FFCP PHASE1:Hg19::chr6:129908113..129908144,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:129908113..129908144,- | |||
|description=CAGE_peak_at_chr6:129908113..129908144,- | |||
|id=chr6:129908113..129908144,- | |||
|ontology_enrichment_celltype=CL:0002622!3.05e-16!3;CL:0002363!3.17e-12!2;CL:0000008!3.17e-12!2;CL:0002367!3.96e-12!2;CL:0002602!5.53e-12!2;CL:0000057!1.63e-11!75;CL:1000487!1.94e-11!2;CL:0002552!1.42e-10!5;CL:0002556!2.74e-09!6;CL:0002582!3.17e-08!3;CL:0002564!5.64e-08!3;CL:0002591!4.43e-07!1;CL:0002379!5.57e-07!1;CL:0000055!7.86e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.61e-37;6!CL:0002591;1.11e-25;1!CL:0002363;9.40e-14;2!CL:0002582;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.34e-37,6;CL:0002591,1.26e-25,1;CL:0002363,1.07e-13,2;CL:0000008,1.07e-13,2;CL:0000057,7.54e-12,76;CL:0002582,1.54e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000008;9.40e-14;2 | |||
|ontology_enrichment_disease=DOID:3620!5.57e-07!1;DOID:3565!5.57e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3307;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0003566!3.17e-12!2;UBERON:0001777!3.17e-12!2;UBERON:0005969!3.96e-12!2;UBERON:0003956!3.96e-12!2;UBERON:0009568!5.53e-12!2;UBERON:0002216!5.53e-12!2;UBERON:0002209!5.53e-12!2;UBERON:0002213!5.53e-12!2;UBERON:0004267!5.53e-12!2;UBERON:0006444!5.53e-12!2;UBERON:0001995!5.53e-12!2;UBERON:0004715!5.53e-12!2;UBERON:0001468!5.53e-12!2;UBERON:0001130!5.53e-12!2;UBERON:0001066!5.53e-12!2;UBERON:0002367!1.06e-11!11;UBERON:0010147!1.06e-11!11;UBERON:0009846!1.06e-11!11;UBERON:0003353!1.06e-11!11;UBERON:0004902!1.06e-11!11;UBERON:0003820!1.06e-11!11;UBERON:0009847!1.06e-11!11;UBERON:0003102!2.73e-11!95;UBERON:0000075!9.49e-11!13;UBERON:0005944!9.49e-11!13;UBERON:0004288!9.49e-11!13;UBERON:0003089!9.49e-11!13;UBERON:0003937!1.04e-10!12;UBERON:0005399!1.04e-10!12;UBERON:0001444!6.94e-10!48;UBERON:0001758!2.74e-09!6;UBERON:0003672!2.74e-09!6;UBERON:0000162!3.76e-09!14;UBERON:0001353!3.76e-09!14;UBERON:0000163!3.76e-09!14;UBERON:0006866!3.76e-09!14;UBERON:0000164!3.76e-09!14;UBERON:0000931!3.76e-09!14;UBERON:0000161!1.42e-08!35;UBERON:0004122!1.58e-08!15;UBERON:0002418!2.84e-08!3;UBERON:0004755!2.84e-08!3;UBERON:0002242!5.64e-08!3;UBERON:0003068!5.64e-08!3;UBERON:0002328!5.64e-08!3;UBERON:0004880!5.64e-08!3;UBERON:0000914!3.08e-07!83;UBERON:0002329!3.08e-07!83;UBERON:0003077!3.08e-07!83;UBERON:0003059!3.08e-07!83;UBERON:0007282!3.08e-07!83;UBERON:0009618!3.08e-07!83;UBERON:0007285!3.08e-07!83;UBERON:0001828!9.09e-07!8;UBERON:0000165!9.88e-07!28;UBERON:0000930!9.88e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.61e-37;6!UBERON:0003672;1.61e-37;6!UBERON:0003129;2.71e-32;7!UBERON:0011137;7.24e-21;11!UBERON:0010323;7.24e-21;11!UBERON:0000075;1.37e-14;16!UBERON:0000165;1.39e-14;28!UBERON:0003566;9.40e-14;2!UBERON:0001777;9.40e-14;2!UBERON:0000078;1.46e-13;2!UBERON:0002012;1.46e-13;2!UBERON:0008886;1.46e-13;2!UBERON:0001444;6.27e-12;48!UBERON:0010313;7.48e-11;10!UBERON:0000033;2.36e-10;50!UBERON:0000153;4.92e-10;54!UBERON:0007811;6.42e-09;52!UBERON:0003891;1.59e-07;4!UBERON:0000964;1.59e-07;4!UBERON:0010409;1.59e-07;4!UBERON:0001434;6.35e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.34e-37,6;UBERON:0003672,1.34e-37,6;UBERON:0003129,2.31e-32,7;UBERON:0010323,6.54e-21,11;UBERON:0011137,1.33e-16,14;UBERON:0000033,5.22e-16,56;UBERON:0000075,1.27e-14,16;UBERON:0000153,1.78e-14,62;UBERON:0007811,1.78e-14,62;UBERON:0000165,3.78e-14,29;UBERON:0000930,3.78e-14,29;UBERON:0003566,1.07e-13,2;UBERON:0001777,1.07e-13,2;UBERON:0000078,1.55e-13,2;UBERON:0007497,1.55e-13,2;UBERON:0003643,1.55e-13,2;UBERON:0003504,1.55e-13,2;UBERON:0003469,1.55e-13,2;UBERON:0003496,1.55e-13,2;UBERON:0002012,1.55e-13,2;UBERON:0008886,1.55e-13,2;UBERON:0007303,1.55e-13,2;UBERON:0002061,1.55e-13,2;UBERON:0005432,1.55e-13,2;UBERON:0004363,1.55e-13,2;UBERON:0001444,6.49e-13,49;UBERON:0010313,8.06e-11,10;UBERON:0002342,8.06e-11,10;UBERON:0005062,8.06e-11,10;UBERON:0004145,1.81e-09,3;UBERON:0003102,4.24e-09,99;UBERON:0003891,1.69e-07,4;UBERON:0000964,1.69e-07,4;UBERON:0010409,1.69e-07,4;UBERON:0004348,1.69e-07,4;UBERON:0005427,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.816616685019573,2.94802361548243,0.103325781175765,0,0,0,0,2.35670559535693,1.50142223846357,2.21651292387346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07701771673448,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8614456457388,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:129908113..129908144,- | |||
}} |
Latest revision as of 19:19, 30 July 2015
Short description: | p@chr6:129908113..129908144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:129908113..129908144, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.34e-37 | 6 |
smooth muscle cell of the pulmonary artery | 1.26e-25 | 1 |
keratocyte | 1.07e-13 | 2 |
migratory cranial neural crest cell | 1.07e-13 | 2 |
fibroblast | 7.54e-12 | 76 |
visceral preadipocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.43e-14 | 2 |