FFCP PHASE1:Mm9::chr17:88045479..88045492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=358 | |MCL_coexpression_id=358 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:88045479..88045492,+ | |||
|description=CAGE_peak_at_chr17:88045479..88045492,+ | |description=CAGE_peak_at_chr17:88045479..88045492,+ | ||
|id=chr17:88045479..88045492,+ | |id=chr17:88045479..88045492,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.11e-09!9;CL:0002251!5.11e-09!9;CL:0002076!1.79e-08!15;CL:0000066!2.05e-08!25;CL:0000075!7.78e-07!7 | |ontology_enrichment_celltype=CL:0002563!5.11e-09!9;CL:0002251!5.11e-09!9;CL:0002076!1.79e-08!15;CL:0000066!2.05e-08!25;CL:0000075!7.78e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.18e-20,15;CL:0002563,1.53e-19,9;CL:0002251,1.53e-19,9;CL:0000066,4.24e-18,25;CL:0000223,1.53e-14,20;CL:0000239,2.19e-13,6;CL:0000677,2.19e-13,6;CL:0000584,2.19e-13,6;CL:0000075,2.18e-11,7;CL:0000682,6.41e-08,3;CL:0000068,7.16e-08,3;CL:0002202,7.16e-08,3;CL:0000069,7.16e-08,3;CL:0002632,7.16e-08,3;CL:0002368,7.16e-08,3;CL:0000307,7.16e-08,3;CL:0000377,7.16e-08,3;CL:0002250,9.94e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.55e-22!59;UBERON:0000160!1.78e-22!43;UBERON:0000344!5.86e-15!15;UBERON:0001242!8.49e-13!13;UBERON:0000060!8.49e-13!13;UBERON:0001262!8.49e-13!13;UBERON:0004786!8.49e-13!13;UBERON:0001007!3.70e-11!128;UBERON:0001555!3.70e-11!128;UBERON:0007026!3.70e-11!128;UBERON:0004119!1.05e-10!130;UBERON:0000925!1.05e-10!130;UBERON:0006595!1.05e-10!130;UBERON:0000485!6.21e-10!11;UBERON:0004921!6.27e-10!126;UBERON:0004185!6.27e-10!126;UBERON:0004923!2.37e-09!24;UBERON:0003350!5.11e-09!9;UBERON:0004808!5.11e-09!9;UBERON:0001277!5.11e-09!9 | |ontology_enrichment_uberon=UBERON:0005409!1.55e-22!59;UBERON:0000160!1.78e-22!43;UBERON:0000344!5.86e-15!15;UBERON:0001242!8.49e-13!13;UBERON:0000060!8.49e-13!13;UBERON:0001262!8.49e-13!13;UBERON:0004786!8.49e-13!13;UBERON:0001007!3.70e-11!128;UBERON:0001555!3.70e-11!128;UBERON:0007026!3.70e-11!128;UBERON:0004119!1.05e-10!130;UBERON:0000925!1.05e-10!130;UBERON:0006595!1.05e-10!130;UBERON:0000485!6.21e-10!11;UBERON:0004921!6.27e-10!126;UBERON:0004185!6.27e-10!126;UBERON:0004923!2.37e-09!24;UBERON:0003350!5.11e-09!9;UBERON:0004808!5.11e-09!9;UBERON:0001277!5.11e-09!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.78e-38,31;UBERON:0000344,4.76e-30,15;UBERON:0005409,1.04e-25,47;UBERON:0001242,6.69e-25,13;UBERON:0001262,6.69e-25,13;UBERON:0004786,6.69e-25,13;UBERON:0003350,1.53e-19,9;UBERON:0004808,1.53e-19,9;UBERON:0001277,1.53e-19,9;UBERON:0004923,1.43e-17,24;UBERON:0000485,1.06e-15,11;UBERON:0001007,2.44e-13,116;UBERON:0001555,2.44e-13,116;UBERON:0007026,2.44e-13,116;UBERON:0004119,5.32e-13,118;UBERON:0000925,5.32e-13,118;UBERON:0006595,5.32e-13,118;UBERON:0002108,1.14e-11,4;UBERON:0004921,3.62e-11,114;UBERON:0000331,3.16e-09,3;UBERON:0002116,3.16e-09,3;UBERON:0001204,3.16e-09,3;UBERON:0001168,3.16e-09,3;UBERON:0003126,7.16e-08,3;UBERON:0001005,7.16e-08,3;UBERON:0007196,7.16e-08,3;UBERON:0001558,7.16e-08,3;UBERON:0001962,9.54e-07,2;UBERON:0001961,9.54e-07,2;UBERON:0001744,9.54e-07,2 | |||
|phase1_expression=0.480446541314382,1.74487703819681,1.36499771816861,1.51232105653415,1.00179145989269,1.00727563147134,3.03696432774183,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,8.31960598525715,8.25873411841812,1.14846392823004,2.58457197695445,2.58565479223067,17.1021077510736,7.81293402255785,5.32153225572731,0,0,0,2.59966457776147,1.32987716286794,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,1.73192832808971,2.28023878927589,1.51657333504435,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0.464473343720877,0.515469845288373,0.605050573870028,0.889512175379481,1.52180500890047,3.79623249235609,3.12928013975621,1.75934646160189,1.98956472041151,0.974820435595601,3.59527763461689,6.70027954611552,3.58454291857861,0,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,1.96705709207614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0.906970670894253,0,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,0.18006109403131,0.905510786479282,0.857348140126369,0.354680467284547,0.713475270408282,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,4.66369338607761,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,3.49960427887841,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0.810900861160657,1.02710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,1.74487703819681,1.36499771816861,1.51232105653415,1.00179145989269,1.00727563147134,3.03696432774183,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,8.31960598525715,8.25873411841812,1.14846392823004,2.58457197695445,2.58565479223067,17.1021077510736,7.81293402255785,5.32153225572731,0,0,0,2.59966457776147,1.32987716286794,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,1.73192832808971,2.28023878927589,1.51657333504435,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0.464473343720877,0.515469845288373,0.605050573870028,0.889512175379481,1.52180500890047,3.79623249235609,3.12928013975621,1.75934646160189,1.98956472041151,0.974820435595601,3.59527763461689,6.70027954611552,3.58454291857861,0,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,1.96705709207614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0.906970670894253,0,0,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,0.18006109403131,0.905510786479282,0.857348140126369,0.354680467284547,0.713475270408282,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0,4.66369338607761,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,3.49960427887841,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0.810900861160657,1.02710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:88045479..88045492,+ | |short_description=p@chr17:88045479..88045492,+ | ||
}} | }} |
Latest revision as of 11:33, 5 August 2015
Short description: | p@chr17:88045479..88045492, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88045479..88045492, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.18e-20 | 15 |
intestinal epithelial cell | 1.53e-19 | 9 |
epithelial cell of alimentary canal | 1.53e-19 | 9 |
epithelial cell | 4.24e-18 | 25 |
endodermal cell | 1.53e-14 | 20 |
brush border epithelial cell | 2.19e-13 | 6 |
gut absorptive cell | 2.19e-13 | 6 |
enterocyte | 2.19e-13 | 6 |
columnar/cuboidal epithelial cell | 2.18e-11 | 7 |
M cell of gut | 6.41e-08 | 3 |
duct epithelial cell | 7.16e-08 | 3 |
epithelial cell of tracheobronchial tree | 7.16e-08 | 3 |
branched duct epithelial cell | 7.16e-08 | 3 |
epithelial cell of lower respiratory tract | 7.16e-08 | 3 |
respiratory epithelial cell | 7.16e-08 | 3 |
tracheal epithelial cell | 7.16e-08 | 3 |
tracheoblast | 7.16e-08 | 3 |
intestinal crypt stem cell | 9.94e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.78e-38 | 31 |
mucosa | 4.76e-30 | 15 |
gastrointestinal system | 1.04e-25 | 47 |
intestinal mucosa | 6.69e-25 | 13 |
wall of intestine | 6.69e-25 | 13 |
gastrointestinal system mucosa | 6.69e-25 | 13 |
epithelium of mucosa | 1.53e-19 | 9 |
gastrointestinal system epithelium | 1.53e-19 | 9 |
intestinal epithelium | 1.53e-19 | 9 |
organ component layer | 1.43e-17 | 24 |
simple columnar epithelium | 1.06e-15 | 11 |
digestive system | 2.44e-13 | 116 |
digestive tract | 2.44e-13 | 116 |
primitive gut | 2.44e-13 | 116 |
endoderm-derived structure | 5.32e-13 | 118 |
endoderm | 5.32e-13 | 118 |
presumptive endoderm | 5.32e-13 | 118 |
small intestine | 1.14e-11 | 4 |
subdivision of digestive tract | 3.62e-11 | 114 |
ileal mucosa | 3.16e-09 | 3 |
ileum | 3.16e-09 | 3 |
mucosa of small intestine | 3.16e-09 | 3 |
wall of small intestine | 3.16e-09 | 3 |
trachea | 7.16e-08 | 3 |
respiratory airway | 7.16e-08 | 3 |
tracheobronchial tree | 7.16e-08 | 3 |
lower respiratory tract | 7.16e-08 | 3 |
gut-associated lymphoid tissue | 9.54e-07 | 2 |
mucosa-associated lymphoid tissue | 9.54e-07 | 2 |
lymphoid tissue | 9.54e-07 | 2 |