FFCP PHASE1:Hg19::chr6:30899924..30899954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389376 | |EntrezGene=389376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18386 | |HGNC=18386 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UW10 | |UniProt=Q6UW10 | ||
|association_with_transcript=0bp_to_ENST00000359086,NM_205854,uc003nsf.2_5end | |association_with_transcript=0bp_to_ENST00000359086,NM_205854,uc003nsf.2_5end | ||
|cluster_id=chr6:30899924..30899954,- | |||
|coexpression_cluster_id=C154 | |coexpression_cluster_id=C154 | ||
|description=CAGE_peak_1_at_SFTA2_5end | |description=CAGE_peak_1_at_SFTA2_5end | ||
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|ontology_enrichment_celltype=CL:0002076!1.52e-16!43;CL:1000507!1.61e-15!12;CL:1000494!1.61e-15!12;CL:1000449!5.06e-14!16;CL:1000497!3.29e-12!18;CL:0002518!3.29e-12!18;CL:0000223!6.66e-12!59;CL:0002681!1.31e-11!13;CL:0002584!1.31e-11!13;CL:0000066!7.69e-11!254;CL:0002251!5.25e-09!21;CL:0000239!1.01e-08!3;CL:1000615!1.01e-08!3;CL:0002306!1.01e-08!3;CL:0000349!9.20e-08!3;CL:0002577!9.20e-08!3 | |ontology_enrichment_celltype=CL:0002076!1.52e-16!43;CL:1000507!1.61e-15!12;CL:1000494!1.61e-15!12;CL:1000449!5.06e-14!16;CL:1000497!3.29e-12!18;CL:0002518!3.29e-12!18;CL:0000223!6.66e-12!59;CL:0002681!1.31e-11!13;CL:0002584!1.31e-11!13;CL:0000066!7.69e-11!254;CL:0002251!5.25e-09!21;CL:0000239!1.01e-08!3;CL:1000615!1.01e-08!3;CL:0002306!1.01e-08!3;CL:0000349!9.20e-08!3;CL:0002577!9.20e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:1000507;9.88e-21;10!CL:1000494;9.88e-21;10!CL:1000449;8.89e-18;15!CL:0002681;1.57e-17;12!CL:0002584;1.57e-17;12!CL:1000497;1.56e-15;17!CL:0002518;1.56e-15;17!CL:0000239;2.81e-14;3!CL:1000615;2.81e-14;3!CL:0002306;2.81e-14;3!CL:0002536;2.35e-09;2 | |ontology_enrichment_celltype_v019=CL:1000507;9.88e-21;10!CL:1000494;9.88e-21;10!CL:1000449;8.89e-18;15!CL:0002681;1.57e-17;12!CL:0002584;1.57e-17;12!CL:1000497;1.56e-15;17!CL:0002518;1.56e-15;17!CL:0000239;2.81e-14;3!CL:1000615;2.81e-14;3!CL:0002306;2.81e-14;3!CL:0002536;2.35e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,9.17e-21,10;CL:1000494,9.17e-21,10;CL:1000449,8.41e-18,15;CL:0002681,1.61e-17,12;CL:0002584,1.61e-17,12;CL:1000497,1.48e-15,17;CL:0002518,1.48e-15,17;CL:0000239,3.29e-14,3;CL:1000615,3.29e-14,3;CL:0002306,3.29e-14,3;CL:0002536,2.35e-09,2;CL:0000066,4.34e-08,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!7.03e-10!25 | |ontology_enrichment_disease=DOID:299!7.03e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:299;3.58e-10;25 | |ontology_enrichment_disease_v019=DOID:299;3.58e-10;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,3.46e-10,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;9.88e-21;10!UBERON:0009773;9.88e-21;10!UBERON:0001231;9.88e-21;10!UBERON:0004810;9.88e-21;10!UBERON:0006555;8.89e-18;15!UBERON:0004819;8.89e-18;15!UBERON:0001285;8.89e-18;15!UBERON:0007684;8.89e-18;15!UBERON:0001225;1.57e-17;12!UBERON:0008987;1.57e-17;12!UBERON:0002294;4.26e-16;7!UBERON:0001173;4.26e-16;7!UBERON:0006853;2.81e-14;3!UBERON:0007685;2.81e-14;3!UBERON:0004134;2.81e-14;3!UBERON:0001851;7.88e-14;15!UBERON:0000353;7.88e-14;15!UBERON:0002113;2.57e-13;24!UBERON:0011143;2.57e-13;24!UBERON:0006554;1.07e-12;30!UBERON:0001008;1.07e-12;30!UBERON:0002394;6.20e-11;4!UBERON:0003928;6.20e-11;4!UBERON:0000489;9.56e-11;29!UBERON:0002110;6.66e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004211;9.88e-21;10!UBERON:0009773;9.88e-21;10!UBERON:0001231;9.88e-21;10!UBERON:0004810;9.88e-21;10!UBERON:0006555;8.89e-18;15!UBERON:0004819;8.89e-18;15!UBERON:0001285;8.89e-18;15!UBERON:0007684;8.89e-18;15!UBERON:0001225;1.57e-17;12!UBERON:0008987;1.57e-17;12!UBERON:0002294;4.26e-16;7!UBERON:0001173;4.26e-16;7!UBERON:0006853;2.81e-14;3!UBERON:0007685;2.81e-14;3!UBERON:0004134;2.81e-14;3!UBERON:0001851;7.88e-14;15!UBERON:0000353;7.88e-14;15!UBERON:0002113;2.57e-13;24!UBERON:0011143;2.57e-13;24!UBERON:0006554;1.07e-12;30!UBERON:0001008;1.07e-12;30!UBERON:0002394;6.20e-11;4!UBERON:0003928;6.20e-11;4!UBERON:0000489;9.56e-11;29!UBERON:0002110;6.66e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,9.17e-21,10;UBERON:0004211,8.41e-18,15;UBERON:0009773,8.41e-18,15;UBERON:0001231,8.41e-18,15;UBERON:0001285,8.41e-18,15;UBERON:0007684,8.41e-18,15;UBERON:0004208,8.41e-18,15;UBERON:0001225,1.61e-17,12;UBERON:0008987,1.61e-17,12;UBERON:0006555,1.31e-16,16;UBERON:0004819,1.31e-16,16;UBERON:0006853,3.29e-14,3;UBERON:0007685,3.29e-14,3;UBERON:0004134,3.29e-14,3;UBERON:0001851,8.04e-14,15;UBERON:0000353,8.04e-14,15;UBERON:0002294,1.70e-12,9;UBERON:0001173,1.70e-12,9;UBERON:0004912,1.70e-12,9;UBERON:0002113,3.56e-12,26;UBERON:0003918,3.56e-12,26;UBERON:0011143,3.56e-12,26;UBERON:0005095,3.56e-12,26;UBERON:0007687,3.56e-12,26;UBERON:0006554,6.25e-11,47;UBERON:0001008,1.19e-10,48;UBERON:0000489,5.90e-10,31;UBERON:0004119,3.56e-09,160;UBERON:0000925,3.56e-09,160;UBERON:0006595,3.56e-09,160;UBERON:0005177,6.67e-09,101;UBERON:0005172,1.05e-07,54;UBERON:0005173,1.05e-07,54;UBERON:0009569,1.15e-07,112;UBERON:0005911,1.15e-07,82;UBERON:0002394,1.84e-07,6;UBERON:0003928,1.84e-07,6;UBERON:0002110,6.76e-07,3;UBERON:0006242,6.76e-07,3;UBERON:0002417,9.93e-07,60;UBERON:0000916,9.93e-07,60 | |||
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| ||
|short_description=p1@SFTA2 | |short_description=p1@SFTA2 | ||
}} | }} |
Latest revision as of 19:29, 17 September 2015
Short description: | p1@SFTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFTA2_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000359086, NM_205854, uc003nsf.2_5end |
EntrezGene: | SFTA2 |
HGNC: | 18386 |
UniProt: | Q6UW10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 9.17e-21 | 10 |
nephron tubule epithelial cell | 9.17e-21 | 10 |
epithelial cell of nephron | 8.41e-18 | 15 |
kidney cortical cell | 1.61e-17 | 12 |
renal cortical epithelial cell | 1.61e-17 | 12 |
kidney cell | 1.48e-15 | 17 |
kidney epithelial cell | 1.48e-15 | 17 |
brush border epithelial cell | 3.29e-14 | 3 |
kidney cortex tubule cell | 3.29e-14 | 3 |
epithelial cell of proximal tubule | 3.29e-14 | 3 |
amniotic epithelial cell | 2.35e-09 | 2 |
epithelial cell | 4.34e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.46e-10 | 25 |