FFCP PHASE1:Hg19::chr11:67182815..67182840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57571 | |EntrezGene=57571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29268 | |HGNC=29268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000529925_5end | |association_with_transcript=0bp_to_ENST00000529925_5end | ||
|cluster_id=chr11:67182815..67182840,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CARNS1_5end | |description=CAGE_peak_3_at_CARNS1_5end | ||
|id=chr11:67182815..67182840,+ | |id=chr11:67182815..67182840,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.02e-10;3!CL:0000149;1.24e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.19e-10,3;CL:0000149,1.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.91e-20;82!UBERON:0006241;1.52e-11;3!UBERON:0003057;1.52e-11;3!UBERON:0010122;6.43e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-52!57;UBERON:0005068!1.05e-52!57;UBERON:0006241!1.05e-52!57;UBERON:0007135!1.05e-52!57;UBERON:0005743!6.19e-52!86;UBERON:0007023!1.77e-48!115;UBERON:0000073!1.16e-47!94;UBERON:0001016!1.16e-47!94;UBERON:0001017!1.05e-46!82;UBERON:0002616!1.26e-44!59;UBERON:0003075!1.80e-44!86;UBERON:0007284!1.80e-44!86;UBERON:0002346!1.72e-43!90;UBERON:0000955!7.51e-42!69;UBERON:0006238!7.51e-42!69;UBERON:0002780!8.30e-38!41;UBERON:0001890!8.30e-38!41;UBERON:0006240!8.30e-38!41;UBERON:0001893!1.52e-37!34;UBERON:0002020!1.84e-37!34;UBERON:0003528!1.84e-37!34;UBERON:0003080!1.12e-36!42;UBERON:0002791!6.79e-36!33;UBERON:0001869!4.75e-34!32;UBERON:0003056!4.37e-29!61;UBERON:0002619!1.61e-26!22;UBERON:0000153!7.86e-25!129;UBERON:0007811!7.86e-25!129;UBERON:0000033!1.74e-24!123;UBERON:0001950!2.31e-23!20;UBERON:0000956!9.67e-23!25;UBERON:0000203!9.67e-23!25;UBERON:0000924!3.91e-22!173;UBERON:0006601!3.91e-22!173;UBERON:0004121!4.05e-22!169;UBERON:0002308!3.70e-17!9;UBERON:0000125!3.70e-17!9;UBERON:0002420!6.11e-17!9;UBERON:0007245!6.11e-17!9;UBERON:0010009!6.11e-17!9;UBERON:0010011!6.11e-17!9;UBERON:0000454!6.11e-17!9;UBERON:0003076!9.55e-17!15;UBERON:0003057!9.55e-17!15;UBERON:0000025!5.39e-14!194;UBERON:0009663!1.08e-13!7;UBERON:0004732!1.52e-13!13;UBERON:0002298!5.27e-12!8;UBERON:0004733!7.93e-12!12;UBERON:0002028!7.93e-12!12;UBERON:0007277!7.93e-12!12;UBERON:0000200!1.77e-11!6;UBERON:0000349!7.22e-10!5;UBERON:0000483!9.47e-10!309;UBERON:0000119!1.71e-09!312;UBERON:0004111!5.55e-09!241;UBERON:0001871!1.86e-08!7;UBERON:0000064!2.17e-08!219;UBERON:0000369!2.52e-08!4;UBERON:0002435!2.52e-08!4;UBERON:0000204!2.52e-08!4;UBERON:0010082!2.52e-08!4;UBERON:0000477!1.20e-07!286;UBERON:0002680!3.62e-07!9;UBERON:0001895!3.62e-07!9;UBERON:0010092!3.62e-07!9;UBERON:0002240!5.88e-07!3;UBERON:0001896!5.99e-07!3;UBERON:0005290!5.99e-07!3;UBERON:0010096!5.99e-07!3;UBERON:0000988!6.72e-07!3;UBERON:0006331!7.25e-07!3;UBERON:0002021!8.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.99e-61;34!UBERON:0003528;7.51e-59;34!UBERON:0002020;7.51e-59;34!UBERON:0002791;3.04e-57;32!UBERON:0001869;3.41e-57;32!UBERON:0002780;4.78e-51;41!UBERON:0001890;4.78e-51;41!UBERON:0000073;2.10e-49;53!UBERON:0002616;2.10e-49;53!UBERON:0002619;3.63e-49;22!UBERON:0001950;2.92e-43;20!UBERON:0000956;6.51e-43;25!UBERON:0000203;6.51e-43;25!UBERON:0001017;3.53e-33;75!UBERON:0000955;9.30e-33;68!UBERON:0000125;2.17e-30;9!UBERON:0002308;2.17e-30;9!UBERON:0002420;5.87e-30;9!UBERON:0007245;5.87e-30;9!UBERON:0010009;5.87e-30;9!UBERON:0010011;5.87e-30;9!UBERON:0000454;5.87e-30;9!UBERON:0001016;2.33e-26;83!UBERON:0009663;5.64e-24;7!UBERON:0002298;3.72e-21;6!UBERON:0004732;1.89e-20;13!UBERON:0000200;6.92e-20;6!UBERON:0004733;2.08e-17;12!UBERON:0002028;2.08e-17;12!UBERON:0000349;7.44e-17;5!UBERON:0007023;4.78e-16;114!UBERON:0000369;4.68e-14;4!UBERON:0002435;4.68e-14;4!UBERON:0000204;4.68e-14;4!UBERON:0001871;3.76e-12;6!UBERON:0002021;1.20e-11;5!UBERON:0002240;1.52e-11;3!UBERON:0005174;1.52e-11;3!UBERON:0001137;1.52e-11;3!UBERON:0001896;1.75e-11;3!UBERON:0005290;1.75e-11;3!UBERON:0000988;2.08e-11;3!UBERON:0001872;2.64e-11;5!UBERON:0005383;6.84e-11;3!UBERON:0005382;6.84e-11;3!UBERON:0011216;8.04e-11;132!UBERON:0001870;1.32e-10;3!UBERON:0001781;5.02e-10;3!UBERON:0001782;5.02e-10;3!UBERON:0010314;2.10e-09;132!UBERON:0002680;2.40e-09;9!UBERON:0001895;2.40e-09;9!UBERON:0005162;9.55e-09;2!UBERON:0000122;9.55e-09;2!UBERON:0001897;1.71e-08;2!UBERON:0010225;1.71e-08;2!UBERON:0001875;1.94e-08;2!UBERON:0006514;1.94e-08;2!UBERON:0002148;4.02e-08;2!UBERON:0006331;4.02e-08;2!UBERON:0009662;4.02e-08;2!UBERON:0001873;6.43e-08;2!UBERON:0002771;7.91e-08;2!UBERON:0001876;1.09e-07;2!UBERON:0001954;1.09e-07;2!UBERON:0003022;1.09e-07;2!UBERON:0002421;1.09e-07;2!UBERON:0002600;1.09e-07;2!UBERON:0002702;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.76e-99,56;UBERON:0005068,5.76e-99,56;UBERON:0006241,5.76e-99,56;UBERON:0007135,5.76e-99,56;UBERON:0000073,2.29e-89,53;UBERON:0002616,2.29e-89,53;UBERON:0003075,1.07e-78,82;UBERON:0007284,1.07e-78,82;UBERON:0001017,2.22e-75,81;UBERON:0000955,1.32e-74,68;UBERON:0006238,1.32e-74,68;UBERON:0002346,1.41e-74,86;UBERON:0002780,2.52e-72,41;UBERON:0001890,2.52e-72,41;UBERON:0003080,2.52e-72,41;UBERON:0006240,2.52e-72,41;UBERON:0001893,1.03e-70,34;UBERON:0003528,1.47e-70,34;UBERON:0002020,1.47e-70,34;UBERON:0001016,1.66e-70,89;UBERON:0002791,3.05e-64,32;UBERON:0001869,3.68e-64,32;UBERON:0003056,5.19e-60,61;UBERON:0010371,6.44e-60,104;UBERON:0007023,4.03e-52,114;UBERON:0010314,1.20e-49,132;UBERON:0002619,3.53e-49,22;UBERON:0001950,2.77e-43,20;UBERON:0000956,6.36e-43,25;UBERON:0000203,6.36e-43,25;UBERON:0004121,3.07e-37,171;UBERON:0000924,3.07e-37,171;UBERON:0006601,3.07e-37,171;UBERON:0000125,2.33e-30,9;UBERON:0002308,2.33e-30,9;UBERON:0002420,5.87e-30,9;UBERON:0007245,5.87e-30,9;UBERON:0010009,5.87e-30,9;UBERON:0010011,5.87e-30,9;UBERON:0000454,5.87e-30,9;UBERON:0003076,3.06e-26,15;UBERON:0003057,3.06e-26,15;UBERON:0011216,5.32e-26,223;UBERON:0009663,6.04e-24,7;UBERON:0000025,3.18e-23,192;UBERON:0002298,3.47e-21,6;UBERON:0004732,1.72e-20,13;UBERON:0000200,7.52e-20,6;UBERON:0004733,1.90e-17,12;UBERON:0002028,1.90e-17,12;UBERON:0007277,1.90e-17,12;UBERON:0000349,7.08e-17,5;UBERON:0004111,1.55e-16,240;UBERON:0000483,3.51e-14,306;UBERON:0000369,4.92e-14,4;UBERON:0002435,4.92e-14,4;UBERON:0000204,4.92e-14,4;UBERON:0010082,4.92e-14,4;UBERON:0000119,6.13e-14,309;UBERON:0001781,1.65e-13,4;UBERON:0001871,3.63e-12,6;UBERON:0002021,1.25e-11,5;UBERON:0002240,1.60e-11,3;UBERON:0005174,1.60e-11,3;UBERON:0001137,1.60e-11,3;UBERON:0001896,1.66e-11,3;UBERON:0005290,1.66e-11,3;UBERON:0010096,1.66e-11,3;UBERON:0000988,2.05e-11,3;UBERON:0001872,2.54e-11,5;UBERON:0005383,7.32e-11,3;UBERON:0005382,7.32e-11,3;UBERON:0001870,1.30e-10,3;UBERON:0001782,5.19e-10,3;UBERON:0005424,5.19e-10,3;UBERON:0002680,2.30e-09,9;UBERON:0001895,2.30e-09,9;UBERON:0010092,2.30e-09,9;UBERON:0000966,4.97e-09,6;UBERON:0005388,4.97e-09,6;UBERON:0001802,4.97e-09,6;UBERON:0005162,9.55e-09,2;UBERON:0000122,9.55e-09,2;UBERON:0001897,1.65e-08,2;UBERON:0010225,1.65e-08,2;UBERON:0001875,1.97e-08,2;UBERON:0006514,1.97e-08,2;UBERON:0002148,4.02e-08,2;UBERON:0006331,4.02e-08,2;UBERON:0009662,4.02e-08,2;UBERON:0001873,6.77e-08,2;UBERON:0010122,6.77e-08,2;UBERON:0002771,8.05e-08,2;UBERON:0001876,1.02e-07,2;UBERON:0001954,1.13e-07,2;UBERON:0003022,1.13e-07,2;UBERON:0002421,1.13e-07,2;UBERON:0002600,1.13e-07,2;UBERON:0002702,1.81e-07,2 | |||
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|short_description=p3@CARNS1 | |short_description=p3@CARNS1 | ||
}} | }} |
Latest revision as of 17:56, 19 September 2015
Short description: | p3@CARNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CARNS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000529925_5end |
EntrezGene: | CARNS1 |
HGNC: | 29268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.19e-10 | 3 |
visual pigment cell | 1.27e-07 | 4 |