FFCP PHASE1:Hg19::chr17:72428185..72428199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55890 | |EntrezGene=55890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13309 | |HGNC=13309 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXI0 | |UniProt=Q9NXI0 | ||
|association_with_transcript=-55bp_to_ENST00000262616_5end | |association_with_transcript=-55bp_to_ENST00000262616_5end | ||
|cluster_id=chr17:72428185..72428199,+ | |||
|coexpression_cluster_id=C2434 | |||
|description=CAGE_peak_4_at_GPRC5C_5end | |description=CAGE_peak_4_at_GPRC5C_5end | ||
|id=chr17:72428185..72428199,+ | |id=chr17:72428185..72428199,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.48e-19!254;CL:1000497!1.91e-09!18;CL:0002518!1.91e-09!18;CL:1000449!4.76e-08!16;CL:0000223!9.79e-08!59;CL:0000181!1.13e-07!12;CL:0000417!1.13e-07!12;CL:0000668!1.13e-07!12;CL:0000414!1.13e-07!12;CL:0000412!1.13e-07!12;CL:0000182!1.13e-07!12;CL:1000507!6.04e-07!12;CL:1000494!6.04e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.48e-19!254;CL:1000497!1.91e-09!18;CL:0002518!1.91e-09!18;CL:1000449!4.76e-08!16;CL:0000223!9.79e-08!59;CL:0000181!1.13e-07!12;CL:0000417!1.13e-07!12;CL:0000668!1.13e-07!12;CL:0000414!1.13e-07!12;CL:0000412!1.13e-07!12;CL:0000182!1.13e-07!12;CL:1000507!6.04e-07!12;CL:1000494!6.04e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000497;9.14e-23;17!CL:0002518;9.14e-23;17!CL:1000449;1.80e-19;15!CL:1000507;1.04e-18;10!CL:1000494;1.04e-18;10!CL:0002681;3.16e-15;12!CL:0002584;3.16e-15;12!CL:0000182;5.14e-08;12!CL:0000239;4.16e-07;3!CL:1000615;4.16e-07;3!CL:0002306;4.16e-07;3!CL:1000746;8.47e-07;7!CL:1000612;8.47e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.24e-23,17;CL:0002518,2.24e-23,17;CL:1000449,4.43e-20,15;CL:1000507,5.20e-19,10;CL:1000494,5.20e-19,10;CL:0002681,1.62e-15,12;CL:0002584,1.62e-15,12;CL:0000066,2.68e-10,253;CL:0000182,3.19e-08,12;CL:0000239,4.35e-07,3;CL:1000615,4.35e-07,3;CL:0002306,4.35e-07,3;CL:1000746,4.66e-07,7;CL:1000612,4.66e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.41e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.29e-18!106;DOID:0050687!1.02e-14!143;DOID:162!1.07e-08!235;DOID:14566!1.17e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.72e-17!107;UBERON:0005172!2.56e-15!55;UBERON:0005173!2.56e-15!55;UBERON:0000466!3.81e-15!126;UBERON:0002417!1.60e-13!61;UBERON:0000916!1.60e-13!61;UBERON:0009569!8.70e-13!113;UBERON:0000481!9.08e-12!347;UBERON:0000489!1.37e-11!32;UBERON:0004921!5.18e-11!129;UBERON:0004185!5.18e-11!129;UBERON:0001041!9.18e-11!98;UBERON:0006554!3.79e-10!44;UBERON:0000464!4.30e-10!104;UBERON:0000058!4.80e-10!26;UBERON:0001048!1.13e-09!168;UBERON:0002113!1.17e-09!27;UBERON:0003918!1.17e-09!27;UBERON:0005095!1.17e-09!27;UBERON:0007687!1.17e-09!27;UBERON:0001008!1.23e-09!45;UBERON:0000077!1.67e-09!130;UBERON:0003887!2.80e-09!21;UBERON:0001007!2.91e-09!155;UBERON:0001555!2.91e-09!155;UBERON:0007026!2.91e-09!155;UBERON:0007023!4.83e-09!115;UBERON:0004119!5.38e-09!169;UBERON:0000925!5.38e-09!169;UBERON:0006595!5.38e-09!169;UBERON:0002553!7.17e-09!70;UBERON:0005911!1.12e-08!82;UBERON:0000080!1.20e-08!18;UBERON:0002120!1.20e-08!18;UBERON:0004875!1.20e-08!18;UBERON:0005721!1.20e-08!18;UBERON:0005754!1.20e-08!18;UBERON:0007297!1.20e-08!18;UBERON:0005743!1.43e-08!86;UBERON:0006555!1.54e-08!17;UBERON:0005103!1.54e-08!17;UBERON:0000083!1.54e-08!17;UBERON:0009201!1.54e-08!17;UBERON:0004819!1.54e-08!17;UBERON:0006553!1.54e-08!17;UBERON:0003074!1.54e-08!17;UBERON:0003060!1.54e-08!17;UBERON:0003886!2.69e-08!63;UBERON:0000477!3.06e-08!286;UBERON:0000062!3.81e-08!511;UBERON:0009856!3.85e-08!26;UBERON:0007499!4.34e-08!25;UBERON:0000025!4.55e-08!194;UBERON:0004211!4.76e-08!16;UBERON:0001285!4.76e-08!16;UBERON:0007684!4.76e-08!16;UBERON:0003220!4.76e-08!16;UBERON:0004208!4.76e-08!16;UBERON:0004876!5.02e-08!20;UBERON:0004111!1.44e-07!241;UBERON:0000922!1.62e-07!612;UBERON:0009497!2.86e-07!25;UBERON:0000015!2.86e-07!25;UBERON:0002423!2.86e-07!25;UBERON:0006235!2.86e-07!25;UBERON:0004161!2.86e-07!25;UBERON:0000073!3.14e-07!94;UBERON:0001016!3.14e-07!94;UBERON:0003064!3.33e-07!37;UBERON:0001049!3.46e-07!57;UBERON:0005068!3.46e-07!57;UBERON:0006241!3.46e-07!57;UBERON:0007135!3.46e-07!57;UBERON:0000475!3.89e-07!365;UBERON:0003076!4.27e-07!15;UBERON:0003057!4.27e-07!15;UBERON:0002346!5.09e-07!90;UBERON:0001017!5.41e-07!82;UBERON:0000353!5.94e-07!17;UBERON:0009773!6.04e-07!12;UBERON:0001231!6.04e-07!12;UBERON:0004810!6.04e-07!12;UBERON:0000483!6.45e-07!309;UBERON:0009854!8.29e-07!23;UBERON:0008835!9.54e-07!22;UBERON:0003894!9.54e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;1.30e-23;29!UBERON:0002113;5.26e-22;24!UBERON:0011143;5.26e-22;24!UBERON:0006555;1.80e-19;15!UBERON:0004819;1.80e-19;15!UBERON:0001285;1.80e-19;15!UBERON:0007684;1.80e-19;15!UBERON:0004211;1.04e-18;10!UBERON:0009773;1.04e-18;10!UBERON:0001231;1.04e-18;10!UBERON:0004810;1.04e-18;10!UBERON:0006554;2.09e-18;30!UBERON:0001008;2.09e-18;30!UBERON:0000353;2.04e-16;15!UBERON:0001225;3.16e-15;12!UBERON:0008987;3.16e-15;12!UBERON:0005172;3.54e-12;52!UBERON:0005173;3.54e-12;52!UBERON:0001851;1.20e-11;15!UBERON:0002417;1.11e-09;58!UBERON:0000916;1.11e-09;58!UBERON:0006853;4.16e-07;3!UBERON:0007685;4.16e-07;3!UBERON:0004134;4.16e-07;3!UBERON:0005177;5.27e-07;99!UBERON:0000074;8.47e-07;7!UBERON:0001229;8.47e-07;7 | |||
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| ||
|short_description=p4@GPRC5C | |short_description=p4@GPRC5C | ||
}} | }} |
Latest revision as of 07:30, 17 September 2015
Short description: | p4@GPRC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPRC5C_5end |
Coexpression cluster: | C2434_Renal_pancreas_Hepatocyte_Alveolar_gastric_kidney_nonsmall |
Association with transcript: | -55bp_to_ENST00000262616_5end |
EntrezGene: | GPRC5C |
HGNC: | 13309 |
UniProt: | Q9NXI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.24e-23 | 17 |
kidney epithelial cell | 2.24e-23 | 17 |
epithelial cell of nephron | 4.43e-20 | 15 |
kidney tubule cell | 5.20e-19 | 10 |
nephron tubule epithelial cell | 5.20e-19 | 10 |
kidney cortical cell | 1.62e-15 | 12 |
renal cortical epithelial cell | 1.62e-15 | 12 |
epithelial cell | 2.68e-10 | 253 |
hepatocyte | 3.19e-08 | 12 |
brush border epithelial cell | 4.35e-07 | 3 |
kidney cortex tubule cell | 4.35e-07 | 3 |
epithelial cell of proximal tubule | 4.35e-07 | 3 |
glomerular cell | 4.66e-07 | 7 |
kidney corpuscule cell | 4.66e-07 | 7 |