FFCP PHASE1:Hg19::chr1:183538369..183538387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALB7,B1ALB6 | |UniProt=B1ALB7,B1ALB6 | ||
|association_with_transcript=-9bp_to_ENST00000419402,ENST00000420553_5end | |association_with_transcript=-9bp_to_ENST00000419402,ENST00000420553_5end | ||
|cluster_id=chr1:183538369..183538387,- | |||
|coexpression_cluster_id=C3913 | |||
|description=CAGE_peak_12_at_NCF2_5end | |description=CAGE_peak_12_at_NCF2_5end | ||
|id=chr1:183538369..183538387,- | |id=chr1:183538369..183538387,- | ||
|ontology_enrichment_celltype=CL:0000066!2.01e-21!254;CL:0002368!1.33e-19!13;CL:0002076!4.48e-18!43;CL:0002202!6.00e-12!9;CL:0002632!6.00e-12!9;CL:0000223!1.87e-11!59;CL:0002328!6.81e-08!3;CL:0000068!8.29e-08!3;CL:0000069!8.29e-08!3;CL:0000307!8.29e-08!3;CL:0000377!8.29e-08!3;CL:0002166!1.45e-07!3;CL:0000349!3.81e-07!3;CL:0002577!3.81e-07!3;CL:0002621!4.31e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.01e-21!254;CL:0002368!1.33e-19!13;CL:0002076!4.48e-18!43;CL:0002202!6.00e-12!9;CL:0002632!6.00e-12!9;CL:0000223!1.87e-11!59;CL:0002328!6.81e-08!3;CL:0000068!8.29e-08!3;CL:0000069!8.29e-08!3;CL:0000307!8.29e-08!3;CL:0000377!8.29e-08!3;CL:0002166!1.45e-07!3;CL:0000349!3.81e-07!3;CL:0002577!3.81e-07!3;CL:0002621!4.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.06e-42;13!CL:0002202;6.13e-28;9!CL:0002632;6.13e-28;9!CL:0002328;4.51e-22;3!CL:0000307;7.66e-22;3!CL:0002076;1.26e-15;42!CL:0002536;2.22e-14;2!CL:0002166;3.34e-10;3!CL:0002621;6.81e-10;3!CL:0000082;3.42e-09;19!CL:0000319;9.79e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.11e-42,13;CL:0002202,5.73e-28,9;CL:0002632,5.73e-28,9;CL:0002328,4.06e-22,3;CL:0000068,7.67e-22,3;CL:0000069,7.67e-22,3;CL:0000307,7.67e-22,3;CL:0000377,7.67e-22,3;CL:0002076,9.58e-22,42;CL:0000066,2.03e-15,253;CL:0000223,3.89e-15,58;CL:0002536,1.37e-14,2;CL:0002166,2.84e-10,3;CL:0002621,6.51e-10,3;CL:0000082,3.30e-09,19;CL:0000319,9.79e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000377;7.66e-22;3!CL:0000223;7.47e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;9.79e-09;1!DOID:3111;4.89e-08;1!DOID:3603;4.89e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.79e-09,1;DOID:3111,3.33e-08,1;DOID:3603,3.33e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.11e-12!169;UBERON:0000925!5.11e-12!169;UBERON:0006595!5.11e-12!169;UBERON:0005911!7.75e-11!82;UBERON:0001004!2.99e-10!72;UBERON:0005178!5.32e-09!34;UBERON:0002224!5.32e-09!34;UBERON:0007196!6.16e-09!14;UBERON:0001558!6.16e-09!14;UBERON:0005181!1.21e-08!35;UBERON:0000065!1.93e-08!53;UBERON:0005910!3.67e-08!6;UBERON:0000464!5.52e-08!104;UBERON:0004815!6.81e-08!3;UBERON:0002031!6.81e-08!3;UBERON:0005153!1.43e-07!37;UBERON:0008947!1.49e-07!38;UBERON:0003258!1.49e-07!38;UBERON:0000466!2.33e-07!126;UBERON:0001949!4.31e-07!3;UBERON:0004807!5.39e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.51e-22;3!UBERON:0002031;4.51e-22;3!UBERON:0007196;1.41e-16;15!UBERON:0001558;1.41e-16;15!UBERON:0004807;9.44e-15;22!UBERON:0002185;1.79e-13;5!UBERON:0000065;5.43e-12;44!UBERON:0005178;7.99e-12;34!UBERON:0002224;7.99e-12;34!UBERON:0005181;7.18e-11;35!UBERON:0000072;4.46e-10;37!UBERON:0001949;6.81e-10;3!UBERON:0000485;9.15e-10;7!UBERON:0003126;1.14e-09;7!UBERON:0001005;1.14e-09;7!UBERON:0005911;1.30e-09;36!UBERON:0004802;3.42e-09;19!UBERON:0000115;3.42e-09;19!UBERON:0002048;6.61e-08;22!UBERON:0000117;6.61e-08;22!UBERON:0000171;6.61e-08;22!UBERON:0000170;6.61e-08;22!UBERON:0001708;7.31e-08;4!UBERON:0008895;7.31e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.06e-22,3;UBERON:0002031,4.06e-22,3;UBERON:0007196,1.35e-16,15;UBERON:0001558,1.35e-16,15;UBERON:0000065,7.14e-14,54;UBERON:0001004,1.56e-13,74;UBERON:0002185,1.69e-13,5;UBERON:0005178,3.15e-12,34;UBERON:0002224,3.15e-12,34;UBERON:0005181,7.60e-12,35;UBERON:0004807,1.95e-11,28;UBERON:0008947,8.06e-11,38;UBERON:0003258,8.06e-11,38;UBERON:0004119,1.47e-10,160;UBERON:0000925,1.47e-10,160;UBERON:0006595,1.47e-10,160;UBERON:0001949,6.51e-10,3;UBERON:0003126,1.14e-09,7;UBERON:0001005,1.14e-09,7;UBERON:0004802,3.30e-09,19;UBERON:0000115,3.30e-09,19;UBERON:0000072,1.58e-08,47;UBERON:0005911,2.41e-08,82;UBERON:0002048,6.42e-08,22;UBERON:0000117,6.42e-08,22;UBERON:0000171,6.42e-08,22;UBERON:0000170,6.42e-08,22;UBERON:0005597,6.42e-08,22;UBERON:0000118,6.42e-08,22;UBERON:0001708,6.48e-08,4;UBERON:0008895,6.48e-08,4;UBERON:0000485,1.04e-07,9;UBERON:0000915,1.34e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,1.52908960491121,1.84636884759917,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,6.024118375565,3.69754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.35282597214308,1.63647672354501,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,3.74935335947108,1.51183915378974,0.992425680696705,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.606255142892519,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.184161977871793,0,0,0.262248829918848,0.451199612907412,1.30926073077505,0.784349769176855,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,2.97512847649761,3.0750410778417,0.765676274967505,3.0347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,2.88666338176536,2.68120910214315,5.44454924306613,0,0.43050537267123,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31368085507169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,1.30588809870604,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,3.68730573157055,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,3.45447355175002,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,2.81926008926669,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,11.0597808939174,1.90180911022764,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,1.52552838186867,0,0,0,1.41193548092464,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,1.52908960491121,1.84636884759917,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,6.024118375565,3.69754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.35282597214308,1.63647672354501,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,3.74935335947108,1.51183915378974,0.992425680696705,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.606255142892519,3.32870879020994,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.184161977871793,0,0,0.262248829918848,0.451199612907412,1.30926073077505,0.784349769176855,0,0.73886140225013,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,2.97512847649761,3.0750410778417,0.765676274967505,3.0347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,2.88666338176536,2.68120910214315,5.44454924306613,0,0.43050537267123,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31368085507169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,1.30588809870604,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0.195551382734803,3.68730573157055,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,3.45447355175002,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,2.81926008926669,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,11.0597808939174,1.90180911022764,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,1.52552838186867,0,0,0,1.41193548092464,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p12@NCF2 | |short_description=p12@NCF2 | ||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p12@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NCF2_5end |
Coexpression cluster: | C3913_gall_bile_Small_lung_Bronchial_Tracheal_large |
Association with transcript: | -9bp_to_ENST00000419402, ENST00000420553_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | B1ALB7B1ALB6 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.11e-42 | 13 |
epithelial cell of tracheobronchial tree | 5.73e-28 | 9 |
epithelial cell of lower respiratory tract | 5.73e-28 | 9 |
bronchial epithelial cell | 4.06e-22 | 3 |
duct epithelial cell | 7.67e-22 | 3 |
branched duct epithelial cell | 7.67e-22 | 3 |
tracheal epithelial cell | 7.67e-22 | 3 |
tracheoblast | 7.67e-22 | 3 |
endo-epithelial cell | 9.58e-22 | 42 |
epithelial cell | 2.03e-15 | 253 |
endodermal cell | 3.89e-15 | 58 |
amniotic epithelial cell | 1.37e-14 | 2 |
epithelial cell of Malassez | 2.84e-10 | 3 |
gingival epithelial cell | 6.51e-10 | 3 |
epithelial cell of lung | 3.30e-09 | 19 |
mucus secreting cell | 9.79e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.06e-22 | 3 |
epithelium of bronchus | 4.06e-22 | 3 |
tracheobronchial tree | 1.35e-16 | 15 |
lower respiratory tract | 1.35e-16 | 15 |
respiratory tract | 7.14e-14 | 54 |
respiratory system | 1.56e-13 | 74 |
bronchus | 1.69e-13 | 5 |
thoracic cavity element | 3.15e-12 | 34 |
thoracic cavity | 3.15e-12 | 34 |
thoracic segment organ | 7.60e-12 | 35 |
respiratory system epithelium | 1.95e-11 | 28 |
respiratory primordium | 8.06e-11 | 38 |
endoderm of foregut | 8.06e-11 | 38 |
endoderm-derived structure | 1.47e-10 | 160 |
endoderm | 1.47e-10 | 160 |
presumptive endoderm | 1.47e-10 | 160 |
gingival epithelium | 6.51e-10 | 3 |
trachea | 1.14e-09 | 7 |
respiratory airway | 1.14e-09 | 7 |
respiratory tract epithelium | 3.30e-09 | 19 |
lung epithelium | 3.30e-09 | 19 |
segment of respiratory tract | 1.58e-08 | 47 |
endo-epithelium | 2.41e-08 | 82 |
lung | 6.42e-08 | 22 |
respiratory tube | 6.42e-08 | 22 |
respiration organ | 6.42e-08 | 22 |
pair of lungs | 6.42e-08 | 22 |
lung primordium | 6.42e-08 | 22 |
lung bud | 6.42e-08 | 22 |
jaw skeleton | 6.48e-08 | 4 |
splanchnocranium | 6.48e-08 | 4 |
simple columnar epithelium | 1.04e-07 | 9 |
thoracic segment of trunk | 1.34e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.79e-09 | 1 |
cystadenocarcinoma | 3.33e-08 | 1 |
mucinous cystadenocarcinoma | 3.33e-08 | 1 |