FFCP PHASE1:Hg19::chr10:15762127..15762149,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:15762127..15762149,-
|short_description=p5@ITGA8
|description=CAGE_peak_5_at_ITGA8_5end
|association_with_transcript=-3bp_to_ENST00000378076_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8516 | |EntrezGene=8516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |HGNC=6144 | ||
|TSSclassifier=strong | |||
|UniProt=P53708 | |UniProt=P53708 | ||
|association_with_transcript=-3bp_to_ENST00000378076_5end | |||
|cluster_id=chr10:15762127..15762149,- | |||
|description=CAGE_peak_5_at_ITGA8_5end | |||
|id=chr10:15762127..15762149,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002556;7.20e-09;6!CL:0000708;1.93e-08;3!CL:0000346;4.05e-08;3!CL:1000428;4.05e-08;3!CL:0002553;4.01e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,5.04e-09,6;CL:0000708,2.08e-08,3;CL:0000346,3.90e-08,3;CL:1000428,3.90e-08,3;CL:0002553,4.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.93e-13;2!UBERON:0004874;2.50e-07;1!UBERON:0003099;2.99e-07;1!UBERON:0003852;2.99e-07;1!UBERON:0010115;3.78e-07;1!UBERON:0000358;5.36e-07;1!UBERON:0006298;5.36e-07;1!UBERON:0005062;7.81e-07;4!UBERON:0007284;7.81e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;5.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-45!115;UBERON:0001049!5.19e-15!57;UBERON:0005068!5.19e-15!57;UBERON:0006241!5.19e-15!57;UBERON:0007135!5.19e-15!57;UBERON:0002616!1.94e-14!59;UBERON:0001017!3.03e-14!82;UBERON:0005743!3.26e-14!86;UBERON:0000955!5.97e-14!69;UBERON:0006238!5.97e-14!69;UBERON:0000073!1.16e-13!94;UBERON:0001016!1.16e-13!94;UBERON:0000153!1.34e-12!129;UBERON:0007811!1.34e-12!129;UBERON:0003075!1.10e-11!86;UBERON:0007284!1.10e-11!86;UBERON:0000033!1.56e-11!123;UBERON:0002346!9.40e-11!90;UBERON:0000475!1.20e-10!365;UBERON:0004121!6.92e-10!169;UBERON:0000924!2.30e-09!173;UBERON:0006601!2.30e-09!173;UBERON:0003080!4.90e-09!42;UBERON:0002780!3.12e-08!41;UBERON:0001890!3.12e-08!41;UBERON:0006240!3.12e-08!41;UBERON:0000477!4.87e-08!286;UBERON:0003076!6.55e-08!15;UBERON:0003057!6.55e-08!15;UBERON:0002619!2.13e-07!22;UBERON:0001893!2.88e-07!34;UBERON:0000062!3.53e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;7.20e-09;6!UBERON:0003672;7.20e-09;6!UBERON:0003210;1.93e-08;3!UBERON:0011137;2.32e-08;11!UBERON:0010323;2.32e-08;11!UBERON:0000412;4.05e-08;3!UBERON:0001992;4.05e-08;3!UBERON:0003129;1.15e-07;7!UBERON:0000989;2.50e-07;1!UBERON:0008811;2.50e-07;1!UBERON:0002146;2.82e-07;1!UBERON:0005623;2.82e-07;1!UBERON:0005705;2.99e-07;1!UBERON:0008193;2.99e-07;1!UBERON:0010912;2.99e-07;1!UBERON:0002514;2.99e-07;1!UBERON:0003457;2.99e-07;1!UBERON:0008907;2.99e-07;1!UBERON:0008001;2.99e-07;1!UBERON:0007213;2.99e-07;1!UBERON:0009891;2.99e-07;1!UBERON:0007914;2.99e-07;1!UBERON:0007375;2.99e-07;1!UBERON:0003323;2.99e-07;1!UBERON:0010258;2.99e-07;1!UBERON:0005253;2.99e-07;1!UBERON:0007842;2.99e-07;1!UBERON:0002397;2.99e-07;1!UBERON:0003113;2.99e-07;1!UBERON:0003277;2.99e-07;1!UBERON:0001709;2.99e-07;1!UBERON:0002244;2.99e-07;1!UBERON:0005620;2.99e-07;1!UBERON:0010364;2.99e-07;1!UBERON:0004288;2.99e-07;1!UBERON:0002363;3.78e-07;1!UBERON:0001736;5.36e-07;1!UBERON:0001301;5.36e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,5.04e-09,6;UBERON:0003672,5.04e-09,6;UBERON:0010323,1.80e-08,11;UBERON:0003210,2.08e-08,3;UBERON:0000412,3.90e-08,3;UBERON:0001992,3.90e-08,3;UBERON:0003129,8.50e-08,7;UBERON:0000989,2.50e-07,1;UBERON:0008811,2.50e-07,1;UBERON:0006258,2.50e-07,1;UBERON:0005876,2.50e-07,1;UBERON:0004874,2.50e-07,1;UBERON:0002146,2.82e-07,1;UBERON:0005623,2.82e-07,1;UBERON:0005705,2.99e-07,1;UBERON:0008193,2.99e-07,1;UBERON:0010912,2.99e-07,1;UBERON:0002514,2.99e-07,1;UBERON:0003457,2.99e-07,1;UBERON:0008907,2.99e-07,1;UBERON:0008001,2.99e-07,1;UBERON:0007213,2.99e-07,1;UBERON:0009891,2.99e-07,1;UBERON:0007914,2.99e-07,1;UBERON:0009292,2.99e-07,1;UBERON:0003099,2.99e-07,1;UBERON:0007375,2.99e-07,1;UBERON:0003323,2.99e-07,1;UBERON:0010258,2.99e-07,1;UBERON:0007842,2.99e-07,1;UBERON:0009494,2.99e-07,1;UBERON:0010042,2.99e-07,1;UBERON:0010045,2.99e-07,1;UBERON:0010259,2.99e-07,1;UBERON:0010359,2.99e-07,1;UBERON:0009526,2.99e-07,1;UBERON:0002397,2.99e-07,1;UBERON:0003113,2.99e-07,1;UBERON:0003277,2.99e-07,1;UBERON:0001709,2.99e-07,1;UBERON:0004066,2.99e-07,1;UBERON:0002244,2.99e-07,1;UBERON:0005620,2.99e-07,1;UBERON:0004362,2.99e-07,1;UBERON:0010364,2.99e-07,1;UBERON:0010046,2.99e-07,1;UBERON:0005868,2.99e-07,1;UBERON:0007238,2.99e-07,1;UBERON:0004288,2.99e-07,1;UBERON:0004068,2.99e-07,1;UBERON:0010334,2.99e-07,1;UBERON:0003852,2.99e-07,1;UBERON:0010253,2.99e-07,1;UBERON:0002363,3.78e-07,1;UBERON:0007645,3.78e-07,1;UBERON:0007647,3.78e-07,1;UBERON:0010115,3.78e-07,1;UBERON:0001301,4.25e-07,1;UBERON:0001736,5.69e-07,1;UBERON:0006298,5.69e-07,1;UBERON:0007023,9.34e-07,114 | |||
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| ||
|short_description=p5@ITGA8 | |||
}} | }} |
Latest revision as of 08:49, 17 September 2015
Short description: | p5@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGA8_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 5.04e-09 | 6 |
leptomeningeal cell | 2.08e-08 | 3 |
hair follicle dermal papilla cell | 3.90e-08 | 3 |
stem cell of epidermis | 3.90e-08 | 3 |
lung fibroblast | 4.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.78e-07 | 1 |