FFCP PHASE1:Hg19::chr6:41604725..41604741,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6967 | |||
|TSSclassifier=strong | |||
|UniProt=B1AKB7 | |||
|association_with_transcript=-28bp_to_ENST00000419164_5end | |||
|cluster_id=chr6:41604725..41604741,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_4_at_MDFI_5end | |||
|id=chr6:41604725..41604741,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.06e-34!254;CL:0002076!9.85e-21!43;CL:0000223!1.41e-15!59;CL:0002368!2.72e-14!13;CL:0002202!6.47e-10!9;CL:0002632!6.47e-10!9;CL:0002159!6.97e-10!13;CL:0002251!1.79e-09!21;CL:0000076!5.48e-07!62;CL:0002077!8.37e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.59e-22;13!CL:0002076;3.33e-21;42!CL:0002159;2.69e-16;14!CL:0000349;1.87e-15;19!CL:0002202;7.14e-14;9!CL:0002632;7.14e-14;9!CL:0002251;4.37e-12;20!CL:0000244;6.95e-11;4!CL:0000731;6.95e-11;4!CL:0002577;1.96e-09;3!CL:0002328;3.96e-09;3!CL:0000307;5.50e-09;3!CL:0002541;1.46e-08;3!CL:0000039;3.01e-08;7!CL:0000586;3.01e-08;7!CL:0002621;6.02e-08;3!CL:0002166;1.41e-07;3!CL:0000240;3.08e-07;6!CL:0000311;3.08e-07;6!CL:0000079;3.08e-07;6!CL:0000237;3.08e-07;6!CL:0000362;3.17e-07;9!CL:0002077;4.04e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.17e-28,253;CL:0002076,1.99e-27,42;CL:0002368,9.68e-22,13;CL:0000223,1.20e-19,58;CL:0002159,2.34e-16,14;CL:0000349,1.66e-15,19;CL:0002202,7.16e-14,9;CL:0002632,7.16e-14,9;CL:0002251,4.08e-12,20;CL:0000244,6.96e-11,4;CL:0000731,6.96e-11,4;CL:0002577,2.02e-09,3;CL:0002328,3.82e-09,3;CL:0000068,5.51e-09,3;CL:0000069,5.51e-09,3;CL:0000307,5.51e-09,3;CL:0000377,5.51e-09,3;CL:0002541,1.32e-08,3;CL:0000039,2.32e-08,7;CL:0000586,2.32e-08,7;CL:0002077,3.76e-08,34;CL:0002621,6.81e-08,3;CL:0002166,1.05e-07,3;CL:0000240,3.11e-07,6;CL:0000311,3.11e-07,6;CL:0000079,3.11e-07,6;CL:0000237,3.11e-07,6;CL:0000036,3.11e-07,6;CL:0000357,3.11e-07,6;CL:0000114,3.11e-07,6;CL:0000362,3.37e-07,9;CL:0000076,5.43e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;7.94e-11;58!CL:0000377;5.50e-09;3!CL:0000357;3.08e-07;6!CL:0000114;3.08e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.94e-11!14;DOID:305!3.03e-11!106;DOID:0050687!3.73e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.14e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.05e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.48e-14!14;UBERON:0000158!2.48e-14!14;UBERON:0004119!6.73e-12!169;UBERON:0000925!6.73e-12!169;UBERON:0006595!6.73e-12!169;UBERON:0003124!1.48e-10!7;UBERON:0001004!2.73e-09!72;UBERON:0000161!7.64e-08!35;UBERON:0006554!8.95e-08!44;UBERON:0000365!1.63e-07!5;UBERON:0000464!1.69e-07!104;UBERON:0001008!1.79e-07!45;UBERON:0000064!1.82e-07!219;UBERON:0000466!2.12e-07!126;UBERON:0000077!2.13e-07!130;UBERON:0007196!5.45e-07!14;UBERON:0001558!5.45e-07!14;UBERON:0005911!7.27e-07!82;UBERON:0000478!8.71e-07!24;UBERON:0000065!8.86e-07!53;UBERON:0001987!9.17e-07!4;UBERON:0004340!9.17e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.68e-16;10!UBERON:0000158;1.68e-16;10!UBERON:0000478;1.17e-11;24!UBERON:0000305;5.46e-10;7!UBERON:0000486;1.66e-09;12!UBERON:0004815;3.96e-09;3!UBERON:0002031;3.96e-09;3!UBERON:0000365;1.08e-08;5!UBERON:0003124;1.46e-08;3!UBERON:0000920;1.46e-08;3!UBERON:0003729;5.83e-08;13!UBERON:0001949;6.02e-08;3!UBERON:0007196;7.89e-08;15!UBERON:0001558;7.89e-08;15!UBERON:0004807;1.33e-07;22!UBERON:0005911;1.97e-07;36!UBERON:0005910;3.16e-07;6!UBERON:0001987;3.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.61e-22,14;UBERON:0000158,4.61e-22,14;UBERON:0003124,7.37e-14,7;UBERON:0000478,1.07e-11,24;UBERON:0004119,4.03e-11,160;UBERON:0000925,4.03e-11,160;UBERON:0006595,4.03e-11,160;UBERON:0000305,4.95e-10,7;UBERON:0004923,3.77e-09,66;UBERON:0004815,3.82e-09,3;UBERON:0002031,3.82e-09,3;UBERON:0004871,1.04e-08,8;UBERON:0000365,1.08e-08,5;UBERON:0000920,1.32e-08,3;UBERON:0001004,5.28e-08,74;UBERON:0003729,5.68e-08,13;UBERON:0001949,6.81e-08,3;UBERON:0007196,7.91e-08,15;UBERON:0001558,7.91e-08,15;UBERON:0005910,3.16e-07,6;UBERON:0001987,3.99e-07,4;UBERON:0004340,3.99e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,5.58240934377942,5.89791704751465,6.06664049925443,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0,0,0,0,0,0,0,0.464448369948228,8.27479102031034,8.433765725791,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0.443458794925128,0,0,6.55731518926576,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,2.72746120590835,2.00763216772303,0.243947412259191,0.265059536642971,0.348581828608555,0.414644220061482,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,3.84125998930189,6.74410519545717,4.2222168412885,4.44424536760942,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,2.85569617938061,2.26840155587818,3.94057499892532,4.65014301622339,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,11.2157201435116,16.6435439510497,11.4908311465279,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21316822788541,2.20994373446151,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,3.3243040357149,0.671624264166535,0,0,0.512900250232778,0.328014645699706,0,0.412164046590889,1.64825036673018,1.32015199872941,5.16838984196555,5.20048196829217,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,2.64455864577565,2.69066094311149,3.31793052485919,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,4.61866141082458,8.04362730642945,7.62236894029258,0.376575203107117,4.3050537267123,5.05414427002877,7.53831261012349,2.75668080248351,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,11.4597352674091,8.61197574414652,11.6721066797708,0,0,0,0,0,0,0,0,1.02268682502155,0,0,0.808815160325942,2.14825409610731,0,0.295930216910801,0,0,0,0,0,0,0,0,3.18621655199399,0.508507300585533,4.01859059005492,0,0,0,0,0.120596438625408,0,0,0,0,0,2.23077990845765,0.307801034015188,0,0,2.51321404347362,0,6.06102203490647,2.74792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,4.70363507589013,2.00236175134926,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0,0,2.34661659281764,0.0801588202515337,0,0,3.60226042885265,0,0,0.576219191952599,0.124252535565433,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,2.99518500748487,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,0.83088067605837,0,0,0,2.68347750079413,0,0.104909176269996,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,1.62474530350739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,4.89578277018056,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,1.65157612686837,0.550285795565037,1.15525666150338,0,0,1.5913297769302,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.175871244359621,2.04419884223352,0,0,0,0,0.975726071789027,0,0.171488009437418,0,0,0.472775363535873,0.556157009460346,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0.62164849248911,0.51215543128185,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.894843454382338,1.76670420507437,0.365753774946808,0,0,0,0.485710993059139,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.892769693028288,0,0.481448200135009,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,1.93778776509765,4.27547848424897,2.94063678511504,1.50424523575425,0,0,0,0,1.0661699095049,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,1.02669990325584,0.673520530145875,0.573777643141411,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MDFI | |||
}} |
Latest revision as of 18:45, 18 September 2015
Short description: | p4@MDFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MDFI_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | -28bp_to_ENST00000419164_5end |
EntrezGene: | MDFI |
HGNC: | 6967 |
UniProt: | B1AKB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.61e-22 | 14 |
membranous layer | 4.61e-22 | 14 |
chorion | 7.37e-14 | 7 |
extraembryonic structure | 1.07e-11 | 24 |
endoderm-derived structure | 4.03e-11 | 160 |
endoderm | 4.03e-11 | 160 |
presumptive endoderm | 4.03e-11 | 160 |
amnion | 4.95e-10 | 7 |
organ component layer | 3.77e-09 | 66 |
lower respiratory tract epithelium | 3.82e-09 | 3 |
epithelium of bronchus | 3.82e-09 | 3 |
somatic layer of lateral plate mesoderm | 1.04e-08 | 8 |
urothelium | 1.08e-08 | 5 |
egg chorion | 1.32e-08 | 3 |
respiratory system | 5.28e-08 | 74 |
mouth mucosa | 5.68e-08 | 13 |
gingival epithelium | 6.81e-08 | 3 |
tracheobronchial tree | 7.91e-08 | 15 |
lower respiratory tract | 7.91e-08 | 15 |
transitional epithelium | 3.16e-07 | 6 |
placenta | 3.99e-07 | 4 |
allantois | 3.99e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.05e-11 | 14 |