FFCP PHASE1:Hg19::chr14:24779340..24779371,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:24779340..24779371,+ to FFCP PHASE1:Hg19::chr14:24779340..24779371,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56413 | |EntrezGene=56413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19260 | |HGNC=19260 | ||
|TSSclassifier=strong | |||
|UniProt=Q5KU28,B4E292,Q9NPC1 | |UniProt=Q5KU28,B4E292,Q9NPC1 | ||
|association_with_transcript=0bp_to_ENST00000533293,ENST00000543919,NM_001164692,NM_019839,uc001wor.2,uc010alo.2_5end | |||
|cluster_id=chr14:24779340..24779371,+ | |||
|coexpression_cluster_id=C3417 | |||
|description=CAGE_peak_1_at_LTB4R2_5end | |||
|id=chr14:24779340..24779371,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.12e-15!43;CL:0002159!1.42e-13!13;CL:0000223!7.66e-12!59;CL:0002368!4.09e-11!13;CL:0000622!3.25e-09!5;CL:0002251!2.54e-08!21;CL:0000154!1.56e-07!6;CL:0002077!3.72e-07!33;CL:0000362!6.53e-07!8;CL:0000244!8.99e-07!4;CL:0000731!8.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.09e-20;14!CL:0002368;6.42e-18;13!CL:0002076;2.32e-17;42!CL:0000622;8.78e-17;5!CL:0000154;6.48e-14;6!CL:0002202;3.47e-12;9!CL:0002632;3.47e-12;9!CL:0000244;6.36e-12;4!CL:0000731;6.36e-12;4!CL:0002251;1.38e-11;20!CL:0002623;5.20e-11;3!CL:0002077;1.75e-10;34!CL:0002328;2.96e-10;3!CL:0000307;4.04e-10;3!CL:0002621;6.49e-10;3!CL:0002166;1.20e-09;3!CL:0000150;3.99e-09;9!CL:0000240;1.21e-08;6!CL:0000311;1.21e-08;6!CL:0000079;1.21e-08;6!CL:0000237;1.21e-08;6!CL:0000362;1.39e-08;9!CL:0000575;6.91e-08;2!CL:0000317;1.78e-07;2!CL:1000448;1.78e-07;2!CL:0002308;1.78e-07;2!CL:0002140;1.78e-07;2!CL:0002327;6.34e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.04e-22,42;CL:0002159,1.21e-20,14;CL:0002368,6.10e-18,13;CL:0000622,8.78e-17,5;CL:0000223,7.81e-15,58;CL:0000154,6.49e-14,6;CL:0002077,2.59e-12,34;CL:0002202,3.47e-12,9;CL:0002632,3.47e-12,9;CL:0000244,6.09e-12,4;CL:0000731,6.09e-12,4;CL:0000066,1.04e-11,253;CL:0002251,1.37e-11,20;CL:0002623,5.11e-11,3;CL:0002328,2.92e-10,3;CL:0000068,4.10e-10,3;CL:0000069,4.10e-10,3;CL:0000307,4.10e-10,3;CL:0000377,4.10e-10,3;CL:0002621,6.49e-10,3;CL:0002166,1.26e-09,3;CL:0000150,3.99e-09,9;CL:0000240,1.29e-08,6;CL:0000311,1.29e-08,6;CL:0000079,1.29e-08,6;CL:0000237,1.29e-08,6;CL:0000036,1.29e-08,6;CL:0000357,1.29e-08,6;CL:0000114,1.29e-08,6;CL:0000362,1.47e-08,9;CL:0000575,6.91e-08,2;CL:0000317,1.81e-07,2;CL:1000448,1.81e-07,2;CL:0002308,1.81e-07,2;CL:0002140,1.81e-07,2;CL:0002327,6.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;4.04e-10;3!CL:0000357;1.21e-08;6!CL:0000114;1.21e-08;6!CL:0000223;6.93e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.47e-12!72;UBERON:0007023!1.88e-10!115;UBERON:0000166!3.91e-10!21;UBERON:0004119!5.92e-10!169;UBERON:0000925!5.92e-10!169;UBERON:0006595!5.92e-10!169;UBERON:0000161!1.50e-08!35;UBERON:0000065!3.16e-08!53;UBERON:0000165!5.09e-08!28;UBERON:0000930!5.09e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.82e-12;15!UBERON:0001558;3.82e-12;15!UBERON:0000165;1.09e-11;28!UBERON:0000486;2.68e-11;12!UBERON:0003126;5.40e-11;7!UBERON:0001005;5.40e-11;7!UBERON:0004815;2.96e-10;3!UBERON:0002031;2.96e-10;3!UBERON:0001949;6.49e-10;3!UBERON:0000161;1.14e-09;19!UBERON:0000166;1.14e-09;19!UBERON:0000365;1.50e-09;5!UBERON:0005910;5.79e-08;6!UBERON:0002419;1.78e-07;2!UBERON:0007771;1.78e-07;2!UBERON:0003297;1.78e-07;2!UBERON:0001821;1.78e-07;2!UBERON:0003487;1.78e-07;2!UBERON:0001820;1.78e-07;2!UBERON:0001708;2.49e-07;4!UBERON:0008895;2.49e-07;4!UBERON:0003127;4.18e-07;2!UBERON:0001003;6.16e-07;15!UBERON:0007376;6.16e-07;15!UBERON:0001911;6.34e-07;4!UBERON:0005178;7.06e-07;34!UBERON:0002224;7.06e-07;34!UBERON:0000153;8.48e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.46e-16,74;UBERON:0000153,1.75e-13,62;UBERON:0007811,1.75e-13,62;UBERON:0003102,3.54e-13,99;UBERON:0000166,8.91e-13,22;UBERON:0007196,3.65e-12,15;UBERON:0001558,3.65e-12,15;UBERON:0004119,2.28e-11,160;UBERON:0000925,2.28e-11,160;UBERON:0006595,2.28e-11,160;UBERON:0000165,3.26e-11,29;UBERON:0000930,3.26e-11,29;UBERON:0003126,5.12e-11,7;UBERON:0001005,5.12e-11,7;UBERON:0000065,1.02e-10,54;UBERON:0000033,1.05e-10,56;UBERON:0004815,2.92e-10,3;UBERON:0002031,2.92e-10,3;UBERON:0000161,5.49e-10,36;UBERON:0001949,6.49e-10,3;UBERON:0000365,1.45e-09,5;UBERON:0001444,3.01e-08,49;UBERON:0000072,3.37e-08,47;UBERON:0005910,5.63e-08,6;UBERON:0003408,9.73e-08,10;UBERON:0001042,1.75e-07,10;UBERON:0009145,1.75e-07,10;UBERON:0002419,1.81e-07,2;UBERON:0007771,1.81e-07,2;UBERON:0003297,1.81e-07,2;UBERON:0001821,1.81e-07,2;UBERON:0003487,1.81e-07,2;UBERON:0001820,1.81e-07,2;UBERON:0005089,1.81e-07,2;UBERON:0005088,1.81e-07,2;UBERON:0005178,2.33e-07,34;UBERON:0002224,2.33e-07,34;UBERON:0001041,2.50e-07,87;UBERON:0001708,2.58e-07,4;UBERON:0008895,2.58e-07,4;UBERON:0008814,3.09e-07,18;UBERON:0003127,3.82e-07,2;UBERON:0005181,4.30e-07,35;UBERON:0001007,5.19e-07,145;UBERON:0001555,5.19e-07,145;UBERON:0007026,5.19e-07,145;UBERON:0001911,6.14e-07,4;UBERON:0005333,6.14e-07,4;UBERON:0008425,6.14e-07,4;UBERON:0005311,6.14e-07,4;UBERON:0001003,6.27e-07,15;UBERON:0007376,6.27e-07,15;UBERON:0007383,6.27e-07,15;UBERON:0006562,9.08e-07,11 | |||
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| ||
|short_description=p1@LTB4R2 | |||
}} | }} |
Latest revision as of 14:28, 19 September 2015
Short description: | p1@LTB4R2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTB4R2_5end |
Coexpression cluster: | C3417_salivary_Corneal_tongue_Bronchial_esophagus_Esophageal_immature |
Association with transcript: | 0bp_to_ENST00000533293, ENST00000543919, NM_001164692, NM_019839, uc001wor.2, uc010alo.2_5end |
EntrezGene: | LTB4R2 |
HGNC: | 19260 |
UniProt: | Q5KU28B4E292Q9NPC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data