FFCP PHASE1:Hg19::chr6:41604725..41604741,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:41604725..41604741,+ to FFCP PHASE1:Hg19::chr6:41604725..41604741,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4188 | |EntrezGene=4188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6967 | |HGNC=6967 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKB7 | |UniProt=B1AKB7 | ||
|association_with_transcript=-28bp_to_ENST00000419164_5end | |||
|cluster_id=chr6:41604725..41604741,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_4_at_MDFI_5end | |||
|id=chr6:41604725..41604741,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.06e-34!254;CL:0002076!9.85e-21!43;CL:0000223!1.41e-15!59;CL:0002368!2.72e-14!13;CL:0002202!6.47e-10!9;CL:0002632!6.47e-10!9;CL:0002159!6.97e-10!13;CL:0002251!1.79e-09!21;CL:0000076!5.48e-07!62;CL:0002077!8.37e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.59e-22;13!CL:0002076;3.33e-21;42!CL:0002159;2.69e-16;14!CL:0000349;1.87e-15;19!CL:0002202;7.14e-14;9!CL:0002632;7.14e-14;9!CL:0002251;4.37e-12;20!CL:0000244;6.95e-11;4!CL:0000731;6.95e-11;4!CL:0002577;1.96e-09;3!CL:0002328;3.96e-09;3!CL:0000307;5.50e-09;3!CL:0002541;1.46e-08;3!CL:0000039;3.01e-08;7!CL:0000586;3.01e-08;7!CL:0002621;6.02e-08;3!CL:0002166;1.41e-07;3!CL:0000240;3.08e-07;6!CL:0000311;3.08e-07;6!CL:0000079;3.08e-07;6!CL:0000237;3.08e-07;6!CL:0000362;3.17e-07;9!CL:0002077;4.04e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.17e-28,253;CL:0002076,1.99e-27,42;CL:0002368,9.68e-22,13;CL:0000223,1.20e-19,58;CL:0002159,2.34e-16,14;CL:0000349,1.66e-15,19;CL:0002202,7.16e-14,9;CL:0002632,7.16e-14,9;CL:0002251,4.08e-12,20;CL:0000244,6.96e-11,4;CL:0000731,6.96e-11,4;CL:0002577,2.02e-09,3;CL:0002328,3.82e-09,3;CL:0000068,5.51e-09,3;CL:0000069,5.51e-09,3;CL:0000307,5.51e-09,3;CL:0000377,5.51e-09,3;CL:0002541,1.32e-08,3;CL:0000039,2.32e-08,7;CL:0000586,2.32e-08,7;CL:0002077,3.76e-08,34;CL:0002621,6.81e-08,3;CL:0002166,1.05e-07,3;CL:0000240,3.11e-07,6;CL:0000311,3.11e-07,6;CL:0000079,3.11e-07,6;CL:0000237,3.11e-07,6;CL:0000036,3.11e-07,6;CL:0000357,3.11e-07,6;CL:0000114,3.11e-07,6;CL:0000362,3.37e-07,9;CL:0000076,5.43e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;7.94e-11;58!CL:0000377;5.50e-09;3!CL:0000357;3.08e-07;6!CL:0000114;3.08e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.94e-11!14;DOID:305!3.03e-11!106;DOID:0050687!3.73e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.14e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.05e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.48e-14!14;UBERON:0000158!2.48e-14!14;UBERON:0004119!6.73e-12!169;UBERON:0000925!6.73e-12!169;UBERON:0006595!6.73e-12!169;UBERON:0003124!1.48e-10!7;UBERON:0001004!2.73e-09!72;UBERON:0000161!7.64e-08!35;UBERON:0006554!8.95e-08!44;UBERON:0000365!1.63e-07!5;UBERON:0000464!1.69e-07!104;UBERON:0001008!1.79e-07!45;UBERON:0000064!1.82e-07!219;UBERON:0000466!2.12e-07!126;UBERON:0000077!2.13e-07!130;UBERON:0007196!5.45e-07!14;UBERON:0001558!5.45e-07!14;UBERON:0005911!7.27e-07!82;UBERON:0000478!8.71e-07!24;UBERON:0000065!8.86e-07!53;UBERON:0001987!9.17e-07!4;UBERON:0004340!9.17e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.68e-16;10!UBERON:0000158;1.68e-16;10!UBERON:0000478;1.17e-11;24!UBERON:0000305;5.46e-10;7!UBERON:0000486;1.66e-09;12!UBERON:0004815;3.96e-09;3!UBERON:0002031;3.96e-09;3!UBERON:0000365;1.08e-08;5!UBERON:0003124;1.46e-08;3!UBERON:0000920;1.46e-08;3!UBERON:0003729;5.83e-08;13!UBERON:0001949;6.02e-08;3!UBERON:0007196;7.89e-08;15!UBERON:0001558;7.89e-08;15!UBERON:0004807;1.33e-07;22!UBERON:0005911;1.97e-07;36!UBERON:0005910;3.16e-07;6!UBERON:0001987;3.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.61e-22,14;UBERON:0000158,4.61e-22,14;UBERON:0003124,7.37e-14,7;UBERON:0000478,1.07e-11,24;UBERON:0004119,4.03e-11,160;UBERON:0000925,4.03e-11,160;UBERON:0006595,4.03e-11,160;UBERON:0000305,4.95e-10,7;UBERON:0004923,3.77e-09,66;UBERON:0004815,3.82e-09,3;UBERON:0002031,3.82e-09,3;UBERON:0004871,1.04e-08,8;UBERON:0000365,1.08e-08,5;UBERON:0000920,1.32e-08,3;UBERON:0001004,5.28e-08,74;UBERON:0003729,5.68e-08,13;UBERON:0001949,6.81e-08,3;UBERON:0007196,7.91e-08,15;UBERON:0001558,7.91e-08,15;UBERON:0005910,3.16e-07,6;UBERON:0001987,3.99e-07,4;UBERON:0004340,3.99e-07,4 | |||
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| ||
|short_description=p4@MDFI | |||
}} | }} |
Latest revision as of 18:45, 18 September 2015
Short description: | p4@MDFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MDFI_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | -28bp_to_ENST00000419164_5end |
EntrezGene: | MDFI |
HGNC: | 6967 |
UniProt: | B1AKB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.61e-22 | 14 |
membranous layer | 4.61e-22 | 14 |
chorion | 7.37e-14 | 7 |
extraembryonic structure | 1.07e-11 | 24 |
endoderm-derived structure | 4.03e-11 | 160 |
endoderm | 4.03e-11 | 160 |
presumptive endoderm | 4.03e-11 | 160 |
amnion | 4.95e-10 | 7 |
organ component layer | 3.77e-09 | 66 |
lower respiratory tract epithelium | 3.82e-09 | 3 |
epithelium of bronchus | 3.82e-09 | 3 |
somatic layer of lateral plate mesoderm | 1.04e-08 | 8 |
urothelium | 1.08e-08 | 5 |
egg chorion | 1.32e-08 | 3 |
respiratory system | 5.28e-08 | 74 |
mouth mucosa | 5.68e-08 | 13 |
gingival epithelium | 6.81e-08 | 3 |
tracheobronchial tree | 7.91e-08 | 15 |
lower respiratory tract | 7.91e-08 | 15 |
transitional epithelium | 3.16e-07 | 6 |
placenta | 3.99e-07 | 4 |
allantois | 3.99e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.05e-11 | 14 |