..45171968,+ | ||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45171888..45171968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45171888..45171968, + |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.75e-16 | 4 |
vertebrate lens cell | 9.75e-16 | 4 |
lens epithelial cell | 9.75e-16 | 4 |
ciliated cell | 6.79e-13 | 3 |
ciliated epithelial cell | 6.79e-13 | 3 |
multi-ciliated epithelial cell | 6.79e-13 | 3 |
non-pigmented ciliary epithelial cell | 6.79e-13 | 3 |
retinal pigment epithelial cell | 1.01e-12 | 3 |
visual pigment cell | 1.20e-09 | 4 |
columnar/cuboidal epithelial cell | 5.31e-08 | 27 |
pigment cell | 6.85e-07 | 14 |